These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3066 fasta sequence [CAGTAGGAGGTCACTGCACTAGCCCACATGCCGCTGCAGTAGCTAGTCGTCGTAGCAGCAGCAGTATACTACTAGTAGTAGCCTTCTTGGCCTTCTTCTTCTTCTTCTTGCACAGATCTTGGGGGCGCAATCAGCCAGTTGCAGGCTTGCAGCAGACGAACCTCGGAGAGAGAGGCCTGCGTTCTTGCGAAAGAGGAGCTAGAGCTTCAGGATAAAGCAGACACCAATTCCTCAAGGAAACAAGTTCTTAAATTGACACCTCCTTCATAAACTATTTTATAAAGATTCAAAGATAATAGAATAGAGAAAATGCATCAAGACAGTTTCAGGTCGGTGGTTTGCAGATCCCTTTCAAAGAGTCTTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAAAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGGATACCAAGTCTAAAACAGGATCAGCATCTCGGTCTAGTGCTAATACAGTGAAAAGGCCTGATAAGAAATCAATGATTGCATCAAGTAGCAGCTCTTCAACATGTCGCACAAGGAAGCCGGTCGCACGTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTTCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACACACTTAGTATCAAAAAATGAAGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA-CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAATTTCGATGAATGAACAATGCCGAGGAATCGCAAATAGCAATGAGCAAGGACAGTTCTTGTTTTCATTTCTTTTTTTTTTAAAAAAAAGCTAGTTGAATACCCGTATGTTATAAAGGGTCACGCTCATATAATTAGGGACGGATTAGACGGGTGATTGATGATACAATATTGGATCTGGTGGTTACTTTTTACAAACGAGAACACACGTACATTGAGAGGAGGAAATAAAAGGAGAAGGGCCCCATTTTTAAAGTAGTAACTAGCATTGAGAGTAGGAAATAAAATGAGGACAGTTGTGTTTGCTAGGGGAGGATGGGAAAATGCACACTACGCTCGGAAGGCGAAGTAGTCTATTAGCGTCTATTAGCGCGTGATTAATTAAGTATTAGTTATTTTTTTAAAAAAAAATTGGGGCAATA] [+] EMBL AK065657 [CAGTAGGAGGTCACTGCACTAGCCCACATGCCGCTGCAGTAGCTAGTCGTCGTAGCAGCAGCAGTATACTACTAGTAGTAGCCTTCTTGGCCTTCTTCTTCTTCTTCTTGCACAGATCTTGGGGGCGCAATCAGCCAGTTGCAGGCTTGCAGCAGACGAACCTCGGAGAGAGAGGCCTGCGTTCTTGCGAAAGAGGAGCTAGAGCTTCAGGATAAAGCAGACACCAATTCCTCAAGGAAACAAGTTCTTAAATTGACACCTCCTTCATAAACTATTTTATAAAGATTCAAAGATAATAGAATAGAGAAAATGCATCAAGACAGTTTCAGGTCGGTGGTTTGCAGATCCCTTTCAAAGAGTCTTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAAAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGGATACCAAGTCTAAAACAGGATCAGCATCTCGGTCTAGTGCTAATACAGTGAAAAGGCCTGATAAGAAATCAATGATTGCATCAAGTAGCAGCTCTTCAACATGTCGCACAAGGAAGCCGGTCGCACGTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTTCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACACACTTAGTATCAAAAAATGAAGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGGCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTAGCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAAT ] [+] EMBL CB620576 [ TTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAGAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGA ] [+] EMBL CB629761 [ AACCGTTTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCC ATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGG ] [+] EMBL AK058920 [ GTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTCCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACAC ] [-] EMBL CB620577 [ AGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATGTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGTTATAAGGGCATGATGAATAGACAAAG ] [-] EMBL CA760128 [ TAAAGGTATCCGCAAGGCCCAGATGGGTACCCATGAGCTTTTCGTGGACACCGCANCAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTNGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAAT ] [-] EMBL CA760127 [ GATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCACCCAT CTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATTTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAAAGCA TTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAA ] [-] EMBL CB637470 [ GCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGGCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTAGCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTTTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAAg ] [-] EMBL CB629760 [ GTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCACTTTTTCCTTTCGATGAATGAACAATGCCGAGGAATCGCAAATAGCAATGAGCAAGGACAGTTCTTGTTTTCATTTCTTTTTTTTTTAAAAAAAAGCTAGTTGAATACCCGTATGTTATAAAGGGTCACGCTCATATAATTAGGGACGGATTAGACGGGTGATTGATGATACAATATTGGATCTGGTGGTTACTTTTTACAAACGAGAACACACGTACATTGAGAGGAGGAAATAAAAGGAGAAGGGCCCCATTTTTAAAGTAGTAACTAGCATTGAGAGTAGGAAATAAAATGAGGACAGTTGTGTTTGCTAGGGGAGGATGGGAAAATGCACACTACGCTCGGAAGGCGAAGTAGTCTATTAGCGTCTATTAGCGCGTGATTAATTAAGTATTAGTTATTTTTTTAAAAAAAAATTGGGGCAATA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||