These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11707#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1520 fasta sequence [TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG-ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT] [+] EMBL AK059263 [TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGGCTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTCTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTA ] [+] EMBL AK065593 [ TTTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTAT ] [+] EMBL CB657733 [ TTCTCTCTCCTCCTCCTCACCGTCGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCACCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGCGGTCACTCGCCCTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAGCCGGTGGCGGAGGCGGCGCCAAGGACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCTCCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCAACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGATCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCCCATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCTCATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCGCTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCAATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGATGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAGAATC ACANGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGNGGA ] [-] EMBL CB657734 [ GGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAAG ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCAT ] [-] EMBL CB654191 [ ATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAACAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGAGGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAGATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCACTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGACAGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCATTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATAATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAGTGAGATTGCAAATGCTGGCAATTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAATGTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTGGTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGGCCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCCCTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT] consensusID : consensus_11707#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1511 fasta sequence [TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGGCGATCGCCGGAGCAGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGCGGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGGGGAGGAGGGCTCTCCGGCCTCCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAGCCATCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAATTGAGATTATGCA] [+] EMBL AK072039 [TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGGCGATCGCCGGAGCAGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGCGGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGGGGAGGAGGGCTCTCCGGCCTCCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAGCCATCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAATTGAGATTATGCA] [+] EMBL AK070451 [ TCATACGCAAACAAGTAAACATGGTGAGAGTGGTGGGAGCAACTCTGGTGGATCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTTCATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCTCATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCTCTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCCATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGATGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCTGACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCATCAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGAGGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATGGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAA ] [+] EMBL AU100664 [ GGCCATCCCATCAGTGGGCCAACTTTTACTNTTACAAAATGCAGACAATANGTGACATATATTTCATNGGAGGTTTTGGCACTGTTGCTTGGNTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAGATTNCGACTGNTGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCTTTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGATAGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCCTTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATATTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATTCATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAATTTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAAGGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCAATTCNCTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAATATCCAAAAATGGTTTGACAAaaaa ] consensusID : consensus_11707#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 361 fasta sequence [CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGNTCTGNCCATGNCTATGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGGGCTTCCTCGCCAGCGGCGCCGAAGAGGACGAAGAGGGGAGGAGGGTCTNCGGCCTCCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAGCCATCATACGTAAACAAGTAAACATGGGTGAGAGTT] [+] EMBL C26133 [CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGCCGCCGNTCTGNCCATGNCTATGCGTCGCCATCCCCGTCCCGCTCCCTCTCCCGCAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAGCGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGCGCGGGCTTCCTCGCCAGCGGCGCCGAAGAGGACGAAGAGGGGAGGAGGGTCTNCGGCCTCCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAGCCATCATACGTAAACAAGTAAACATGGGTGAGAGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11707#1 TCCGTACGAGATAGGCACGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGC 60 consensus_11707#2 -----------------CGCGCGCTCATGGAGCCACTCGTGCGATCCCCCGTCACATCGC 43 consensus_11707#0 ------------------------TTCCGCCGCGACTTTCTCTCTCCTCCTCCTCACCGT 36 * * ** *** * *** ** * ** ** consensus_11707#1 CGCCGG-CGAT-CGCCGGAGCAGCGTCGCCATCCCCGTCCC------GCTCCCTCTCCCG 112 consensus_11707#2 CGCCGNTCTGN-CCATGNCTATGCGTCGCCATCCCCGTCCC------GCTCCCTCTCCCG 96 consensus_11707#0 CGTCCGGCGGCGCCGCCTCTCCTCTCCGCCCCTCCCGTCCAATGGAGGCTCTCGCCGGCA 96 ** * * * * **** ******* **** * * * consensus_11707#1 CAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAG 172 consensus_11707#2 CAGAAGAGCCCCTCCGGACGCCGCGGCCTTCCCTAAGCCCTGGGTGATCCCTTCCTCCAG 156 consensus_11707#0 CCGCCGCCGCCTCCCTGCCGGCCTTGCCTTCCCACCAGCCGCGGTCCCGCCTGGCCCCGC 156 * * * ** ** * ** * ******** ** *** *** * ** consensus_11707#1 CGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGC-GCGC 231 consensus_11707#2 CGTCAAATCCGCCGCGTGCTTGCAGCTGCAGCAGGCGCGCGCTCCCCGCCGATGC-GCGG 215 consensus_11707#0 GGTCA--CTCGCC-CTTCCCGGCGGCCGCTCGTGCTGCGGGCCCCTCCGCGCCGCCGCAG 213 **** **** * * * ** ** ** * *** ** ** * ** ** ** consensus_11707#1 GGCTCCTCGCCAGCGCCGCCGAAGGAGGACGAAGAGG--GGAGGAGGGCTCTCCGG-CCT 288 consensus_11707#2 GCTTCCTCGCCAGCGGCGCCGAAG-AGGACGAAGAGG--GGAGGAGGG-TCTNCGG-CCT 270 consensus_11707#0 CCGGTGGCGGAGGCGGCGCCAAGG-ACGACGCGCAGGCTGGCGTCACGCCCAACGGGTCT 272 ** *** **** * * * **** *** ** * * * *** ** consensus_11707#1 CCTCCAGTGATGCGGATGACCAGGCGGAAGCCTTGCCCTTCCTCGAGAGTGATAG--CCA 346 consensus_11707#2 CCTCCAGTGATGCGGATGACCAGGGTGACTNTTGNCCTTTCCTTGAGAGTTATAG--CCA 328 consensus_11707#0 CCCGTTATCAAGCCGAAGAGTGACTCGGCTCTTTCGAGTCAGAATGGAGTTCTTGGATCA 332 ** * * ** ** ** * * * **** * * ** consensus_11707#1 TCATACGCAAACAAGTAA-ACATGG-T------GAGAGTGGTGGGAGCAACTCTGGTGGA 398 consensus_11707#2 TCATACGTAAACAAGTAA-ACATGGGT------GAGAGTT-------------------- 361 consensus_11707#0 ACCAAAACTGACAAGCCACACACGACCTTATCAACGCATACTACCACTGACTCGAGTGGA 392 * * ***** * *** * * * consensus_11707#1 TCTAGAGCCGGCCTATTCAGAACACCAATTTCAGGGGGCGTACACACTGCGACTTCTGTT 458 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 TCCAGAGCTGGCTTGTTTAGAACACCTATATCTGGTGGTGTGCAGAGTGCGACTTTTGCC 452 consensus_11707#1 CATGATTTACCCCCACCGGCTCGAGCTGTTCGCAATCTGATGGAGCAGGCACGGTTTGCT 518 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CATGGTCTACCTCCGCCGGCATTGGCTGTTCGCAACTTGATGGAACAGGCGCGGTTTGCT 512 consensus_11707#1 CATCTGTGTACTGTCATGTCTCGGATGCATCATCGACGTGCAGGATACCCGTTTGGTTCT 578 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CATCTGTGCACTGTCATGTCTGGCATGCATCATCGGCGTACTGGATACCCATTTGGTTCG 572 consensus_11707#1 CTAGTGGATTTTGCACCTGATCCAATGGGACACCCCATTTTTTCACTGTCCCCTTTAGCC 638 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CTTGTTGATTTTTCTAATGACTCGATGGGCCATCCAATATTTTCACTATCACCGTTAGCA 632 consensus_11707#1 ATCCACACAAGGAATCTTCTGGAAGATCCGAGGTGCACAGTCGTTGTACAGGTGCCTGGA 698 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 ATACACACAAGGAACTTGCTCTCTGACCCAAGATGCACACTTGTTGTCCAGGTACCTGGA 692 consensus_11707#1 TGGAGTGGACTGTCAAATGCACGTGTAACAATTTTTGGTGATGTTGTTCCCTTGCCTGCT 758 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 TGGAGTGGACTGTCAAATGCACGTGTCACAATATTTGGTGATGTATATCCTTTGCCAGAA 752 consensus_11707#1 GACCTGCAGGAATGGGCTCATCAACAGTATGTTTTGAAGCACCAACAGTGGGCATCCCAT 818 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 GATCAACAGGAGTGGGCACATAAGCAGTATGTTGCAAAACATCAACAATGGGCATCTCAA 812 consensus_11707#1 CAGTGGGGCAACTTTTACTATTACAAAATGCAGACAATAAGTGACATATATTTCATTGGA 878 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CAGTGGGGAAATTTTTACTATTACAGGATGCAGAACATAAGCGACATATACTTCATTGGA 872 consensus_11707#1 GGTTTTGGCACTGTTGCTTGGTTAGATGTGAAAGAATACGAGGCTCTCAAACCTGATAAG 938 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 GGCTTTGGCACTGTTGCATGGGTAGATGTCAAGGAGTATGAAGCTATTCAACCCGACAAG 932 consensus_11707#1 ATTGCGACTGATGGTGGGGAGCAAAGTTTAAAGGAACTTAATGCAATGTACTCAAAGCCT 998 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 ATAGCAGTTGATGGTGGTGAACAAAGCTTAAAGGAGCTGAATGCAATTTTCTCGAAGCCA 992 consensus_11707#1 TTGAAAGAGCTTTTATCAACCGAAATAGAGGTAGATGATGCAGCTCTTATATCAATTGAT 1058 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CTTAGAGAGTTCTTGTCATCAGAAGGGGAGGTTGATGATGCTGCACTTATATCAGTAGAC 1052 consensus_11707#1 AGCAAAGGTATTGATATACGAGTTCGACAAGGTGCACAGTTCAACATCCAGAGGATAGCC 1118 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 AGCAAAGGGATAGATATAAGGGTTCGCCAGGGTGCACAGTTCAACATTCAGAGGCTGGCA 1112 consensus_11707#1 TTTGAGCTGCATTACAGCGTAGAAACACTTGAAGAAGCCAAGGAAGCGATTAGGAGGATA 1178 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 TTTGATGTACCTCACAAGGTGGAGACACTAGAGGAAGCCAAGAGAGCACTCCACAAGATA 1172 consensus_11707#1 TTAGGCAAATCAAGATGGCATGCCAAATTTTAGACTTCCTTCAAATCTGAATGATGAATT 1238 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 ATCAAGACAACCAGCAAATAAAGTCTTCAAAAGAAAAG-TGAGATTGCAAATGCTGGCAA 1231 consensus_11707#1 CATGGATGGAAACTATCAAGCGCCTGAATCCTGTAAAATATTTGTATATACTCATGTAAT 1298 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 TTTCCACTCTCCTGCAACTGTTTTGTGACCCGATAAAAAGTATTTTAAGCATCATGTAAT 1291 consensus_11707#1 TTTTGACTTTGTGGTGTGCCAGATGGAATAAGGGAATTCCATTTCACTCTTGTGTTACAA 1358 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 GTAGCAATAAGTGATGTTTATCAGTTTAATAATGACTTACTTGAGAATTAACATCCTGTG 1351 consensus_11707#1 GGGCCTAAAAGGCCTGAAGACTAAGGATAGAGTCAAATGTTATTAGCTTCTGTACAGTCA 1418 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 GTTAGAATTCTAGGTGTTTGCAAGAATGTGTATGCTCTCATGCTGCTAGAGCAGCAATGG 1411 consensus_11707#1 ATTCACTTCTAGTGCTGGGTTTGATAGGAAACGAAGTACATGCAGCTAACAAAATGTAAT 1478 consensus_11707#2 ------------------------------------------------------------ consensus_11707#0 CCTTGAGGCTTTTTTGTGGAAGCTAGATGCTTTGTATCGGTGGACCTAATGGTTGATGCC 1471 consensus_11707#1 ATCCAAAAATGGTTTGACAATTGAGATTATGCA---------------- 1511 consensus_11707#2 ------------------------------------------------- consensus_11707#0 CTCATATTGGGATGCAATTTTGACCGTTAAGCATCAACATGGCTCATTT 1520 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||