These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11708#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2744 fasta sequence [CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT] [+] EMBL AK101037 [CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT] [+] EMBL AK101757 [CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAGCCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAGATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCGAGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAATTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTAAAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCAGATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTTATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATGGTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATTGAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAGAAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCCGAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTCGGTGGTTTTAGCTCCAAGTATGGTTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTGTGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCCTTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT] [+] EMBL CB638992 [ CGTCCGCCGGTGCTCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGCGGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGTAT CTCTTTTCCGGCAACTGCAGCTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCTGTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGTGGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAA ] [+] EMBL CF323875 [ TTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAG ] [+] EMBL CF322601 [ TTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGTCAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACATAGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAG ] [+] EMBL CB645277 [ CAGCCTTGACAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCTGAAGGATGTCCATGGCGTATACATGCCTCCAAGTCTCCTGCAAAGAAGGATTTCATGATTAAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCGTCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGGCCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAAGCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGCAACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACAGTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAAGGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAACAAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTTGCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTAAAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTGTTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAAC ] [-] EMBL CB645278 [ AGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTTTCAAG ] [-] EMBL CB669114 [ TATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGTTGTGCCTGTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAACCTGTGCAATGCCATCATGTA ] consensusID : consensus_11708#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 808 fasta sequence [GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGGTTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT] [+] EMBL CA764865 [GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGATACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGGACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTTACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGCGATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCATGTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCACTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCAATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCGGCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCAGCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGGCACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCAAGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTGTGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGGTTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11708#0 CGGCGGCGGCGGCTGCACGAGCACGAGCACAATCCCCGCGAGCTCCAAACCCTAGCCTAG 60 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 CCGCACGCGCGCGCGCCCGCCGCGCGCCACGGTGGCCGGCGGCGCTCCGTCCGCCGGTGC 120 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 TCGCGGGCTGGGAGGTGAGGCCGTGATTTGGGGGGTGTTCCTGGCGGCGGCGGCGGCGGC 180 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GGCGTGGGTGGTGAGGGAGCGGAGGCGCGACTACTGCATCCCCGACTCCGGCAACTGCAG 240 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 CTGTGGAAGCTTCACCGTGGCCGGAAAGTGTAAGTCATGGGGAGCAAACAGATAGTAGCT 300 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GTTCTTCAAGTAGGTGGAGAATTCAAAACTGATGATGATGGACAGATGTCCTATTCTGGT 360 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GGAGAGGCGCACGCGATGCATGTGAAAAGTGATTGGACTTTTAAAACATTCAAACATGAG 420 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 ATATCTTCAACGCTCAATAACCTCAAACTTGACTCCTATGTGTTCAAGTACTTCCTTCCG 480 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AGGAATAACAAGACTTTGATTTCAATTTCCAATGACAAAGACCTAAAACGCATGGTTGAA 540 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 TTCCATGCAGAGTCAGAGACAACATATATTTATGTCATGAAGAAGGCTGACAACAGGGTA 600 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AAAACATCTGCCGTGGTGCCTGCTGCTTCTGCAGATCATGCTGTAGCAGCAACTACTCCA 660 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GATGGATCTAAGAGGCAAAAGATTTGTGCAAGTTGGGAGAATGCGATTACTGGAGCTGGT 720 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 CAAGTGTTTGAAGGTCCAAAGGAATTCCGTGATGCACTACACAAGTATGCCATTGCACAT 780 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AGGTTCCATTACAGATTTGTCAAGAATGACTCTTCTCGTGTCACTGTGGAATGTACCGCT 840 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GAAGGATGTCCATGGCGTATACATGCATCCAAGTCTCCTGCAAAGAAGGATTTCATGATT 900 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AAGAAAGTTTTTGGAAGTCATACATGTGAATCAGAGTCAGTCAAAAGTCATCGTCTAGCG 960 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 TCTCAAAAGTGGGTGGCCAGTGTTATTAAGGAAAAATTGCGTGATAGTCCAAACTATAGG 1020 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 CCAAGAGATATTGCTAATGATCTTCAGCGGGAATATGGGCTAAGCCTGAATTACTCCCAA 1080 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GCTTGGCGAGGCAAATCAATAGCCCAGAAAGAACTATACAGTTCACATGAAGAGGCATGC 1140 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AACCAGCTTCCTTGGTTTTGCCAAAGGATTGTCGAGACAAACCCTGGAAGTGCGGCAACA 1200 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GTAGAGGCCTTGGAAGATTCAAAATTCCGCTTCTTTGTTGCATTTCATGCCTCCATTCAA 1260 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GGTTTTGTGCATGGCTGCAGACCTCTCCTCTTTCTTGATGTGATATCTGTGAAACCGAAC 1320 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AAGCATTGGAAGCTGTTGGCTGCTACCTCAGTTGATGGTGAAGGCGATATGTTCCCAGTT 1380 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GCACTCTCTGTAGTGGACGACGAGAGTCAAGAAAATTGGCATTGGTTTCTTGAACAGCTA 1440 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AAAGCTTCATTGCCTGTGTCTGGAGAACTAACATTCATATCAAATGGCAAATGTGGTCTG 1500 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 TTGGATGAGGTCTCTCTTATATTTCCAGATAGCTATCATGGCTACCATGTCAACTATTTT 1560 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 ATTGAAGAATTTAAGGCACAATTGGATGACAGTTGGAGTGAAGAACTAAAAGATACAATG 1620 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GTTGAGCATGTTAAGAAAGCCATGTATTCATGCAAAGTTGATGAATTCAACCAGTGTATT 1680 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GAACTCATCAAAGTTGAATCTGATAAGCTTGCTGAATGGCTTTTGGAGACTAAACCTGAG 1740 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 AAGTGGTCAGATGCCTTCTTCAAGGGGTCGCGACTTGGCCAGTACACCTGCAATGTTCCC 1800 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 GAGACAATTCTTCAGTGGGTCCCCAGTAGATATGAGCTCTCAGTAGTGCAGTTGGTTGAT 1860 consensus_11708#1 --------------GACGAGACAAGGGGGATATGAGCTCTCAGTAGTGCAGTTGGTTGAT 46 * * * * ******************************** consensus_11708#0 ACAATCAGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGG 1920 consensus_11708#1 ACAATNGGATGCAACTTGATGGAGATGATGTATACGCGCAGGGAATATTCGAATTCATGG 106 ***** ***************************************************** consensus_11708#0 ACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTT 1980 consensus_11708#1 ACGGAACCGCTAACTCCATCAACCAATCAGAAAATTCAGGAAGAGATGGGCAAAGCTCTT 166 ************************************************************ consensus_11708#0 ACACACAGTGTTGTTTGCTCAACAGGCAATGACGGAAACAATAATGTGTTTGAGGTATGC 2040 consensus_11708#1 ACACACAGTGTTGTTTGCTCAACAGGCANTGACGGAAACAATAATGTGTTTGAGGTATGC 226 **************************** ******************************* consensus_11708#0 GATGGCGCTGTCAATGTTGTCAACATTGATACATGGGACTGCACCTGCAGAAAGTGGCAT 2100 consensus_11708#1 GATGGCGCTGNCAATGTTGTCAACATTGATACACGGGACTGCACCTGCAGAAAGNGGCAT 286 ********** ********************** ******************** ***** consensus_11708#0 GTCTCTGGGATCCCATGCTCACATGCAATTGCGGTGTTTGAGCGCACTGATCATAACCCA 2160 consensus_11708#1 GTCTCTGGGATCCCATGCTCACATGCAATTGCGGNGTTTGAGCGCACTGATCATAACCCA 346 ********************************** ************************* consensus_11708#0 CTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCA 2220 consensus_11708#1 CTTGACTTCTGTGCCAAGTATTTCACAACAGAGTGCTACCGCTTGACCTATGCCATGTCA 406 ************************************************************ consensus_11708#0 ATCAATCCAATACCTGACATTGTTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGAG 2280 consensus_11708#1 ATCAATCCAATACCTGACATTGNTGTGGCTGCTCCATCAACTGACCCATCACAAGGCGCG 466 ********************** *********************************** * consensus_11708#0 GCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGGAAGACCAAAGGAAAAGCCA 2340 consensus_11708#1 GCATTACATCAATCACCGATTCTAACCCGGAGGCAGGTTGNAAGACCAAAGGAAAAGCCA 526 **************************************** ******************* consensus_11708#0 GCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGGTTATGGG 2400 consensus_11708#1 GCTGATCCTCGAATCGCAATCAAAAGGGCGGTGCGCTGCAGCAGGTGTAAGGNTTATGGG 586 **************************************************** ******* consensus_11708#0 CACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCA 2460 consensus_11708#1 CACAACAAGGCAACCTGCAAAGTCCCTATCGCAGCATAAAACCCTTGCCATATGTTCTCA 646 ************************************************************ consensus_11708#0 AGTGTAAATTATGTTGTGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGAA-CCTG 2519 consensus_11708#1 AGTGTAAATTATGNTGNGCCTTTTGTTGCCCTTTTATGAACTCGTTCTAGTGGNAACCTG 706 ************* ** ************************************ * **** consensus_11708#0 TGCAATGCCATCATGTATCTTTTATCAGATAACGTGTGAAACATAATCTTATTC-GGTGG 2578 consensus_11708#1 TGCAATGCCATCATGTATCTTTTATCAGATAACGNGTGAGACATAATCTTATTCCGGNGG 766 ********************************** **** ************** ** ** consensus_11708#0 TTTTAGCTCCAAGTATGG-TTTGCCTAGCACTAGCCGGTACTTTTAGATTGAACTTTTTG 2637 consensus_11708#1 TTNTAGCTCCAAGTATGGGTTTGCCTAACACTAGCGGGTACT------------------ 808 ** *************** ******** ******* ****** consensus_11708#0 TGGTGGGCAGAATCTGGGAAAAGGATTGGAGTTTTTTGTACGTTGTTATCCAGCACTCCC 2697 consensus_11708#1 ------------------------------------------------------------ consensus_11708#0 TTCCTCCATATGGTTGTAAATTTTGACATCCGAAGATAAGTTATTTT 2744 consensus_11708#1 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||