|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11716#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2117 fasta sequence
[CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGTGCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAGCAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCATATA]
[+] EMBL AK100160 [CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGTGCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAGCAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCATATA]
[+] EMBL C97314 [ AGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTAATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTTTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGGGGGAGGTGGTTNANTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGCCGTTNTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAAC ]
[+] EMBL C98642 [ cCATATGATCATGATATATGAACCTAGATTGTGGCCTTCCGACCTTCCCCGTAAANCCCTCTGCGCTCTCGCCTTGAGCATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCNTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATNACATGGATTCATGCGTGTACTATTGCCCTAACCTGAANAAGTGGAGAACATNTCATACTTAATGGGATTTCCCTCCATCAGGAGTNAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGATGAGATGAGATGACACCAaaa ]
consensusID : consensus_11716#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1847 fasta sequence
[AATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCT-GGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTA-TCGCGCTCTGCGCTCTCGCCTTGAGC-ATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT]
[+] EMBL AK072343 [AATCATTTGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTGCGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTCGCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGACGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGGCCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCCGGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTACACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCCGTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGGGGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCCTGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCT GGGAAAGAATGTGTTATTTGCCTCTCGGAGCCAAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGTCCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGAGATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAAAGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACACAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAGATTGTGGCCTTCCGACCTTCCCCGTA TCGCGCTCTGCGCTCTCGCCTTGAGC ATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT]
[+] EMBL AU083424 [ GATTGCAGCCGGCCATGCCGACGCCGTACGTCGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGTGGAAGGCGATGCTGATGCCAATGATCCTGGGGAAAGAATGTGTTATTTGCCTCTCGGAGCCA ]
[+] EMBL OSR3228A [ TATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCGGATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCACCCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAACGGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCAGAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTTATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCCTGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCACACAGGCT ]
[+] EMBL AU032025 [ TGTGNCCTTCCGACCTTCCCCGTACTC NGCTCTGCGCTCTCGCCTTGAGCNATGGGGAGGAGATGTAACAGATGTGTACCTTCCAGTNTATGTTAGCATGTAAGCTTCTGGCATAATGTGGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCTTAGATGCCAAGAGGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAGTGGAGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAGATGGACTCCAGATTTGTACAAAAa ]
consensusID : consensus_11716#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 279 fasta sequence
[AANTTTGACCCNGGACCANGNGGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAGTGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAAAGTTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BE228478 [AANTTTGACCCNGGACCANGNGGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAGTGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAA ]
[+] EMBL CA765036 [ gtGGTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAG AAGTGG AGAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11716#0 CCTTCCATTATAGCCCCAAAAATACAGACACACACAAAAAAAAAAGCAGAGAATTTGTGT 60
consensus_11716#1 ------------------------------------------------------------
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GCAAGCATCCCCTTATCGCCTCCCCCCTTGTGTCTCCTATCCTTCGCCGATCGAATCATT 120
consensus_11716#1 -----------------------------------------------------AATCATT 7
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 TGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTG 180
consensus_11716#1 TGAGCTTGTGGGTCTCCTCAACCATATTCGATTCGTGAGGGAGGGGATCGAGCTCTGTTG 67
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTC 240
consensus_11716#1 CGGTGTTGTAGATCATTATCACTCTTGGTTTGTGATTCTCGGAAGTCGGAAGTGTTCTTC 127
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGA 300
consensus_11716#1 GCAAGCTCGATTTTCTTTTTTTTGCGATATTTTTTTGTATCGTTAAATCTCGAATCCCGA 187
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CGGGGGAGGTGGTTGAGTCCGAGTTCGATGCTCCGGGGCCTCAAGATCCAGTCTCGACGC 360
consensus_11716#1 CG---------------------------------------------------------- 189
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CGTTCTTGAGCTCTCCGTGTTGATCTCTGCGCCGCGAAGGGAGATGGGCAACGCCGGTAG 420
consensus_11716#1 ------------------------------------------------------------
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CAACGGCGGAGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGG 480
consensus_11716#1 ---------AGGGGGTTCCCCTGGTCACCGCCGACGAGGCTCCGCCGCCCAGGGCCACGG 240
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCC 540
consensus_11716#1 CCACCATCAGGTCCACGGCCACCACCACCAGCCGTCCTCGCCTCCCCCGCCTCCGCCGCC 300
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTA 600
consensus_11716#1 GGAGTCGTCCCCGAGCCACTACGTGTTCGCCGCCGCCACGCCGTACCCTCCGCCGCAGTA 360
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCC 660
consensus_11716#1 CACCAACCCCAACCTGCCGCGGTACTACCCTCAGTACGGGAACTACTACCCGCCGCCGCC 420
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGG 720
consensus_11716#1 GTCCCTGCAGGTGCCCCTCCCGGCGCCGTACGACCACCACCACAGGGGCGGCGGCGCGGG 480
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCC 780
consensus_11716#1 GGTGCCCGCCGGAGGGGAGTTCCCGCCGTCGGCGCACCCGCAACACTACCCGGGGTGGCC 540
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 TGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGT 840
consensus_11716#1 TGGGGTCTCTGGGCGGCCGCACCCCTGCGGATTGCAGCCGGCCATGCCGACGCCGTACGT 600
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCG 900
consensus_11716#1 CGAGCACCAGAAGGCTATCACAATCCGCAACGACGTCAACCTCAAGAAGGAGACTCTTCG 660
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCAC 960
consensus_11716#1 GATTGAGCCTGATGAGGAGTGCCCGGGCCGCTTCCTCGTCGCCTTCACCTTTGACGCCAC 720
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAAC 1020
consensus_11716#1 CCTTGCTGGAAGCATGACTGTTTACTTCTTTGCAAAAGAAGAGCTCAACTGCAATCTAAC 780
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCA 1080
consensus_11716#1 GGCGGTGAAAGAAGACCTGATTAAGCCTGTTACTGTAAGCTTCAAAGAGGGTCTTGGTCA 840
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTT 1140
consensus_11716#1 GAAGTTCAGACAGCCTTCTGGCACTGGAATCAACTTCTCCGTGTTTGAGGATTCCGAGTT 900
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 ATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCC 1200
consensus_11716#1 ATTGAAGCAGGGGGACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACCATGCC 960
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 TGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCAC 1260
consensus_11716#1 TGTTGATCAAAAGTTGGAAGGAGAAGATCAAAAGATGAAAACTCCAAACTCACAGATCAC 1020
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 ACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGAT 1320
consensus_11716#1 ACAGGCTCTGTTTGAAAAGAAAGAAAGCGGTGATTATCAAGTTCGAGTTGCTAGCCAGAT 1080
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGT 1380
consensus_11716#1 CCTTTGGGTCAATGGAACTAGGTATGAGTTGCAGGAAATATATGGAATAGGAAACTCGGT 1140
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCC 1440
consensus_11716#1 GGAAGGCGATGCTGATGCCAATGATCCTGGGAAAGAATGTGTTATTTGCCTCTCGGAGCC 1200
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 AAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGT 1500
consensus_11716#1 AAGGGATACTACCGTTCTCCCATGTAGGCATATGTGTATGTGCAGCGAGTGTGCCAAGGT 1260
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGA 1560
consensus_11716#1 CCTGAGGTACCAGACGACCCGGTGCCCGATCTGCCGACAGCCCGTTGAGCGGCTACTTGA 1320
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAA 1620
consensus_11716#1 GATCAAAGTCAACAACAAAGCTGAAGAGCAGCAGCAGCCGTCACCCGATTCACCGATCAA 1380
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 AGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACA 1680
consensus_11716#1 AGTCAACAGCAAAGCCGAAGAGCATCAGCAGCAGCCATCCCAATCGCTGCCAATCCCACA 1440
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 CAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAG 1740
consensus_11716#1 CAGGGAAGAGGTGTAGCTGCGACAATGTCGGGCGCATATGATCATGATATATGATCCTAG 1500
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 ATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAG 1800
consensus_11716#1 ATTGTGGCCTTCCGACCTTCCCCGTATCGCGCTCTGCGCTCTCGCCTTGAGCATGGGGAG 1560
consensus_11716#2 ------------------------------------------------------------
consensus_11716#0 GAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGT 1860
consensus_11716#1 GAGATGTAACAGATGTGTACCTTCCAGTGTATGTTAGCATGTAAGCTTCTGGCATAATGT 1620
consensus_11716#2 --------------------------------------AANTTTGACCCNGG-ACCANGN 21
* * * * ** * * *
consensus_11716#0 GGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCT-TAGATGCCAAGA-GGAGTGGAGTGG 1918
consensus_11716#1 GGCTTCCTGACCTGACCTGTGTGGGTGAAGGTCT-TAGATGCCAAGA-GGAGTGGAGTGG 1678
consensus_11716#2 GGCTGCCTGACCGTACCTGTGTNGGTGAAGGNCTCNAGATGCCAAGAANGAGTGGAGTGG 81
**** ******* ******** ******** ** *********** ***********
consensus_11716#0 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAA-G 1977
consensus_11716#1 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAA-G 1737
consensus_11716#2 GTGTACCATATACACATCACATGGATTCATGCGTGTACTATTGCCCTAACCTGAAGAAAG 141
********************************************************** *
consensus_11716#0 TGGA-GAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGC 2036
consensus_11716#1 TGGA-GAACATCTCATACTTAATGGGATTTCCCTCCATCAGGAGTAAAAAGAGTTACAGC 1796
consensus_11716#2 TGGAANAACATCTCATACTTAATGGGATTTCCCTCCATCAGGANTTAAAAAAGTTACAGC 201
**** ************************************* * **** *********
consensus_11716#0 AGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTTTGCCTTGAT 2096
consensus_11716#1 AGATGGACTCCAGATTTGTACAAAATTTCCTCATGATTCTCATTATATTTT--------- 1847
consensus_11716#2 AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 261
* * * * * * **** * * * * *
consensus_11716#0 GAGATGAGATGACACCATATA 2117
consensus_11716#1 ---------------------
consensus_11716#2 AAAAAAAAAAAAAAAAAA--- 279
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||