cluster # 11727

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Oryza sativa
cluster # 11727 cluster # 11727 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11727#0 length = 2853 sequences # 8

consensus_11727#1 length = 606 sequences # 1

consensusID : consensus_11727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2853
fasta sequence

                              [GCCCGTCCGTCCGCCCCCGCGCACCACGCGGCGTCTCGTCCTCCTCTCATCGGACCACCAAATTTGCAGCTCGCCTCCACCTCCACCTCCACCTCCACCTCCTCCGCCTCCGCCTCCGCCTCCAAACCCTAGCGCCTCGCCGCCCACCGACCCCCGCGCTTCTCCTCCATCCATGCGCCCCCGTCTCGTCGCCGCCGCCGCCGCCGCCGATCATGGCTGCCTCTAGGGTTTCCCGGGCCCAGCCATGGTGATCTCATCCCCGCCAACGAACCACTCTTCTGCATCGCTTTGTACGATTCGCCCGAGCCTGGATCCCGCCTTCATTGACGCGCCCGCTGTCCGGGAACACCATGATGTCGAGGTTTATGCAAATAGGGAAGAGCAGAAAACTAGTTCATGATGTATTGGTTAACTCGAAACCCAATAGTTTCACTGCACATAACATTGGATCCAACTTTGCGTTCGGTTTGGCACATACAGGCAGGGCCTGTTTGCACGGGAAGGTTCCGCATGGACCGGGCACGTCATCCATGCTTGGAAGAGCAAAGGAGAGTTTATACCGGAATCCAGCTGCAAGAAACTTTTCAGTTCTCTCAACATGTAGCCAGAATGCATTTCATGGTCAACTTGCTTGGAAGCAACTCATGACAATCGGTTCTCATGTACCAAAGGCATCTCCGATTTTAAGTAGGGTTGCTTGTGCCATTAGCTTGGCTGCCACTAGATCTAATTTAGTTCCTTACCTCTTTGCTTTCGTTGCTGGGGAGATAATGCTAGCTCAGAAGACCAGTGCAGACGGAGAGTACTTACCAATTCGTGATAGTCTTTACACGCGTGCTCAAGATGGTCGTATCTATGTCACCTCCTTGATATTTTCAGCAGTAGAGCTGGTCATCATAATCTTCAGATCAATATATTTGGCATTGTTGTTCACTCCAAGTATACTCATGGCCCCATTTGCAGATACTCTTGGCAGTAAGTACAGGAAAACATGGCTCCGTCTTGTGCATCGTACCCTGGAGAAAGCAGGTCCTGCATTTATTAAATGGGGCCAATGGGCTGCTACTCGCCCTGATTTATTTGAAAGTGACCTCTGTGCTGAATTGTCAAAACTACACACAAAAGCACCTGCTCACAGCTTTGCTTATACCAAGAAGACTGTTGAGAAAGCTTTTGGTCGAAAGCTATCTGATCTTTTTGAGAATTTTGAAGAAGAGCCTGTTGCTTCTGGAAGTGTTGCTCAAGTGCACCGAGCTGGTTTGAGATTCCGGTATCCTGGCCAGCATATAAAGCGTGTAACAGTTGCTGTAAAAGTAAGACATCCTGGCGTAGGAGAATCAATACGGAGGGATTTCACTATCATTAATGCAGTAGCTAAAATTTCTAGATATATTCCTACATTGAATTGGTTGCGGCTGGATGAGAGTGTGCAACAGTTTGCTGTCTTTATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCTCATTTGAGCCGGTTTATCTACAACTTCCGAAGGTGGAAGGATGTGTCTTTTCCAAAACCTCTTTACCCACTTGTTCATCCTGCTGTATTGGTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATGACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCCTGAAAATGCTTCTGGTTGATAACTTTGTTCATGCGGATATGCACCCTGGAAATATTTTGGTCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTAGGCCACATGTAGTATTCCTTGATGTAGGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGGAATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGTTATCAAAACAGCAAAACTGCCCAAATCCAAAAGCCTTCATTGA-GGAAGTTGAACGGTCGTTTTCCTTTTGGGGAACCTCTGAAGGTGATGCTGTCCACCCAGCTGAGTGTATGCACCAGTTGCTTGAGCAAGTACGGCGCCATAAAGTAAACATTGATGGGAACGTTTGTACTGTTATGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACAATGTTATGAAAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACT-AAAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGC--TTATGC-ACTCTGC-AGGC-CAAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAATTCATGGATTGCCCATATAACTGAGTGCTTTCGCATTTGTTTGGAATGCAGAAGACTTAACTGTACAAATGTTTGCTGGTAAGCAGGCATAGAGTTTATTTCCAGGTTGCTTCTGCGTTTCAAATTCCTGTCTTATGTTGATACAAAATACTAGCCAAATTCCTCCTTTTATACGTC]

[+] EMBL AK120239             [GCCCGTCCGTCCGCCCCCGCGCACCACGCGGCGTCTCGTCCTCCTCTCATCGGACCACCAAATTTGCAGCTCGCCTCCACCTCCACCTCCACCTCCACCTCCTCCGCCTCCGCCTCCGCCTCCAAACCCTAGCGCCTCGCCGCCCACCGACCCCCGCGCTTCTCCTCCATCCATGCGCCCCCGTCTCGTCGCCGCCGCCGCCGCCGCCGATCATGGCTGCCTCTAGGGTTTCCCGGGCCCAGCCATGGTGATCTCATCCCCGCCAACGAACCACTCTTCTGCATCGCTTTGTACGATTCGCCCGAGCCTGGATCCCGCCTTCATTGACGCGCCCGCTGTCCGGGAACACCATGATGTCGAGGTTTATGCAAATAGGGAAGAGCAGAAAACTAGTTCATGATGTATTGGTTAACTCGAAACCCAATAGTTTCACTGCACATAACATTGGATCCAACTTTGCGTTCGGTTTGGCACATACAGGCAGGGCCTGTTTGCACGGGAAGGTTCCGCATGGACCGGGCACGTCATCCATGCTTGGAAGAGCAAAGGAGAGTTTATACCGGAATCCAGCTGCAAGAAACTTTTCAGTTCTCTCAACATGTAGCCAGAATGCATTTCATGGTCAACTTGCTTGGAAGCAACTCATGACAATCGGTTCTCATGTACCAAAGGCATCTCCGATTTTAAGTAGGGTTGCTTGTGCCATTAGCTTGGCTGCCACTAGATCTAATTTAGTTCCTTACCTCTTTGCTTTCGTTGCTGGGGAGATAATGCTAGCTCAGAAGACCAGTGCAGACGGAGAGTACTTACCAATTCGTGATAGTCTTTACACGCGTGCTCAAGATGGTCGTATCTATGTCACCTCCTTGATATTTTCAGCAGTAGAGCTGGTCATCATAATCTTCAGATCAATATATTTGGCATTGTTGTTCACTCCAAGTATACTCATGGCCCCATTTGCAGATACTCTTGGCAGTAAGTACAGGAAAACATGGCTCCGTCTTGTGCATCGTACCCTGGAGAAAGCAGGTCCTGCATTTATTAAATGGGGCCAATGGGCTGCTACTCGCCCTGATTTATTTGAAAGTGACCTCTGTGCTGAATTGTCAAAACTACACACAAAAGCACCTGCTCACAGCTTTGCTTATACCAAGAAGACTGTTGAGAAAGCTTTTGGTCGAAAGCTATCTGATCTTTTTGAGAATTTTGAAGAAGAGCCTGTTGCTTCTGGAAGTGTTGCTCAAGTGCACCGAGCTGGTTTGAGATTCCGGTATCCTGGCCAGCATATAAAGCGTGTAACAGTTGCTGTAAAAGTAAGACATCCTGGCGTAGGAGAATCAATACGGAGGGATTTCACTATCATTAATGCAGTAGCTAAAATTTCTAGATATATTCCTACATTGAATTGGTTGCGGCTGGATGAGAGTGTGCAACAGTTTGCTGTCTTTATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCTCATTTGAGCCGGTTTATCTACAACTTCCGAAGGTGGAAGGATGTGTCTTTTCCAAAACCTCTTTACCCACTTGTTCATCCTGCTGTATTGGTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATGACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCCTGAAAATGCTTCTGGTTGATAACTTTGTTCATGCGGATATGCACCCTGGAAATATTTTGGTCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTAGGCCACATGTAGTATTCCTTGATGTAGGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGGAATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGTTATCAAAACAGCAAAACTGCCCAAATCCAAAAGCCTTCATTGA GGAAGTTGAACGGTCGTTTTCCTTTTGGGGAACCTCTGAAGGTGATGCTGTCCACCCAGCTGAGTGTATGCACCAGTTGCTTGAGCAAGTACGGCGCCATAAAGTAAACATTGATGGGAACGTTTGTACTGTTATGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACAATGTTATGAAAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACT AAAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGC  TTATGC ACTCTGC AGGC CAAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAATTCA                                                                                                                                                                             ]
[+] EMBL CB626714             [                                                                                                                                                     ACCCCCGCGCTTCTCCTCCATCCATGCGCCCCCGTCTCGTCGCCGCCGCCGCCGCCGCCGATCATGGCTGCCTCTAGGGTTTCCCGGGCCCAGCCATGGTGATCTCATCCCCGCCAACGAACCACTCTTCTGCATCGCTTTGTACGATTCGCCCGAGCCTGGATCCCGCCTTCATTGACACGCCCGCTGTCCGGGAACACCATGATGTCGAGGTTTATGCAAATAGGGAAGAGCAGAAAACTAGTTCATGATGTATTGGTTAACTCGAAACCCAATAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB651821             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTTTTTGAGAATTTTGAAGAAGAGCCTGTTGCTTCTGGAAGTGTTGCTCAAGTGCACCGAGCTGGTTTGAGATTCCGGTATCCTGGCCAGCATATAAAGCGTGTAACAGTTGCTGTAAAAGTAAGACATCCTGGCGTAGGAGAATCAATACGGAGGGATTTCACTATCATTAATGCAGTAGCTAAAATTTCTAGATATATTCCTACATTGAATTGGTTGCGGCTGGATGAGAGTGTGCAACAGTTTGCTGTCTTTATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCTCATTTGAGCCGGTTTATCTACAACTTCCGAAGGTGGAAGGATGTGTCTTTTCCAAAACCTCTTTACCCACTTGTTCATCCTGCTGTATTGGTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATGACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCCTGAAAATGCTTCTGGTTGATAACTTTGTTCATGCAGATATGCACCCTGGAAATATTTTGGTCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTACGCCACATGTAGTATTCCTTGATGTAAGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGGAATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGTTATCAAAACAGCAAAACTGCCCAAATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF292864             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTTCATCCTGCTGTATTGTTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATGACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCCTGAAAATGCTTCTGGTTGATAACTTTGTTCATGCGGATATGCACCCTGTAAATATTTTGGTCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTAGGCCACATGTAGTATTCCTTGATGTAGGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGGAATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGTTATCAAAACAGCAAAACTGCCCAAATCCAAAAGCCTTCATTGA GGAAGTTGAACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB651822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCCAAATCCAAAAGCCTTCA TGAGGGAAGTTGAACGGTCGTTTTCCTTTTGGGGAACCTCTGAAGGTGATGCTGTCCACCCAGCTGAGTGTATGCACCAGTTGCTTGAGCAAGTACGGCGCCATAAAGTAAACATTGATGGGAACGTTTGTACTGTTATGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACAATGTTATGAAAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACT AAAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGC  TTATGC ACTCTGC AGGC CAAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAATTCATGGATTGCCCA                                                                                                                                                                  ]
[-] EMBL CB626715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTTTGTACTGTTATGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACAATGTTATGAAAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACT AAAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCAAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGC  TTATGC ACTCTGC AGGC CAAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGGGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAATTCATGGATTGCCCATATAACTGAGTGCTTTCGCATTTGTTTGGAATGCAGAAGACTTAACTGTACAAATGTTTGCTGGTAAGCAGGCATAGAGTTTATTTCCAGGTTGCTTCTGCGTTTCAAATTCCTGTCTTATGTTGATACAAAATACTAGCCAAATTCCTCCTTTTATACGTC]
[-] EMBL CF292863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTATGGCACCTTAGGGATGCATTGGAATCCACTAAAAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCACGTCTAATTAATAATTGCAGCA TTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCCCAATACCCTGGGATTATCTGC  TTATGC ACTCTGC AGGC CAAAGGATGCGTCCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAAaaaaaaaaa                                                                                                                                                                        ]
[+] EMBL BI813266             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         attgatTCTGCATTTATGCAACTCTGCAAGGCACAAAGGATGCGTTCTCCTCCATG AATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACAAGGGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCAAAAAAAAa                                                                                                                                                                                                     ]




>consensus_11727#0
GCCCGTCCGTCCGCCCCCGCGCACCACGCGGCGTCTCGTCCTCCTCTCATCGGACCACCA
AATTTGCAGCTCGCCTCCACCTCCACCTCCACCTCCACCTCCTCCGCCTCCGCCTCCGCC
TCCAAACCCTAGCGCCTCGCCGCCCACCGACCCCCGCGCTTCTCCTCCATCCATGCGCCC
CCGTCTCGTCGCCGCCGCCGCCGCCGCCGATCATGGCTGCCTCTAGGGTTTCCCGGGCCC
AGCCATGGTGATCTCATCCCCGCCAACGAACCACTCTTCTGCATCGCTTTGTACGATTCG
CCCGAGCCTGGATCCCGCCTTCATTGACGCGCCCGCTGTCCGGGAACACCATGATGTCGA
GGTTTATGCAAATAGGGAAGAGCAGAAAACTAGTTCATGATGTATTGGTTAACTCGAAAC
CCAATAGTTTCACTGCACATAACATTGGATCCAACTTTGCGTTCGGTTTGGCACATACAG
GCAGGGCCTGTTTGCACGGGAAGGTTCCGCATGGACCGGGCACGTCATCCATGCTTGGAA
GAGCAAAGGAGAGTTTATACCGGAATCCAGCTGCAAGAAACTTTTCAGTTCTCTCAACAT
GTAGCCAGAATGCATTTCATGGTCAACTTGCTTGGAAGCAACTCATGACAATCGGTTCTC
ATGTACCAAAGGCATCTCCGATTTTAAGTAGGGTTGCTTGTGCCATTAGCTTGGCTGCCA
CTAGATCTAATTTAGTTCCTTACCTCTTTGCTTTCGTTGCTGGGGAGATAATGCTAGCTC
AGAAGACCAGTGCAGACGGAGAGTACTTACCAATTCGTGATAGTCTTTACACGCGTGCTC
AAGATGGTCGTATCTATGTCACCTCCTTGATATTTTCAGCAGTAGAGCTGGTCATCATAA
TCTTCAGATCAATATATTTGGCATTGTTGTTCACTCCAAGTATACTCATGGCCCCATTTG
CAGATACTCTTGGCAGTAAGTACAGGAAAACATGGCTCCGTCTTGTGCATCGTACCCTGG
AGAAAGCAGGTCCTGCATTTATTAAATGGGGCCAATGGGCTGCTACTCGCCCTGATTTAT
TTGAAAGTGACCTCTGTGCTGAATTGTCAAAACTACACACAAAAGCACCTGCTCACAGCT
TTGCTTATACCAAGAAGACTGTTGAGAAAGCTTTTGGTCGAAAGCTATCTGATCTTTTTG
AGAATTTTGAAGAAGAGCCTGTTGCTTCTGGAAGTGTTGCTCAAGTGCACCGAGCTGGTT
TGAGATTCCGGTATCCTGGCCAGCATATAAAGCGTGTAACAGTTGCTGTAAAAGTAAGAC
ATCCTGGCGTAGGAGAATCAATACGGAGGGATTTCACTATCATTAATGCAGTAGCTAAAA
TTTCTAGATATATTCCTACATTGAATTGGTTGCGGCTGGATGAGAGTGTGCAACAGTTTG
CTGTCTTTATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCTCATTTGAGCCGGTTTA
TCTACAACTTCCGAAGGTGGAAGGATGTGTCTTTTCCAAAACCTCTTTACCCACTTGTTC
ATCCTGCTGTATTGGTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATG
ACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCC
TGAAAATGCTTCTGGTTGATAACTTTGTTCATGCGGATATGCACCCTGGAAATATTTTGG
TCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTAGGCCACATGTAG
TATTCCTTGATGTAGGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGG
AATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGT
TATCAAAACAGCAAAACTGCCCAAATCCAAAAGCCTTCATTGAGGAAGTTGAACGGTCGT
TTTCCTTTTGGGGAACCTCTGAAGGTGATGCTGTCCACCCAGCTGAGTGTATGCACCAGT
TGCTTGAGCAAGTACGGCGCCATAAAGTAAACATTGATGGGAACGTTTGTACTGTTATGG
TCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACAATGTTATGA
AAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATCG
AAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAAAAAATTTTGACCCCTTTTT
TGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTT
CCTGTTTACTTTTAAATTCCACAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGC
CATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCC
ACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCAAAGGATGCGTTCTCCTCCA
TGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCTTTT
TGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGCTAA
CTGTTCCAAAAAAAACCTACGTCATGCCTGACAAAATTCATGGATTGCCCATATAACTGA
GTGCTTTCGCATTTGTTTGGAATGCAGAAGACTTAACTGTACAAATGTTTGCTGGTAAGC
AGGCATAGAGTTTATTTCCAGGTTGCTTCTGCGTTTCAAATTCCTGTCTTATGTTGATAC
AAAATACTAGCCAAATTCCTCCTTTTATACGTC

consensusID : consensus_11727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence

                              [TGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACACATGTTATGAAAACATTACAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACCATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAATAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCANCAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCCAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCCAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACCAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCCAAAAAAAACCTACGTCATGCCTGACAAATTCATGGATTGCCCCAAAAAAAAAA]

[+] EMBL BI805497             [TGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACACATGTTATGAAAACATTACAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACCATCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAATAAAATTTTGACCCCTTTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTTTTCCTGTTTACTTTTAAATTCCANCAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGACCCACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCCAAGGATGCGTTCTCCTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCCAAAGGCCTTCGCTGATGATCTTTTTGTAACTCGAGAGGTGTCAGTGAACCAGAGGTTTTTTATTGTATACACAGATACAGCTAACTGTTCCCAAAAAAAACCTACGTCATGCCTGACAAATTCATGGATTGCCCCAAAAAAAAAA]




>consensus_11727#1
TGGTCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACACATGTT
ATGAAAACATTACAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACCA
TCGAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAATAAAATTTTGACCCCT
TTTTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCT
TTTTCCTGTTTACTTTTAAATTCCANCAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAA
ACGGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTG
GACCCACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCCAAGGATGCGTTCTC
CTCCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCCAAAGGCCTTCGCTGATGAT
CTTTTTGTAACTCGAGAGGTGTCAGTGAACCAGAGGTTTTTTATTGTATACACAGATACA
GCTAACTGTTCCCAAAAAAAACCTACGTCATGCCTGACAAATTCATGGATTGCCCCAAAA
AAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11727#0      GCCCGTCCGTCCGCCCCCGCGCACCACGCGGCGTCTCGTCCTCCTCTCATCGGACCACCA 60
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AATTTGCAGCTCGCCTCCACCTCCACCTCCACCTCCACCTCCTCCGCCTCCGCCTCCGCC 120
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TCCAAACCCTAGCGCCTCGCCGCCCACCGACCCCCGCGCTTCTCCTCCATCCATGCGCCC 180
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CCGTCTCGTCGCCGCCGCCGCCGCCGCCGATCATGGCTGCCTCTAGGGTTTCCCGGGCCC 240
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AGCCATGGTGATCTCATCCCCGCCAACGAACCACTCTTCTGCATCGCTTTGTACGATTCG 300
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CCCGAGCCTGGATCCCGCCTTCATTGACGCGCCCGCTGTCCGGGAACACCATGATGTCGA 360
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      GGTTTATGCAAATAGGGAAGAGCAGAAAACTAGTTCATGATGTATTGGTTAACTCGAAAC 420
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CCAATAGTTTCACTGCACATAACATTGGATCCAACTTTGCGTTCGGTTTGGCACATACAG 480
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      GCAGGGCCTGTTTGCACGGGAAGGTTCCGCATGGACCGGGCACGTCATCCATGCTTGGAA 540
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      GAGCAAAGGAGAGTTTATACCGGAATCCAGCTGCAAGAAACTTTTCAGTTCTCTCAACAT 600
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      GTAGCCAGAATGCATTTCATGGTCAACTTGCTTGGAAGCAACTCATGACAATCGGTTCTC 660
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      ATGTACCAAAGGCATCTCCGATTTTAAGTAGGGTTGCTTGTGCCATTAGCTTGGCTGCCA 720
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CTAGATCTAATTTAGTTCCTTACCTCTTTGCTTTCGTTGCTGGGGAGATAATGCTAGCTC 780
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AGAAGACCAGTGCAGACGGAGAGTACTTACCAATTCGTGATAGTCTTTACACGCGTGCTC 840
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AAGATGGTCGTATCTATGTCACCTCCTTGATATTTTCAGCAGTAGAGCTGGTCATCATAA 900
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TCTTCAGATCAATATATTTGGCATTGTTGTTCACTCCAAGTATACTCATGGCCCCATTTG 960
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CAGATACTCTTGGCAGTAAGTACAGGAAAACATGGCTCCGTCTTGTGCATCGTACCCTGG 1020
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AGAAAGCAGGTCCTGCATTTATTAAATGGGGCCAATGGGCTGCTACTCGCCCTGATTTAT 1080
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TTGAAAGTGACCTCTGTGCTGAATTGTCAAAACTACACACAAAAGCACCTGCTCACAGCT 1140
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TTGCTTATACCAAGAAGACTGTTGAGAAAGCTTTTGGTCGAAAGCTATCTGATCTTTTTG 1200
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AGAATTTTGAAGAAGAGCCTGTTGCTTCTGGAAGTGTTGCTCAAGTGCACCGAGCTGGTT 1260
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TGAGATTCCGGTATCCTGGCCAGCATATAAAGCGTGTAACAGTTGCTGTAAAAGTAAGAC 1320
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      ATCCTGGCGTAGGAGAATCAATACGGAGGGATTTCACTATCATTAATGCAGTAGCTAAAA 1380
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TTTCTAGATATATTCCTACATTGAATTGGTTGCGGCTGGATGAGAGTGTGCAACAGTTTG 1440
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      CTGTCTTTATGATGTCTCAAGTTGACCTTGCAAGGGAAGCTGCTCATTTGAGCCGGTTTA 1500
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TCTACAACTTCCGAAGGTGGAAGGATGTGTCTTTTCCAAAACCTCTTTACCCACTTGTTC 1560
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      ATCCTGCTGTATTGGTTGAAACTTATGAGCAAGGTGAGAGTGTTGCACACTATGTCGATG 1620
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      ACCTCGATGGACATGATCGAATTAAAAGCGCCCTTGCACATATTGGCACTCATGCTCTCC 1680
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TGAAAATGCTTCTGGTTGATAACTTTGTTCATGCGGATATGCACCCTGGAAATATTTTGG 1740
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TCCGTGTTATACAACCAAGGAATTCAAATAACACCCTTTTGAAGTCTAGGCCACATGTAG 1800
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TATTCCTTGATGTAGGAATGACTGCTGAACTTTCAAGTAATGATCGTGTGAATTTACTGG 1860
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      AATTTTTCAAGGCTGTTGCACGCCGAGATGGTCGTACAGCTGCAGAACGTACACTGAGGT 1920
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TATCAAAACAGCAAAACTGCCCAAATCCAAAAGCCTTCATTGAGGAAGTTGAACGGTCGT 1980
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TTTCCTTTTGGGGAACCTCTGAAGGTGATGCTGTCCACCCAGCTGAGTGTATGCACCAGT 2040
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      TGCTTGAGCAAGTACGGCGCCATAAAGTAAACATTGATGGGAACGTTTGTACTGTTATGG 2100
consensus_11727#1      ---------------------------------------------------------TGG 3
                                                                                ***

consensus_11727#0      TCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACA-ATGTTATG 2159
consensus_11727#1      TCACTACATTAGTTCTTGAGGGCTGGCAGCGCAAGTTGGATCCAGATTACACATGTTATG 63
                       *************************************************** ********

consensus_11727#0      AAAACATTACAAACTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACAATC 2219
consensus_11727#1      AAAACATTACAA-CTTTACTTTTTAAGGAAGACTGGGCCAAGTCTCTTCAGTACACCATC 122
                       ************ ******************************************* ***

consensus_11727#0      GAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAA-AAAATTTTGACCCCTTT 2278
consensus_11727#1      GAAGGGCTTATGGCACCTTAGGGATGCATTGGAATCCACTAATAAAATTTTGACCCCTTT 182
                       ****************************************** *****************

consensus_11727#0      TTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTT 2338
consensus_11727#1      TTTGCGCAGTTGATGAGATATTGGAGGATGCTCCTTCGCACCAGTACATCTAGTTTCTTT 242
                       ************************************************************

consensus_11727#0      TTCCTGTTTACTTTTAAATTCCAC-AGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAAC 2397
consensus_11727#1      TTCCTGTTTACTTTTAAATTCCANCAGTTTTGTACCCATCTTGGCCAGTGCTGCTTAAAC 302
                       ***********************  ***********************************

consensus_11727#0      GGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGA 2457
consensus_11727#1      GGCCATGTCTAATTAATAATTGCAGCATTTTTTCAAGCTACCAGAGAAGTGTGCTCTGGA 362
                       ************************************************************

consensus_11727#0      CCCACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCAAAGGATGCGTTCTCCT 2517
consensus_11727#1      CCCACAATACCCTGGGATTATCTGCTTATGCACTCTGCAGGCCCAAGGATGCGTTCTCCT 422
                       ******************************************* ****************

consensus_11727#0      CCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCAAAAGGCCTTCGCTGATGATCT 2577
consensus_11727#1      CCATGAAATTTCTGTTAATAGCTCTTAGAAGATGTAGCCAAAGGCCTTCGCTGATGATCT 482
                       ************************************** *********************

consensus_11727#0      TTTTGTAACTCGAGAGGTGTCAGTGAACAAGAGGTTTTTTATTGTATACACAGATACAGC 2637
consensus_11727#1      TTTTGTAACTCGAGAGGTGTCAGTGAACCAGAGGTTTTTTATTGTATACACAGATACAGC 542
                       **************************** *******************************

consensus_11727#0      TAACTGTTCC-AAAAAAAACCTACGTCATGCCTGACAAAATTCATGGATTGCCCATATAA 2696
consensus_11727#1      TAACTGTTCCCAAAAAAAACCTACGTCATGCCTGACAAA-TTCATGGATTGCCCCAAAAA 601
                       ********** **************************** **************  * **

consensus_11727#0      CTGAGTGCTTTCGCATTTGTTTGGAATGCAGAAGACTTAACTGTACAAATGTTTGCTGGT 2756
consensus_11727#1      AAAAA------------------------------------------------------- 606
                          *                                                        

consensus_11727#0      AAGCAGGCATAGAGTTTATTTCCAGGTTGCTTCTGCGTTTCAAATTCCTGTCTTATGTTG 2816
consensus_11727#1      ------------------------------------------------------------
                                                                                   

consensus_11727#0      ATACAAAATACTAGCCAAATTCCTCCTTTTATACGTC 2853
consensus_11727#1      -------------------------------------