cluster # 1175

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1175 cluster # 1175 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1175#0 length = 830 sequences # 2

consensusID : consensus_1175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 830
fasta sequence

                              [TCCTTTTTTTTGCGAACAAAACTTTCGAACTCTTTTTTTTCCCCTTGTTTTCTATTTCATTTCATTCCGATAGATAGCAACAAGCAGTTCAAACACCATAACCAAAGCGAACTCCCTTCATGGTAACATCACGGACGAAGAACACCTAACACTGGATGGATGGATAGAGGGCTTCTCGACTCGAGAGAGCCACTGGACACGATAACGACTCGACTCGATGATAAGATGATTCTGACACGGATAGCTAAGGATAACTGGCCACGATGGGCCCCACCAATCAGTTCCTCCAGTTCCCGCCGGAGTCGCCGCCGTAGCCGCCGCCACGGCTGCCACCGTAGCCGCCGCCGCCGCCGCCACGGCCGCCGCCGTAGCCGCCGCCGCCACCGTAGCCGCCCTCACGGCGCCCGTAGCCGCCGCCGCCACCTCCTCCGTAGCCGCCGCCTCCACGACCGCCGCCGTAGCCGCCACCGCCGCCGCCGTAGCCCCCGCCTCCGCCGCCGGAGCGGCGGGACTGGGCCTCATTGACGGTGATGTTGCGGCCGTCGAGCTCCTTGCCGTTCATGCCCTCGATGGCGTCGCGCATCGACTGCTCGGAGGAGAAGGTGACGAAGCCAAACCCACGTGACCTCCCCGTCTCCCTGTCGTTGATGATCTTGGAGTCGAGGATCTCGCCGTAGGTGGAGAAGGCGGCCTCNAGGGAGCGGTTGTCGGTGGCCNCAGNGAGGCTGCNGANGAAGCAGCGGTACTCGANNNTCCNGCNGCTNTCTCAACCNACTAAACCCTAGACGAACNANGGAACCGAACCGAGGNGGAANAGGTAAAGAGGGGGN]

[+] EMBL CB660931             [TCCTTTTTTTTGCGAACAAAACTTTCGAACTCTTTTTTTTCCCCTTGTTTTCTATTTCATTTCATTCCGATAGATAGCAACAAGCAGTTCAAACACCATAACCAAAGCGAACTCCCTTCATGGTAACATCACGGACGAAGAACACCTAACACTGGATGGATGGATAGAGGGCTTCTCGACTCGAGAGAGCCACTGGACACGATAACGACTCGACTCGATGATAAGATGATTCTGACACGGATAGCTAAGGATAACTGGCCACGATGGGCCCCACCAATCAGTTCCTCCAGTTCCCGCCGGAGTCGCCGCCGTAGCCGCCGCCACGGCTGCCACCGTAGCCGCCGCCGCCGCCGCCACGGCCGCCGCCGTAGCCGCCGCCGCCACCGTAGCCGCCCTCACGGCGCCCGTAGCCGCCGCCGCCACCTCCTCCGTAGCCGCCGCCTCCACGACCGCCGCCGTAGCCGCCACCGCCGCCGCCGTAGCCCCCGCCTCCGCCGCCGGAGCGGCGGGACTGGGCCTCATTGACGGTGATGTTGCGGCCGTCGAGCTCCTTGCCGTTCATGCCCTCGATGGCGTCGCGCATCGACTGCTCGGAGGAGAAGGTGACGAAGCCAAACCCACGTGACCTCCCCGTCTCCCTGTCGTTGATGATCTTGGAGTCGAGGATCTCGCCGTAGGTGGAGAAGGCGGCCTCNAGGGAGCGGT                                                                                                                             ]
[-] EMBL AU069440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTNATTGACGGTGATGTTGCGGCCGTCGAGCTCCTTGCCGTTCATGCCCTCGATGGCGTCGCGCATCGACTGCTCGGAGGAGAAGGTGACGAAGCNAAACCCACGTGACCTCCCCGTCTCCCTGTCGTTGATGATCTTGGAGTNGAGGATCTCGCCGTAGGTGGAGAAGGNGGCNTCGAGGGAGNGNATGTCGGTGGCCNCAGNGAGGCTGCNGANGAAGCAGCGGTACTCGANNNTCCNGCNGCTNTCTCAACCNACTAAACCCTAGACGAACNANGGAACCGAACCGAGGNGGAANAGGTAAAGAGGGGGN]




>consensus_1175#0
TCCTTTTTTTTGCGAACAAAACTTTCGAACTCTTTTTTTTCCCCTTGTTTTCTATTTCAT
TTCATTCCGATAGATAGCAACAAGCAGTTCAAACACCATAACCAAAGCGAACTCCCTTCA
TGGTAACATCACGGACGAAGAACACCTAACACTGGATGGATGGATAGAGGGCTTCTCGAC
TCGAGAGAGCCACTGGACACGATAACGACTCGACTCGATGATAAGATGATTCTGACACGG
ATAGCTAAGGATAACTGGCCACGATGGGCCCCACCAATCAGTTCCTCCAGTTCCCGCCGG
AGTCGCCGCCGTAGCCGCCGCCACGGCTGCCACCGTAGCCGCCGCCGCCGCCGCCACGGC
CGCCGCCGTAGCCGCCGCCGCCACCGTAGCCGCCCTCACGGCGCCCGTAGCCGCCGCCGC
CACCTCCTCCGTAGCCGCCGCCTCCACGACCGCCGCCGTAGCCGCCACCGCCGCCGCCGT
AGCCCCCGCCTCCGCCGCCGGAGCGGCGGGACTGGGCCTCATTGACGGTGATGTTGCGGC
CGTCGAGCTCCTTGCCGTTCATGCCCTCGATGGCGTCGCGCATCGACTGCTCGGAGGAGA
AGGTGACGAAGCCAAACCCACGTGACCTCCCCGTCTCCCTGTCGTTGATGATCTTGGAGT
CGAGGATCTCGCCGTAGGTGGAGAAGGCGGCCTCNAGGGAGCGGTTGTCGGTGGCCNCAG
NGAGGCTGCNGANGAAGCAGCGGTACTCGANNNTCCNGCNGCTNTCTCAACCNACTAAAC
CCTAGACGAACNANGGAACCGAACCGAGGNGGAANAGGTAAAGAGGGGGN

clustalw multiple alignements is not computed in this case