cluster # 11754

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Oryza sativa
cluster # 11754 cluster # 11754 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11754#0 length = 1803 sequences # 3

consensus_11754#1 length = 602 sequences # 5
consensus_11754#2 length = 373 sequences # 1

consensusID : consensus_11754#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1803
fasta sequence

                              [CGCCGTCCGTCTCCGCCTACCTCCCGCTCCCTCCTTCCTCCCGTCGCCTCATGCCCCCGCATCCGCACGGCTGAAGTCGCCTACGCAGGGGAGGAGCGAAACCCTAGCTCCGGATTCTTCTCCTCTCCTCCTTTCTTCTCTCCGATGCACCCGAGTGACCGAGTGTGCGGCGGCGATGGTGACGACGACGGTCCGGCGGAGTGGTGCGCACGAGCTGTCGGCTGGGGGCGCAGCGAGGTGTGAACGGCGCGCGTGCGGTGGCACCGGCGCACCCAAGAGGGGGCTTGGAGTGCAAGCCAGAGCACGCAAGGACGGAGCGTGTGCCGGCGCGCGAGGACGGTGTTGCATGCTTCCTGGCGGTGGCTGCACAGCGAGCTTATGCCTTGATGTTCTTCGGTGGTTTAGGGCTCCAATTCGGGTTATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACTTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCGACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTCCAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTAAGCAACCCTGTAGGTATTGATACTTTGGTAGAATTGTCATAAGGTAAAAGTGCTCTGTTGTGATAAATTGAGATTGTAACAATGCGATTGGGATGAAGTATGTAGATTTCAATAATAGCTGGATTCATGATTAATAGCTGGATCGAATCATTAATTGATCCCAGCGTCCACCTTTTGTTGTGCGAGTTAACACATACTCGTAGGGAGGGCTTATCAGTTTTAGTAAGCAATTTTTTCAACTACTACCGGCAATTGTTAGAAACTACTGGCAGGCACTGCTCAAATGGACATCATACGATTCATAACTTACATGTCCTCACCAAAAGAATTTTATATGACAAAAATAACATTAGTTAAGGGTAGGATCACTTGTTTAGATACATAGGTTTGGCCAGTTCAACCTGCTCCATTGTTTCAGCCTGAAAAGCATTTTGCTATTTTTTGACCTTTGATGGCCTTTAGGGGTTGATCTAGTTGATTTGGCCAAATAATAAGGACTTTAAAATGTTGTAGCATGGCATATAGTGGTGCTGAATATTTAAAATTCATGTGGCCGAAGTAGTTTGTTGGTAGGTTTGAAATTTTTGATAATTTTGTTTGTAGGTTTGAAAATCCAGATACTAATGATGTTAGTGATTTGTTATAGATGGCTGTGGCCTGTGAAAGTATGAAAACTTTCAGAAAATAGTAGATAGCTGTTTAATTTGCTTTATTATTTAATTTATTTTTGTGCTCGGTTTTTGTACTTGCATAGCAGATCCTTGATATTTTTGAAATTGTAATGATTTCCTTACATGCCACTATGAGTTAATTGTTGCTAGCTGTTCAGGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071142             [CGCCGTCCGTCTCCGCCTACCTCCCGCTCCCTCCTTCCTCCCGTCGCCTCATGCCCCCGCATCCGCACGGCTGAAGTCGCCTACGCAGGGGAGGAGCGAAACCCTAGCTCCGGATTCTTCTCCTCTCCTCCTTTCTTCTCTCCGATGCACCCGAGTGACCGAGTGTGCGGCGGCGATGGTGACGACGACGGTCCGGCGGAGTGGTGCGCACGAGCTGTCGGCTGGGGGCGCAGCGAGGTGTGAACGGCGCGCGTGCGGTGGCACCGGCGCACCCAAGAGGGGGCTTGGAGTGCAAGCCAGAGCACGCAAGGACGGAGCGTGTGCCGGCGCGCGAGGACGGTGTTGCATGCTTCCTGGCGGTGGCTGCACAGCGAGCTTATGCCTTGATGTTCTTCGGTGGTTTAGGGCTCCAATTCGGGTTATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACTTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCGACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTCCAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTAAGCAACCCTGTAGGTATTGATACTTTGGTAGAATTGTCATAAGGTAAAAGTGCTCTGTTGTGATAAATTGAGATTGTAACAATGCGATTGGGATGAAGTATGTAGATTTCAATAATAGCTGGATTCATGATTAATAGCTGGATCGAATCATTAATTGATCCCAGCGTCCACCTTTTGTTGTGCGAGTTAACACATACTCGTAGGGAGGGCTTATCAGTTTTAGTAAGCAATTTTTTCAACTACTACCGGCAATTGTTAGAAACTACTGGCAGGCACTGCTCAAATGGACATCATACGATTCATAACTTACATGTCCTCACCAAAAGAATTTTATATGACAAAAATAACATTAGTTAAGGGTAGGATCACTTGTTTAGATACATAGGTTTGGCCAGTTCAACCTGCTCCATTGTTTCAGCCTGAAAAGCATTTTGCTATTTTTTGACCTTTGATGGCCTTTAGGGGTTGATCTAGTTGATTTGGCCAAATAATAAGGACTTTAAAATGTTGTAGCATGGCATATAGTGGTGCTGAATATTTAAAATTCATGTGGCCGAAGTAGTTTGTTGGTAGGTTTGAAATTTTTGATAATTTTGTTTGTAGGTTTGAAAATCCAGATACTAATGATGTTAGTGATTTGTTATAGATGGCTGTGGCCTGTGAAAGTATGAAAACTTTCAGAAAATAGTAGATAGCTGTTTAATTTGCTTTATTATTTAATTTATTTTTGTGCTCGGTTTTTGTACTTGCATAGCAGATCCTTGATATTTTTGAAATTGTAATGATTTCCTTACATGCCACTATGAGTTAATTGTTGCTAGCTGTTCAGGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATG                                               ]
[+] EMBL AU058407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTGATTTGGCCAAATAATAAGGACTTTAAAATGTTGTAGCATGGCATATAGTGGTGCTGAATATTTAAAATTCATGTGGCCGAAGTAGTTTGTTGGTAGGTTTGAAATTTTTGATAATTTTGTTTGTAGGTTTGAAAATCCAGATACTAATGATGTTAGTGATTTGTTATAGATGGCTGTGGCCTGTGAAAGTATGAAAACTTTCAGAAAATAGTAGATAGCTGTTTAATTTGCTTTATTATTTAATTTATTTTTGTGCNCGGTTTTTGTACNTGCATAGCAGATCCTTGAAATTTTTGAAATTGTAATGATTTCCNTACATGCCACTATGAG TNATTG TGCCACCTG TCAGG TA TTNTCC AGATGAAGTGACTGCNACGCCA TTGACTGAATTGG AGG NA TGCAGCTAG TGC TNCCTA TGCA CTGT                                                                                                                                                                                                                                                                               ]
[-] EMBL CF325826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTAGATAGCTGTTTAATTTGCTTTATTATTTAATTTATTTTTGTGCTCGGTTTTTGTACTTGCATAGCAGATCCTTGATATTTTTGAAATTGTAATGATTTCCTTACATGCCACTATGAGTTAATTGTTGCTAGCTGTTCAGGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11754#0
CGCCGTCCGTCTCCGCCTACCTCCCGCTCCCTCCTTCCTCCCGTCGCCTCATGCCCCCGC
ATCCGCACGGCTGAAGTCGCCTACGCAGGGGAGGAGCGAAACCCTAGCTCCGGATTCTTC
TCCTCTCCTCCTTTCTTCTCTCCGATGCACCCGAGTGACCGAGTGTGCGGCGGCGATGGT
GACGACGACGGTCCGGCGGAGTGGTGCGCACGAGCTGTCGGCTGGGGGCGCAGCGAGGTG
TGAACGGCGCGCGTGCGGTGGCACCGGCGCACCCAAGAGGGGGCTTGGAGTGCAAGCCAG
AGCACGCAAGGACGGAGCGTGTGCCGGCGCGCGAGGACGGTGTTGCATGCTTCCTGGCGG
TGGCTGCACAGCGAGCTTATGCCTTGATGTTCTTCGGTGGTTTAGGGCTCCAATTCGGGT
TATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACTTCCGCC
GCTGACGACAGGGGAGGTTGCATGCCATCGACATTGTGCCCCCGTAGTGTCGACTTGAAC
CGGCTTGGACACAACTCCAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCT
TCGTGGGAAAAAAAGTAAGCAACCCTGTAGGTATTGATACTTTGGTAGAATTGTCATAAG
GTAAAAGTGCTCTGTTGTGATAAATTGAGATTGTAACAATGCGATTGGGATGAAGTATGT
AGATTTCAATAATAGCTGGATTCATGATTAATAGCTGGATCGAATCATTAATTGATCCCA
GCGTCCACCTTTTGTTGTGCGAGTTAACACATACTCGTAGGGAGGGCTTATCAGTTTTAG
TAAGCAATTTTTTCAACTACTACCGGCAATTGTTAGAAACTACTGGCAGGCACTGCTCAA
ATGGACATCATACGATTCATAACTTACATGTCCTCACCAAAAGAATTTTATATGACAAAA
ATAACATTAGTTAAGGGTAGGATCACTTGTTTAGATACATAGGTTTGGCCAGTTCAACCT
GCTCCATTGTTTCAGCCTGAAAAGCATTTTGCTATTTTTTGACCTTTGATGGCCTTTAGG
GGTTGATCTAGTTGATTTGGCCAAATAATAAGGACTTTAAAATGTTGTAGCATGGCATAT
AGTGGTGCTGAATATTTAAAATTCATGTGGCCGAAGTAGTTTGTTGGTAGGTTTGAAATT
TTTGATAATTTTGTTTGTAGGTTTGAAAATCCAGATACTAATGATGTTAGTGATTTGTTA
TAGATGGCTGTGGCCTGTGAAAGTATGAAAACTTTCAGAAAATAGTAGATAGCTGTTTAA
TTTGCTTTATTATTTAATTTATTTTTGTGCTCGGTTTTTGTACTTGCATAGCAGATCCTT
GATATTTTTGAAATTGTAATGATTTCCTTACATGCCACTATGAGTTAATTGTTGCTAGCT
GTTCAGGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGAT
ATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGG
ATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAA
AGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAG
AAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGA
ATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAAAAAAAAAAAAAAAAAAAA
AAA

consensusID : consensus_11754#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 602
fasta sequence

                              [CCAATTCGGGGTTATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACCTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCG-ACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTC-CAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]

[-] EMBL CF303919             [CCAATTCGGGGTTATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACCTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCG ACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTC CAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[-] EMBL CF303819             [               TGGGCTTGACGAATTTTGT ATTTTGGGACTGTGCGTGATCTGCCGGCACCTCCGCCG TGACGACAGGGGAGGTTGCATGCCATCGAACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTCNCAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAAAAGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAA                    ]
[-] EMBL CF303575             [                    TTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACCTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCG ACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTC CAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCAAACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[-] EMBL CF304670             [                                                                                 AGGGGAGGTTGCATGCCATCG ACATTGTGCCCCCGTAGTGTCGACTTGAACCGGCTTGGACACAACTC CAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[-] EMBL CF304897             [                                                                                                                                                                             TGTGATTTCCTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]




>consensus_11754#1
CCAATTCGGGGTTATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCC
GGCACCTCCGCCGCTGACGACAGGGGAGGTTGCATGCCATCGACATTGTGCCCCCGTAGT
GTCGACTTGAACCGGCTTGGACACAACTCCAGGCTTCGTCTCAAACAGGCATGTGATTTC
CTGATGCGTTCTTCGTGGGAAAAAAAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCA
TTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAA
TATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCA
ATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATG
CATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTT
TCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGT
AATTGATTTCAGACATGATGAGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAG
TT

consensusID : consensus_11754#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence

                              [AAGTGACTNCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGNTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTCTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAGATATTTTTGGTTGGATTGAAAAA]

[+] EMBL AU095052             [AAGTGACTNCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGNTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTCTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAGATATTTTTGGTTGGATTGAAAAA]




>consensus_11754#2
AAGTGACTNCAACGTCATTTGACTGAATTGGAAGGATATTGCAGCTAGTTGCTTGCCTAT
TGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGGATGTTTTTGGCAGAAGNTGCATA
TTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAAAGCTTCATATTTTGCTGAAGATA
GACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAGAAATTGTGTTTGTGTAGCCTACT
TTTGATGATTTTCGTTCTCTGCTGGTTACTTGTATGAATACATTATATAGATGACTTTGT
ATGAATGCATGTTCTGTAATTGATTTCAGACATGATGAGGATCTTGTAAGATATTTTTGG
TTGGATTGAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      CGCCGTCCGTCTCCGCCTACCTCCCGCTCCCTCCTTCCTCCCGTCGCCTCATGCCCCCGC 60
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      ATCCGCACGGCTGAAGTCGCCTACGCAGGGGAGGAGCGAAACCCTAGCTCCGGATTCTTC 120
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TCCTCTCCTCCTTTCTTCTCTCCGATGCACCCGAGTGACCGAGTGTGCGGCGGCGATGGT 180
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GACGACGACGGTCCGGCGGAGTGGTGCGCACGAGCTGTCGGCTGGGGGCGCAGCGAGGTG 240
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TGAACGGCGCGCGTGCGGTGGCACCGGCGCACCCAAGAGGGGGCTTGGAGTGCAAGCCAG 300
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      AGCACGCAAGGACGGAGCGTGTGCCGGCGCGCGAGGACGGTGTTGCATGCTTCCTGGCGG 360
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TGGCTGCACAGCGAGCTTATGCCTTGATGTTCTTCGGTGGTTTAGGGCTCCAATTCGGGT 420
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TATTGGGCTTGACGAATTTTGTGATTTTGGGACTGTGCGTGATCTGCCGGCACTTCCGCC 480
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GCTGACGACAGGGGAGGTTGCATGCCATCGACATTGTGCCCCCGTAGTGTCGACTTGAAC 540
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      CGGCTTGGACACAACTCCAGGCTTCGTCTCAAACAGGCATGTGATTTCCTGATGCGTTCT 600
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TCGTGGGAAAAAAAGTAAGCAACCCTGTAGGTATTGATACTTTGGTAGAATTGTCATAAG 660
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GTAAAAGTGCTCTGTTGTGATAAATTGAGATTGTAACAATGCGATTGGGATGAAGTATGT 720
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      AGATTTCAATAATAGCTGGATTCATGATTAATAGCTGGATCGAATCATTAATTGATCCCA 780
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GCGTCCACCTTTTGTTGTGCGAGTTAACACATACTCGTAGGGAGGGCTTATCAGTTTTAG 840
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TAAGCAATTTTTTCAACTACTACCGGCAATTGTTAGAAACTACTGGCAGGCACTGCTCAA 900
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      ATGGACATCATACGATTCATAACTTACATGTCCTCACCAAAAGAATTTTATATGACAAAA 960
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      ATAACATTAGTTAAGGGTAGGATCACTTGTTTAGATACATAGGTTTGGCCAGTTCAACCT 1020
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GCTCCATTGTTTCAGCCTGAAAAGCATTTTGCTATTTTTTGACCTTTGATGGCCTTTAGG 1080
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GGTTGATCTAGTTGATTTGGCCAAATAATAAGGACTTTAAAATGTTGTAGCATGGCATAT 1140
                                                                                   

consensus_11754#1      ------------------------------------------------------------
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      AGTGGTGCTGAATATTTAAAATTCATGTGGCCGAAGTAGTTTGTTGGTAGGTTTGAAATT 1200
                                                                                   

consensus_11754#1      -----------------CCAATTCGGGGTTATTGGGCTTGACGAATTTTGTGATTT--TG 41
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TTTGATAATTTTGTTTGTAGGTTTGAAAATCCAGATACTAATGATGTTAGTGATTTGTTA 1260
                                                                                   

consensus_11754#1      GGACTGTGCGTGATCTGCCGGCACCTCCGC-CGCTGACGACAGGGGAGGTTGC-ATGCCA 99
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TAGATGGCTGTGGCCTGTGAAAGTATGAAAACTTTCAGAAAATAGTAGATAGCTGTTTAA 1320
                                                                                   

consensus_11754#1      TCGACATTGTGCCCCCGT--AGTGTCG-ACTTGAACCG---GCTTGGACA-CAACTCCAG 152
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      TTTGCTTTATTATTTAATTTATTTTTGTGCTCGGTTTTTGTACTTGCATAGCAGATCCTT 1380
                                                                                   

consensus_11754#1      GCTTCGTCTCAAACAGGCATG---TGATTTCCTG-----ATGCGTTCTTCGTGGGAAAAA 204
consensus_11754#2      ------------------------------------------------------------
consensus_11754#0      GATATTTTTGAAATTGTAATGATTTCCTTACATGCCACTATGAGTTAATTGTTGCTAGCT 1440
                                                                                   

consensus_11754#1      ----AAGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGAT 260
consensus_11754#2      -----------------------AAGTGACTNCAACGTCATTTGACTGAATTGGAAGGAT 37
consensus_11754#0      GTTCAGGTTATTTTTCCAAGATGAAGTGACTGCAACGTCATTTGACTGAATTGGAAGGAT 1500
                                              ******** ****************************

consensus_11754#1      ATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGG 320
consensus_11754#2      ATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGG 97
consensus_11754#0      ATTGCAGCTAGTTGCTTGCCTATTGCAGCTGTTCTGGCAATATAGAGTGCAATTACCAGG 1560
                       ************************************************************

consensus_11754#1      ATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAA 380
consensus_11754#2      ATGTTTTTGGCAGAAGNTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAA 157
consensus_11754#0      ATGTTTTTGGCAGAAGCTGCATATTTTTGTTGTAGGTGCAATATTCTTCTGAAGATACAA 1620
                       **************** *******************************************

consensus_11754#1      AGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAG 440
consensus_11754#2      AGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAG 217
consensus_11754#0      AGCTTCATATTTTGCTGAAGATAGACAAGTTGTACAGATGCATGTGCTGATCCTAGAGAG 1680
                       ************************************************************

consensus_11754#1      AAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGA 500
consensus_11754#2      AAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTCTCTGCTGGTTACTTGTATGA 277
consensus_11754#0      AAATTGTGTTTGTGTAGCCTACTTTTGATGATTTTCGTTTTCTGCTGGTTACTTGTATGA 1740
                       *************************************** ********************

consensus_11754#1      ATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATG 560
consensus_11754#2      ATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAATTGATTTCAGACATGATG 337
consensus_11754#0      ATACATTATATAGATGACTTTGTATGAATGCATGTTCTGTAAAAAAAAAAAAAAAAAAAA 1800
                       ******************************************   *    * * *  *  

consensus_11754#1      AGGATCTTGTAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT 602
consensus_11754#2      AGGATCTTGTAAGATATTTTTGGTTGGATTGAAAAA------ 373
consensus_11754#0      AAA--------------------------------------- 1803
                       *