cluster # 11762

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Oryza sativa
cluster # 11762 cluster # 11762 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11762#0 length = 2439 sequences # 8

consensus_11762#1 length = 172 sequences # 1

consensusID : consensus_11762#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2439
fasta sequence

                              [CCAGATCTCACATTTTTTGTTCAGTTTCTCTCCACGCCACCACTCCCTCCTCCCTCTTCCTCTTCCCCTTCCTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCGCCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGCTCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAGAAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGGAAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTCCGTCTCGCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTCCGTCCGGCCGGCCGTGCGGCGCGCGTGGAGGAGGTGG--TGGTGGGTGCGGAGGTGCGTGCGTGAGAGGGGCGTCTTGCCACAATGCCGCAGTACCAGGAGCTTCCCTGCGGCGGGCAGGTGCTCGACATCGACACCGCGCTCAAGGACGGCATCCTTGGGGGTGGCCCGGAGCTCGGGGACGCGGCGGCCGGGGACGGAGGGAAGCAGCCGGTGGAGCTGAGGAAGATGATGGACGAGCTGGACGCGGCGGGGGACGGCGGCGGGGACGAGGCGGTGCCGGCGGTGTTCATCTGCCCGATCTCGCTCGAGCCCATGGTGGATCCGGTGACGCTGTGCACCGGGCAGACGTACGAGAGCGCCAACATCTCGCGGTGGCTCGCCCTCGGCCACCGGACGTGCCCCACCACGATGCAGGAGCTCTGGGACGTCACGCCCATCCCCAACACCACGCTCCGGCAGCTCATCGCCGCCTGGTTCTCCCGCCGCTACACCCGCTTCAAGAAGCGCTCCGCCGACTTCCACGGCCGGGCCGCCGAGCTCGTCCACGCGCTCCGCGGCACGGCCGTCCCGAAGAGGCAGCCCCTCAAGGGTCAGGCCAGGGTAGCCGCGCTCCGGGAGCTGCGGTCCCTCGCCGCCGCCCACCAGTCCGTGACCAAGGCCATCGCCGAGGCCGGCGGCGTCGGGCTGTTGACCTCCCTCCTCGGCCCCTTCACGTCACACGCCGTGGGGTCCGAGGCGGTCGCCATTCTTGTGAGCGGCGTGCCGCTCGACGCCGACGCCAAGGCCGCATTGATGCAGCCGGCGAAGGTGTCGCTCTTGGTGGACATGCTCAATGAGGGTGCGGTGGACACCAAGATCAACTGCGTCCGCCTCATCCGCATACTCATGGAGGAGAAAGGCTTCCGGCCGGACACAGTAGCCAGCCTGAGCCTGCTAGTTGGAGTCATGCGCCTCGTTCGAGACAAGCGGCATCCGGACGGCGTCGCTGCGGGGCTTGAGCTGCTCAATTCGATATGCGCAGTGCACAAGCCTGCAAGAAGTTTGATTGTTAGCATCGGTGCGGTTCCGCAACTAGTAGAATTGCTGCCAGAGCTGCCAACGGAGTGTGTAGAGCCAGCCTTGGATATCTTGGATGCGCTTGCCGCAGTCCCGGAGGGTCGGATAGCGCTGAAGGATTGCCCCAGGACGATAACCAATGCTGTGAGATTGTTGATGAGGGTTTCAGAAGCATGCACACGGCGAGCTTTGTCAATGCTGTGG-GTGG-TGTGTAG-GATGGCGC-CTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTCATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTG-CTCAAGCTGTG-CACCATGAA-TTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAGTGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAGGTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCA-AGAAACCTGCT-GT-TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGAAATACACATTGCCATAGGCCATAT--CTGGGAAAAAAAA]

[+] EMBL AK068218             [CCAGATCTCACATTTTTTGTTCAGTTTCTCTCCACGCCACCACTCCCTCCTCCCTCTTCCTCTTCCCCTTCCTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCGCCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGCTCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAGAAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGGAAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTCCGTCTCGCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTCCGTCCGGCCGGCCGTGCGGCGCGCGTGGAGGAGGTGG  TGGTGGGTGCGGAGGTGCGTGCGTGAGAGGGGCGTCTTGCCACAATGCCGCAGTACCAGGAGCTTCCCTGCGGCGGGCAGGTGCTCGACATCGACACCGCGCTCAAGGACGGCATCCTTGGGGGTGGCCCGGAGCTCGGGGACGCGGCGGCCGGGGACGGAGGGAAGCAGCCGGTGGAGCTGAGGAAGATGATGGACGAGCTGGACGCGGCGGGGGACGGCGGCGGGGACGAGGCGGTGCCGGCGGTGTTCATCTGCCCGATCTCGCTCGAGCCCATGGTGGATCCGGTGACGCTGTGCACCGGGCAGACGTACGAGAGCGCCAACATCTCGCGGTGGCTCGCCCTCGGCCACCGGACGTGCCCCACCACGATGCAGGAGCTCTGGGACGTCACGCCCATCCCCAACACCACGCTCCGGCAGCTCATCGCCGCCTGGTTCTCCCGCCGCTACACCCGCTTCAAGAAGCGCTCCGCCGACTTCCACGGCCGGGCCGCCGAGCTCGTCCACGCGCTCCGCGGCACGGCCGTCCCGAAGAGGCAGCCCCTCAAGGGTCAGGCCAGGGTAGCCGCGCTCCGGGAGCTGCGGTCCCTCGCCGCCGCCCACCAGTCCGTGACCAAGGCCATCGCCGAGGCCGGCGGCGTCGGGCTGTTGACCTCCCTCCTCGGCCCCTTCACGTCACACGCCGTGGGGTCCGAGGCGGTCGCCATTCTTGTGAGCGGCGTGCCGCTCGACGCCGACGCCAAGGCCGCATTGATGCAGCCGGCGAAGGTGTCGCTCTTGGTGGACATGCTCAATGAGGGTGCGGTGGACACCAAGATCAACTGCGTCCGCCTCATCCGCATACTCATGGAGGAGAAAGGCTTCCGGCCGGACACAGTAGCCAGCCTGAGCCTGCTAGTTGGAGTCATGCGCCTCGTTCGAGACAAGCGGCATCCGGACGGCGTCGCTGCGGGGCTTGAGCTGCTCAATTCGATATGCGCAGTGCACAAGCCTGCAAGAAGTTTGATTGTTAGCATCGGTGCGGTTCCGCAACTAGTAGAATTGCTGCCAGAGCTGCCAACGGAGTGTGTAGAGCCAGCCTTGGATATCTTGGATGCGCTTGCCGCAGTCCCGGAGGGTCGGATAGCGCTGAAGGATTGCCCCAGGACGATAACCAATGCTGTGAGATTGTTGATGAGGGTTTCAGAAGCATGCACACGGCGAGCTTTGTCAATGCTGTGG GTGG TGTGTAG GATGGCGC CTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTCATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTG CTCAAGCTGTG CACCATGAA TTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAGTGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAGGTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCA AGAAACCTGCT GT TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGAAATACACATTGCCATAGG                     ]
[+] EMBL CB636145             [         ACATTTTTTGTTCAGTTTCTCTCCACGCCACCACTCCCTCCTCCCTCTTCCTCTTCCCCTTCCTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCGCCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGCTCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAGAAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGGAAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTCCGTCTCGCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTCCGTCCGGCCGGCCGTGCGGCGCGCGTGGAGGAGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C91823               [                                                                       CTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCGCCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGCTCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAGAAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGGAAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTNCGTCTCGCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTNCGTCCGGCCGGCCGTNCGGCGCGCGTGGAGGAGGTTGNTTGGTGGGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB684587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tgtCTGTGGAGTGGCTGTGTAGCGATGGCGCATTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTCATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTG CTCAAGCTGTG CACCATGAA TTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAGTGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGATCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAACATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGACGTGGTAAGTACAGCCAGATT                                                                                                                                                                                                            ]
[-] EMBL CB684588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGG TGTGTAG GATGGCGC CTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTCATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTG CTCAAGCTGTG CACCATGAA TTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAGTGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAGGTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCA AGAAACCTGCT GT TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAAGTGAAATACACATTGCCATAGGCCATAT  CTG          ]
[+] EMBL AU094784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAAGCGNCCGAACTGCCTCAAGCTGTGCCCCCATGAATTTNCACATCGNCGGTATTCATCCCCAAGTGCAAGCTTCCGAAGACAATCCAGTGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGTAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAGGTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCA AGAAACCTGCT GT TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGAAATACACATTGCCATAGGCCATAT  CTTGGAAAAAAAA]
[-] EMBL CB636146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCACCTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCGTTTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAGGGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATGATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTGGGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAGGTGGTAAGAACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCA AGAAACCTGCT GT TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTTTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGAAATACACATTGCCATAGGC                    ]
[+] EMBL BI807109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGGTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCACAGAAACCTGCTNNTCTTTAGATTTTC GC ATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCTTCGGTGTAATTGATGGTATAAACTGGTTAGAATTGTATACAGTACTGTTGCTTCATAATTGAAATACACATTGCCATAGCCCATATCCCTGGAAAAAAA  ]




>consensus_11762#0
CCAGATCTCACATTTTTTGTTCAGTTTCTCTCCACGCCACCACTCCCTCCTCCCTCTTCC
TCTTCCCCTTCCTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCG
CCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGC
TCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAG
AAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGG
AAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTCCGTCTC
GCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTCCGTCCGGCCGGCCGTGCG
GCGCGCGTGGAGGAGGTGGTGGTGGGTGCGGAGGTGCGTGCGTGAGAGGGGCGTCTTGCC
ACAATGCCGCAGTACCAGGAGCTTCCCTGCGGCGGGCAGGTGCTCGACATCGACACCGCG
CTCAAGGACGGCATCCTTGGGGGTGGCCCGGAGCTCGGGGACGCGGCGGCCGGGGACGGA
GGGAAGCAGCCGGTGGAGCTGAGGAAGATGATGGACGAGCTGGACGCGGCGGGGGACGGC
GGCGGGGACGAGGCGGTGCCGGCGGTGTTCATCTGCCCGATCTCGCTCGAGCCCATGGTG
GATCCGGTGACGCTGTGCACCGGGCAGACGTACGAGAGCGCCAACATCTCGCGGTGGCTC
GCCCTCGGCCACCGGACGTGCCCCACCACGATGCAGGAGCTCTGGGACGTCACGCCCATC
CCCAACACCACGCTCCGGCAGCTCATCGCCGCCTGGTTCTCCCGCCGCTACACCCGCTTC
AAGAAGCGCTCCGCCGACTTCCACGGCCGGGCCGCCGAGCTCGTCCACGCGCTCCGCGGC
ACGGCCGTCCCGAAGAGGCAGCCCCTCAAGGGTCAGGCCAGGGTAGCCGCGCTCCGGGAG
CTGCGGTCCCTCGCCGCCGCCCACCAGTCCGTGACCAAGGCCATCGCCGAGGCCGGCGGC
GTCGGGCTGTTGACCTCCCTCCTCGGCCCCTTCACGTCACACGCCGTGGGGTCCGAGGCG
GTCGCCATTCTTGTGAGCGGCGTGCCGCTCGACGCCGACGCCAAGGCCGCATTGATGCAG
CCGGCGAAGGTGTCGCTCTTGGTGGACATGCTCAATGAGGGTGCGGTGGACACCAAGATC
AACTGCGTCCGCCTCATCCGCATACTCATGGAGGAGAAAGGCTTCCGGCCGGACACAGTA
GCCAGCCTGAGCCTGCTAGTTGGAGTCATGCGCCTCGTTCGAGACAAGCGGCATCCGGAC
GGCGTCGCTGCGGGGCTTGAGCTGCTCAATTCGATATGCGCAGTGCACAAGCCTGCAAGA
AGTTTGATTGTTAGCATCGGTGCGGTTCCGCAACTAGTAGAATTGCTGCCAGAGCTGCCA
ACGGAGTGTGTAGAGCCAGCCTTGGATATCTTGGATGCGCTTGCCGCAGTCCCGGAGGGT
CGGATAGCGCTGAAGGATTGCCCCAGGACGATAACCAATGCTGTGAGATTGTTGATGAGG
GTTTCAGAAGCATGCACACGGCGAGCTTTGTCAATGCTGTGGGTGGTGTGTAGGATGGCG
CCTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTC
ATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTGCTCAAGCTGTGC
ACCATGAATTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAG
TGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCAC
CTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCG
TCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAG
GGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATG
ATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTG
GGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAG
GTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCAAGAAACCTGCTGT
TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCT
TCGGTGTAATTGATGGTATAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATT
GAAATACACATTGCCATAGGCCATATCTGGGAAAAAAAA

consensusID : consensus_11762#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 172
fasta sequence

                              [GTGAGCCATCGTGATGGATTTGNGTGTCCTTCCCTGTGTATGTGCCTTGCACTGCCTTTGTCGGGGTTGTGAAAATTGTGACTTNTGGTAACTAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGCAAATACACCTTGCCATAGGCCATATCTTGGAAAAAA]

[+] EMBL BQ907973             [GTGAGCCATCGTGATGGATTTGNGTGTCCTTCCCTGTGTATGTGCCTTGCACTGCCTTTGTCGGGGTTGTGAAAATTGTGACTTNTGGTAACTAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAATTGCAAATACACCTTGCCATAGGCCATATCTTGGAAAAAA]




>consensus_11762#1
GTGAGCCATCGTGATGGATTTGNGTGTCCTTCCCTGTGTATGTGCCTTGCACTGCCTTTG
TCGGGGTTGTGAAAATTGTGACTTNTGGTAACTAAACTGGGTAGAATTGTATACAGTACT
GTTGCTTCATAATTGCAAATACACCTTGCCATAGGCCATATCTTGGAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11762#0      CCAGATCTCACATTTTTTGTTCAGTTTCTCTCCACGCCACCACTCCCTCCTCCCTCTTCC 60
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      TCTTCCCCTTCCTCCTCACCTCCCATTCCCTCAGATCTTCCCCCATATCTCTCTGTCTCG 120
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CCGCAGTCCGCCTCCCAATCTGAGGAGCTTTTCTTCAGCTCAAGCTTCTTGCTCGCTTGC 180
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      TCTCTACTATCTCTCCTTTTGACTCGTGGCCAAGCTGCAGAGGAAACCCAAAATTCCAAG 240
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      AAAAGCAACAGGTCAAGAAAGAGGGAAAGCTAAGGTGAGAGGAGATGGGAGGAAGGAAGG 300
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      AAAGAAAGATGGTGATGATGGCGATAAGTCGCCCCATGATTCGCGCCATCATTCCGTCTC 360
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GCCCGAGGCCAGTGCGCTGGTAAAAGGGCCTCGCCGTCCGTCCGTCCGGCCGGCCGTGCG 420
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GCGCGCGTGGAGGAGGTGGTGGTGGGTGCGGAGGTGCGTGCGTGAGAGGGGCGTCTTGCC 480
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ACAATGCCGCAGTACCAGGAGCTTCCCTGCGGCGGGCAGGTGCTCGACATCGACACCGCG 540
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CTCAAGGACGGCATCCTTGGGGGTGGCCCGGAGCTCGGGGACGCGGCGGCCGGGGACGGA 600
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GGGAAGCAGCCGGTGGAGCTGAGGAAGATGATGGACGAGCTGGACGCGGCGGGGGACGGC 660
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GGCGGGGACGAGGCGGTGCCGGCGGTGTTCATCTGCCCGATCTCGCTCGAGCCCATGGTG 720
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GATCCGGTGACGCTGTGCACCGGGCAGACGTACGAGAGCGCCAACATCTCGCGGTGGCTC 780
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GCCCTCGGCCACCGGACGTGCCCCACCACGATGCAGGAGCTCTGGGACGTCACGCCCATC 840
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CCCAACACCACGCTCCGGCAGCTCATCGCCGCCTGGTTCTCCCGCCGCTACACCCGCTTC 900
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      AAGAAGCGCTCCGCCGACTTCCACGGCCGGGCCGCCGAGCTCGTCCACGCGCTCCGCGGC 960
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ACGGCCGTCCCGAAGAGGCAGCCCCTCAAGGGTCAGGCCAGGGTAGCCGCGCTCCGGGAG 1020
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CTGCGGTCCCTCGCCGCCGCCCACCAGTCCGTGACCAAGGCCATCGCCGAGGCCGGCGGC 1080
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GTCGGGCTGTTGACCTCCCTCCTCGGCCCCTTCACGTCACACGCCGTGGGGTCCGAGGCG 1140
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GTCGCCATTCTTGTGAGCGGCGTGCCGCTCGACGCCGACGCCAAGGCCGCATTGATGCAG 1200
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CCGGCGAAGGTGTCGCTCTTGGTGGACATGCTCAATGAGGGTGCGGTGGACACCAAGATC 1260
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      AACTGCGTCCGCCTCATCCGCATACTCATGGAGGAGAAAGGCTTCCGGCCGGACACAGTA 1320
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GCCAGCCTGAGCCTGCTAGTTGGAGTCATGCGCCTCGTTCGAGACAAGCGGCATCCGGAC 1380
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GGCGTCGCTGCGGGGCTTGAGCTGCTCAATTCGATATGCGCAGTGCACAAGCCTGCAAGA 1440
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      AGTTTGATTGTTAGCATCGGTGCGGTTCCGCAACTAGTAGAATTGCTGCCAGAGCTGCCA 1500
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ACGGAGTGTGTAGAGCCAGCCTTGGATATCTTGGATGCGCTTGCCGCAGTCCCGGAGGGT 1560
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CGGATAGCGCTGAAGGATTGCCCCAGGACGATAACCAATGCTGTGAGATTGTTGATGAGG 1620
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GTTTCAGAAGCATGCACACGGCGAGCTTTGTCAATGCTGTGGGTGGTGTGTAGGATGGCG 1680
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CCTGAAGAATGCGCGCCGGCTGCTCTAGATGCCGGGCTTGGGGCCAAGCTTCTCTTGGTC 1740
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ATACAGAGTGGGTGCGGACCAGAGCTGAAACAGCAAGCGTCCGAACTGCTCAAGCTGTGC 1800
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ACCATGAATTGCACATCGACGGTATTCATCTCCAAGTGCAAGCTTACGAAGACAATCCAG 1860
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      TGAGTGGAGTTTGGAATTGTGCTGTTCCGCTTGTGATTTGGTCGATGGTGAATGGTTCAC 1920
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      CTGTTGGGTCTCACATAATCTGAAGAAATGGCAGCAATTAGCAATTGGCAGTCGACAGCG 1980
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      TCTATGTATAGATAAACTTTGCAGTTATGCAGAATTTGCCATGTCATCTGATGGCATAAG 2040
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GGTGGATGATATGAGTAGATTGTGAGACCTGTGGCCATGTTATCACTGTCCAGCGAGATG 2100
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      ATGCGTATCGCAGCATTCAAAATGCAGCATACACACAGCTAATTCAGTGGCAAGCAGGTG 2160
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GGATGTACATGCAAATTGATGAGGATTTTGGTCAGCTCAATAAGCACTCGAGGCTGGGAG 2220
consensus_11762#1      ------------------------------------------------------------
                                                                                   

consensus_11762#0      GTGGTAAGTACAGCCAGTTTTGCCATTGGTAGTAGAAAAATTAAGCAAGAAACCTGCTGT 2280
consensus_11762#1      ------------------------------------------------GTGAGCCATCGT 12
                                                                       *  * *    **

consensus_11762#0      TTTAGATTTTCGGCAATGTGGGTCTTTCAGGGCTGTAGATGTTCTTCCTTTTTCTCATCT 2340
consensus_11762#1      GATGGATTTGNGTGTCCTTCCCTGTGTATGTGCCTTGCACTGCCTTTGTCGGGGTTGTGA 72
                         * *****  *      *   * * *  * **  *  *    ***  *     *  *  

consensus_11762#0      TCGGTGTAATTGATGGTA--TAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAA 2398
consensus_11762#1      AAATTGTGACTTNTGGTAACTAAACTGGGTAGAATTGTATACAGTACTGTTGCTTCATAA 132
                           *** * *  *****  ****************************************

consensus_11762#0      TTG-AAATACACATTGCCATAGGCCATATCTGGGAAAAAAAA 2439
consensus_11762#1      TTGCAAATACACCTTGCCATAGGCCATATCTTGGAAAAAA-- 172
                       *** ******** ****************** ********