These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11771#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1947 fasta sequence [AAGGTGCGAGACAGTTGCCCGCTCTACCACCACGACGGCCGCACCGTGGACATGAAGCTGGACAGGAGCATGGATCTGGTGTTCAACACGCTTCTAGAACACGCCACCCGGCTGCGAGAGTATCTCAAGAAGGCAGCCGAGGGGATCTCGCTAGGGGAAGGTATAGAGAGGCTGAGACGCTTTTACAAGGTGGCGAAAAGCGTCGAGGAGAGGGAGGTTCTGGACTGGCATTTGGCTAACCTGGAATTCTCCAATGCCGGCTGCCTATCGGAGCTCTCGCTCGCGCACTGGGACCAGGATGACCAGTATGAGATGGGGGGAGACCATTGCTTCCTAGCCGGAGGGAATGCGAGGCTGGTACACGCATTGTGCGATGGTGTGCCGGTGTTGTATGAGAAGACGGTGAAGCGGATTGAGCATGGGGAGGATGGGGTGAGCATCACCGTGGAAGGAGGCCAGGTTTTCAAGGCTGACATGGCACTCTGCACTGCTCCACTTGGAGTGCTCAAGAGCAGGAGCATCATTTTTGAACCGGAGTTGCCAGAGAGGAAGCTTGAAGCAATCCAGAGGTTGGGGTTTGGGTTGTTGAACAAAGTCGCCATGGTGTTTCCCCATGTATTTTGGGATGAGGAGATTGACACATTTGGGTGTTTGAATAAGGAGAGGAGCAAGCGTGGCGAGTTCTTTCTCTTCTACAGCTACCACACTGTCTCTGGTGGTGCGGTACTTATCGCACTTGTTGCGGGAGAAGCTGCTTTGGAGTTTGAAAAGGTTGATCCTGCTGTAGCACTTCATAGGGTCCTTGGTATTCTTAAAGGTATCTATGGCCCCAAAGGTGTTACAGTGCCTGATCCCATTCAATCATGTTGCACAAGATGGGGTAGTGATCCTCTTTGCTCAGGTTCATACTCTCACATCAGAGTTGGGTCTTCTGGCACTGACTATGATATTCTCGCTGAGAGCGTCAATGACCGGTTATTCTTTGCTGGAGAAGCAACAAATCGTGCATACCCTGCAACAATGCATGGAGCTTTATTGAGTGGACTAAGGGAAGCTTCCAAGATTCTCCATGCTTCGGAAAGTAGATTGAATTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCCTATATTACACCTGAGGAGGAACAGGCTCCGGGATTGGCTAGGATTACACTTGAGAAGCCTTTGCTTCTGCCTTCCAAGAAACGCAAAGTAAAGGGTAATCAGAAGGATCAGGACCCTGTGGCTGAGAAGATAGACCAAGAGGTGTTTTATTTATACGCCACCGTCTCGCAAGAGCAAGCAACTGAACTATTGGAATGCGACAATG-AT-AAAAGTAGGATAGC-AGTTCTAT-GCA-AAGATCTTGGTGTTAAACTAATGGGTTACGACA-GTACATACGATGTATGTAGTCATCTGATTTCTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA-AGATCCTCCCTGCCATTTGTAACA-TGGCAGTCATCAGTCATCTGGCCTCCCTCAGTAGATTAGAACTTAGATGCACTGATAAATTTCAATGAATAGTTTGGTTGCAGGTACTATTGGATTCTTTTAGGGAGGCTACTATTGTTTTCATCTTCCCCCTTTTTTTTCTAGATGTTGTTCCTATATTGGTATCTGGCAGTTTATGTGTTGCTGAAATGGTGGATAAGCTCACTTCTGGACCAGTTTAAAAAA] [+] EMBL AK120532 [AAGGTGCGAGACAGTTGCCCGCTCTACCACCACGACGGCCGCACCGTGGACATGAAGCTGGACAGGAGCATGGATCTGGTGTTCAACACGCTTCTAGAACACGCCACCCGGCTGCGAGAGTATCTCAAGAAGGCAGCCGAGGGGATCTCGCTAGGGGAAGGTATAGAGAGGCTGAGACGCTTTTACAAGGTGGCGAAAAGCGTCGAGGAGAGGGAGGTTCTGGACTGGCATTTGGCTAACCTGGAATTCTCCAATGCCGGCTGCCTATCGGAGCTCTCGCTCGCGCACTGGGACCAGGATGACCAGTATGAGATGGGGGGAGACCATTGCTTCCTAGCCGGAGGGAATGCGAGGCTGGTACACGCATTGTGCGATGGTGTGCCGGTGTTGTATGAGAAGACGGTGAAGCGGATTGAGCATGGGGAGGATGGGGTGAGCATCACCGTGGAAGGAGGCCAGGTTTTCAAGGCTGACATGGCACTCTGCACTGCTCCACTTGGAGTGCTCAAGAGCAGGAGCATCATTTTTGAACCGGAGTTGCCAGAGAGGAAGCTTGAAGCAATCCAGAGGTTGGGGTTTGGGTTGTTGAACAAAGTCGCCATGGTGTTTCCCCATGTATTTTGGGATGAGGAGATTGACACATTTGGGTGTTTGAATAAGGAGAGGAGCAAGCGTGGCGAGTTCTTTCTCTTCTACAGCTACCACACTGTCTCTGGTGGTGCGGTACTTATCGCACTTGTTGCGGGAGAAGCTGCTTTGGAGTTTGAAAAGGTTGATCCTGCTGTAGCACTTCATAGGGTCCTTGGTATTCTTAAAGGTATCTATGGCCCCAAAGGTGTTACAGTGCCTGATCCCATTCAATCATGTTGCACAAGATGGGGTAGTGATCCTCTTTGCTCAGGTTCATACTCTCACATCAGAGTTGGGTCTTCTGGCACTGACTATGATATTCTCGCTGAGAGCGTCAATGACCGGTTATTCTTTGCTGGAGAAGCAACAAATCGTGCATACCCTGCAACAATGCATGGAGCTTTATTGAGTGGACTAAGGGAAGCTTCCAAGATTCTCCATGCTTCGGAAAGTAGATTGAATTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCCTATATTACACCTGAGGAGGAACAGGCTCCGGGATTGGCTAGGATTACACTTGAGAAGCCTTTGCTTCTGCCTTCCAAGAAACGCAAAGTAAAGGGTAATCAGAAGGATCAGGACCCTGTGGCTGAGAAGATAGACCAAGAGGTGTTTTATTTATACGCCACCGTCTCGCAAGAGCAAGCAACTGAACTATTGGAATGCGACAATG AT AAAAGTAGGATAGC AGTTCTAT GCA AAGATCTTGGTGTTAAACTAATGGGTTACGACA GTACATACGATGTATGTAGTCATCTGATTTCTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA AGATCCTCCCTGCCATTTGTAACA TGGCAGTCATCAGTCATCTGGCCTCCCTCAGTAGATTAGAACTTAGATGCACTGATAAATTTCAATGAATAGTTTGGTTGCAGGTACTATTGGATTCTTTTAGGGAGGCTACTATTGTTTTCATCTTCCCCCTTTTTTTTCTAGATGTTGTTCCTATATTGGTATCTGGCAGTTTATGTGTTGCTGAAATGGTGGATAAGCTCACTTCTGGACCAGTTT ] [+] EMBL AK066792 [AAGGTGCGAGACAGTTGCCCGCTCTACCACCACGACGGCCGCACCGTGGACATGAAGCTGGACAGGAGCATGGATCTGGTGTTCAACACGCTTCTAGAACACGCCACCCGGCTGCGAGAGTATCTCAAGAAGGCAGCCGAGGGGATCTCGCTAGGGGAAGGTATAGAGAGGCTGAGACGCTTTTACAAGGTGGCGAAAAGCGTCGAGGAGAGGGAGGTTCTGGACTGGCATTTGGCTAACCTGGAATTCTCCAATGCCGGCTGCCTATCGGAGCTCTCGCTCGCGCACTGGGACCAGGATGACCAGTATGAGATGGGGGGAGACCATTGCTTCCTAGCCGGAGGGAATGCGAGGCTGGTACACGCATTGTGCGATGGTGTGCCGGTGTTGTATGAGAAGACGGTGAAGCGGATTGAGCATGGGGAGGATGGGGTGAGCATCACCGTGGAAGGAGGCCAGGTTTTCAAGGCTGACATGGCACTCTGCACTGCTCCACTTGGAGTGCTCAAGAGCAGGAGCATCATTTTTGAACCGGAGTTGCCAGAGAGGAAGCTTGAAGCAATCCAGAGGTTGGGGTTTGGGTTGTTGAACAAAGTCGCCATGGTGTTTCCCCATGTATTTTGGGATGAGGAGATTGACACATTTGGGTGTTTGAATAAGGAGAGGAGCAAGCGTGGCGAGTTCTTTCTCTTCTACAGCTACCACACTGTCTCTGGTGGTGCGGTACTTATCGCACTTGTTGCGGGAGAAGCTGCTTTGGAGTTTGAAAAGGTTGATCCTGCTGTAGCACTTCATAGGGTCCTTGGTATTCTTAAAGGTATCTATGGCCCCAAAGGTGTTACAGTGCCTGATCCCATTCAATCATGTTGCACAAGATGGGGTAGTGATCCTCTTTGCTCAGGTTCATACTCTCACATCAGAGTTGGGTCTTCTGGCACTGACTATGATATTCTCGCTGAGAGCGTCAATGACCGGTTATTCTTTGCTGGAGAAGCAACAAATCGTGCATACCCTGCAACAATGCATGGAGCTTTATTGAGTGGACTAAGGGAAGCTTCCAAGATTCTCCATGCTTCGGAAAGTAGATTGAATTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCCTATATTACACCTGAGGAGGAACAGGCTCCGGGATTGGCTAGGATTACACTTGAGAAGCCTTTGCTTCTGCCTTCCAAGAAACGCAAAGTAAAGGGTAATCAGAAGGATCAGGACCCTGTGGCTGAGAAGATAGACCAAGAGGTGTTTTATTTATACGCCACCGTCTCGCAAGAGCAAGCAACTGAACTATTGGAATGCGACAATG AT AAAAGTAGGATAGC AGTTCTAT GCA AAGATCTTGGTGTTAAACTAATGGGTTACGACA GTACATACGATGTATGTAGTCATCTGATTTCTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA AGATCCTCCCTGCCATTTGTAACA T ] [+] EMBL CB652727 [AAGGTGCGAGACAGTTGCCCGCTCTACCACCACGACGGCCGCACCGTGGACATGAAGCTGGACAGGAGCATGGATCTGGTGTTCAACACGCTTCTAGAACACGCCACCCGGCTGCGAGAGTATCTCAAGAAGGCAGCCGAGGGGATCTCGCTAGGGGAAGGTATAGAGAGGCTGAGACGCTTTTACAAGGTGGCGAAAAGCGTCGAGGAGAGGGAGGTTCTGGACTGGCATTTGGCTAACCTGGAATTCTCCAATGCCGGCTGCCTATCGGAGCTCTCGCTCGCGCACTGGGACCAGGATGACCAGTATGAGATGGGGGGAGACCATTGCTTCCTAGCCGGAGGGAATGCGAGGCTGGTACACGCATTGTGCGATGGTGTGCCGGTGTTGTATGAGAAGACGGTGAAGCGGATTGAGCATGGGGAGGATGGGGTGAGCATCACCGTGGAAGGAGGCCAGGTTTTCAAGGCTGACATGGCACTCTGCACTGCTCCACTTGGAGTGCTCAAGAGCAGGAGCATCATTTTTGAACCGGAGTTGCCAGAGAGGAAGCTTGAAGCAATCCAGAGGTTGGGG ] [+] EMBL CB619128 [AAGGTGCGAGACAGTTGCCCGCTTTACCACCACGACGGCCGCACCGTGGACATGAAGCTGGACAGGAGCATGGATCTGGTGTTCAACACGCTTCTAGAACACGCCACCCGGCTGCGAGAGTATCTCAAGAAGGCGGCCGAGGGGATCTCGCTAGGGGAAGGGATAGAGAGGCTGAGACGCTTTTACAAGGTGGCGAAAAGCGTCGAGGAGAGGGAGGTTCTGGACTGGCATTTGGCTAACCTGGAATTCTCCAATGCCGGCTGCCTATCGGAGCTCTCGCTCGCGCACTGGGACCAGGATGACCAGTATGAGATGGGGGGAGACCATTGCTTCCTAGCCGGAGGGAATGCGAGGCTGGTACACGCATTGTGCGATGGTGTGCCGGTGTTGTATGAGAAGACGGTGAAGCGGATTGAGCATGGGGAGGATGGGGTGA ] [+] EMBL AU183938 [ AGGTTGATCCTGCTGTAGCACTTCATAGGGTCCTTGGTATTCTTAAAGGTATCTATGGCCCCAAAGGTGTTACAGTGCCTGATCCCATTCAATCATGTTGCACAAGATGGGGTAGTGATCCTCTTTGCTCAGGTTCATACTCTCACATCAGAGTTGGGTCTTCTGGCACTGACTATGATATTCTCGCTGAGAGCGTCAATGACCGGTTATTCTTTGCTGGAGAAGCAACAAATCGTGCATACCCTGCAACAATGCATGGAGCTTTATTGAGTGGACTAAGGGAAGCTTCCAAGATTCTCCATGCTTCGGAAAGTAGATTGAATTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCCTAT ] [-] EMBL CB652728 [ CAAGATTCTCCATGCTTCGGAAAGTAGATTGAATTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCCTATATTACACCTGAGGAGGAACAGGCTCCGGGATTGGCTAGGATTACACTTGAGAAGCCTTTGCTTCTGCCTTCCAAGAAACGCAAAGTAAAGGGTAATCAGAAGGATCAGGACCCTGTGGCTGAGAAGATAGACCAAGAGGTGTTTTATTTATACGCCACCGTCTCGCAAGAGCAAGCAACTGAACTATTGGAATGCGACAATG AT AAAAGTAGGATAGC AGTTCTAT GCA AAGATCTTGGTGTTAAACTAATGGGTTACGACA GTACATACGATGTATGTAGTCATCTGATTTTTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTTTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTTTTTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA AGATCCTCCCTGCCATTTGTAACA TGGCAGTCATCAGTCATCTGGCCTCCCTCAGTAGATTAGAACTTAGATGCACTGATAAATTTAAAGGGATAGTTTG ] [-] EMBL CB619129 [ TTCTGATTATAAGAAGTATGCCCTGCAGAAAAGCATCAGACTTATAAATAATGTACTGGACGACCTTTTCATGGAGCCAGATCTAGAATGTGGAAGATTCTCGTTCGTGTTCTCTTATATTACACCTGAGGAGGAACAGGCTCCGGGATTGGCTAGGATTACACTTGAGAAGCCTTTGCTTCTGCCTTCCAAGAAACGCAAAGTAAAGGGTAATCAGAAGGATCAGGACCCTGTGGCTGAGAAGATAGACCAAGAGGTGTTTTATTTATACGCCACCGTCTCGCAAGAGCAGGCAACTGAACTAATGGAATGTGACGATG AT AAAAGTAGGATAGC AGTTCTAT GCA AAGATCTTGGTGTTAAACTAATGGGTTACGACA GTACATACGATGTATGTAGTCATCTGATTTCTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA AGATCCTCCCTGCCATTTGTAACA TGGCAGTCATCAGTCATGTGGCCTCCCTCAGTAGATTAGAACTTAGATGCACTGATAAATTTCAATGAATAGTTTGGTTGCAGGTACTATTGGATTCTTTTAGGGAGGCTACTATTGTTTTCATCTTCCCCCTTTTTTTTCTAGATGTTGTTCCTATATTGGTATCTGGCAGTTTAT ] [+] EMBL BM422027 [ AATGAATAAAAAGTAGGATACCAAGTTCTATGGCACAAGAT TTGGTGTTAAACTAATGGGTTACGACACGTACATACGATGTATGTAGTCATCTGATTTCTAGCATCTCGAGAGCTCAGAAAGCCAGGAAAAGGTTGCAGGGACCGAAGAGCTTGAAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAAAAGAACCCCATATTTTCTCTTTTGGTTTGGGCCCAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCANAGATCCTCCCTGCCATTTGTAACACTGGCAGTCATCAGTCATGTGGCCTCCCTCAGTAGATTAGAACTTAGATGCACTGATAAATTTCAATGAATAGTTTGGTTGCAGGTACTATTGGATTCTTTTAGGGAGGCTACTATTGTTTTCATCTTCCCCCTTTTTTTTCTAGATGTTGTTCCTATATTGGTATCTGGCAGTTTATGTGTTGCTGAAATGGTGGATAAGCTCACTTCTGGACCCAAAAAAAAAA] [+] EMBL AU101550 [ AAAACCGGACTTTGATCTGTACCGCTACTTTATTCTTGTTTGTAGAANNGNACCCCATATTTTCTCTTTTGGTTTGGGCCAAAAACTGGCTCATAGATTGTTCTCTAGTGTGCAAACTTTAGACGTGGGGCAGGAAAACCA AGATCCTCCCTGCCATTTGTAACA TGGCAGTCATCAGTCATCTGGCCTCCCTCNGTAGATTAGAACTTAGATGCACTGATAAATTTCAATGAATAGTTTGGTTGCAGGTACTAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||