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Oryza sativa
cluster # 11779 cluster # 11779       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11779#0 length = 1385 sequences # 7  
consensus_11779#1 length = 674 sequences # 1  
consensus_11779#2 length = 385 sequences # 1  

consensusID : consensus_11779#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1385
fasta sequence
                              [AGAATTTTTTTTTCTTCTAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGGGTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGGCAAGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGGACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTGGATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAAATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGT-GGATGGTGAATTCGCCAAGATACA-GGTCTCTGAATCCCCTGAAGATA-TTCCCATCTCTACGACTGCAACC-GTCCCCATTACTGATGAGGATTCCAGTCAGGC-GTCT-CCACCTGCCGCCTCTCCCAAAAAG-CCAGAACCTGCG-CAGGGG-TTGAT-ACTATGA-TTCCATT-GAT-ACATGAGTGTAAATAGACA-CGAAAT-GGTCGC-TGAATT--CAGG-CTGTAGTGTTGTTG-TGATCCTT-CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCA-ACCATTGATATACCATTTTGACATGGGATATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCACTGTAACTCGACATTAGTATTCCCTTTGAGGTTTATTTTGAATTGGTTATGACGTCCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK067019             [AGAATTTTTTTTTCTTCTAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGGGTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGGCAAGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGGACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTGGATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAAATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGT GGATGGTGAATTCGCCAAGATACA GGTCTCTGAATCCCCTGAAGATA TTCCCATCTCTACGACTGCAACC GTCCCCATTACTGATGAGGATTCCAGTCAGGC GTCT CCACCTGCCGCCTCTCCCAAAAAG CCAGAACCTGCG CAGGGG TTGAT ACTATGA TTCCATT GAT ACATGAGTGTAAATAGACA CGAAAT GGTCGC TGAATT  CAGG CTGTAGTGTTGTTG TGATCCTT CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCA ACCATTGATATACCATTTTGACATGGGATATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGT                                                                                      ]
[+] EMBL AI978288             [                                              AGTCAGCGGTTAGGGTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGGCAAGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTNCCACAATAGTTGATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTNNNTTAGCTGCTCTAGAGCCnnnnnata                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB000349             [                                                                                                                                                                                                                                                                                                                                   AGCTACCGATTATGAGCTACCAGCTTCTGTTTCTGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGGACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTGGATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAAATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGT GGATGGTGAATTCGCCAAGATACA GGTCTCTGAATCCCCTGAAGATA TTCCCATCTCTACGACTGCAACC GTCCCCATTACTGATGAGGATTCCAGTCAGGC GTCT CCACCTGCCGCCTCTCCCAAAAAG CCAGAACCTGCG CAGGGG TTGAT ACTATGA TTCCATT GAT ACATGAGTGTAAATAGACA CGAAAT GGTCGC TGAATT  CAGG CTGTAGTGTTGTTG TGATCCTT CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCA                                                                                                                                                                                                   ]
[-] EMBL CA759506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTNCAATAAGGTTGCCAATGCTGCAAATGATGTT GCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAAGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGT GGATGGTGAATTCGCCAAGATACA GGTCTCTGAATCCCCTGAAGATA TTCCCATCTCTACGACTGCAACC GTCCCCATTACTGATGAGGATTCCAGTCAGGG GTCT CCACCTGCCGCCTCTCCCAAAAAG CCAGAACCTGCG CAGGGG TTGAT ACTATGA TTCCATT GAT ACATGAGTGTAAATAGACA CGAAAT GGTCGC TGAATT  CAGG CTGTAGTGTTGTTG TGATCCTT CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCA ACCATTGATATACCATTTTGACATGGGATATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCACTGTAACTCGACATTAGTATTCCCTTTGAGGTTTATTTTGAATTGGTTATGACGTCCAAAAAAAAAAAA           ]
[+] EMBL BI808833             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAC AAAGGATGTGGGATGGTGAATTCCCCAAGATACAGGGTCTCTGAATCCCCTGAAGATAGTTCCCATCTGTACGACTGCAACCGGTCCCCATTACTGATGAGGATT CATTCAGGCGGTCTCCCACCTGCCGCCTCTCCCCAAAAGCCCAGAACCTGCGCCAGGGGTTTGATAACTATGAGTTCCATTGGATAACATGAGTGTAAATAGACACCGAAATGGGTCGCTTGAATTTCCAGGCCTGTAGTGTTTTTGTTGATCCTTCCAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCACACCATTGATATACCCTTTTGACCTGGGATATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCAaaaaaaaaa                                                                       ]
[-] EMBL AI978289             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             nATCCCCTGAAGATA TNCCCATCTCTACGACTGCAACC GTCCCCATTACTGANNAGGATTCCAGTCAGNN NNNT CCACCTGCCGCCTCTCCCAAAAAG CCAGAACCTNNG CAGGGG TTGAT ACTATGA TTCCATT GAT ACATGAGTGTAAATAGACA CGAAAT GGTCGC TGAATT  CAGG CTGTAGTGTTGTTG TGATCCTT CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCA ACCATTGATATACCATTTTGACATGGGATATTGNTGTGGATTTG                                                                                                                   ]
[+] EMBL AU161417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAACC GTCCCCATTACTGATGAGGATTCCAGTCAGGC GTCT CCACCTGCCGCCTCTCCCAAAAAG CCAGAACCTNCG CAGGGG TTGAT ACTATGA TTCCATT GAT ACATGAGTGTAAATAGACA CGAAAT GGTCGC TGAATT  CAGG CTGTAGTGTTGTTG TGATCCTT CAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCATTAGCGACCTTCTTAATAGGCACCA ACCATTGATATACCATTTTGACATGGGATATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCACTGTAACTCGACATTAGTATTCCCTCTGAGGTTTATTTTGAATTGGTTATGACGTCCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11779#0 AGAATTTTTTTTTCTTCTAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGG GTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGGCAAGCACTTTTAGCACAGTCAAG GTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCT GGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATT ACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTT GATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCT GCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGG ACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTG GATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAA ATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAA ATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAG AGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCA TGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCA AAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCT AACAGCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAG GTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGAT GAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAG GGGTTGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCGCTGAA TTCAGGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGATTTGGG ACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGC ATTAGCGACCTTCTTAATAGGCACCAACCATTGATATACCATTTTGACATGGGATATTGA TGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCACTGTAACTCGACATT AGTATTCCCTTTGAGGTTTATTTTGAATTGGTTATGACGTCCAAAAAAAAAAAAAAAAAA AAAAA



consensusID : consensus_11779#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [GTTTAAGCGAGAAGATCAGTGTTGGCACTTNGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGGGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAGGGGTTGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCGCTGAATTCAGGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCCTTAAAAAAAAAAAAAAA]

[-] EMBL CA759507             [GTTTAAGCGAGAAGATCAGTGTTGGCACTTNGGCTGTAAATGATAAAGTGAAGGAAATGGATCAGAAATACCAAGTCTCTGGGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACAGCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAGGGGTTGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCGCTGAATTCAGGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCCTTAAAAAAAAAAAAAAA]


>consensus_11779#1 GTTTAAGCGAGAAGATCAGTGTTGGCACTTNGGCTGTAAATGATAAAGTGAAGGAAATGG ATCAGAAATACCAAGTCTCTGGGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAGAGTG TCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCATGGG TAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCAAAGG AAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCTAACA GCTCAGAAGGCCATGGAACACAAAAGGATGTGGATGGTGAATTCGCCAAGATACAGGTCT CTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTACTGATGAGG ATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTGCGCAGGGGT TGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCGCTGAATTCA GGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGATTTGGGACCT GGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTTCTTGCCTTA AAAAAAAAAAAAAA



consensusID : consensus_11779#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 385
fasta sequence
                              [TNCNTNTCNTNAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGGGTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGGCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTNGNCCTTCAA]

[+] EMBL C97726               [TNCNTNTCNTNAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGGGTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTGCATGTTGAAATGCAAAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATTGTCACGGCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAGGATAGTAAGCCTTCTNGNCCTTCAA]


>consensus_11779#2 TNCNTNTCNTNAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGGGTTCCGA GATCTCCGCCTCGCACGGCAGCCATGGCGCACTTTTAGCACAGTCAAGGTGAGCAATGTG TCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCTGGTGACATTGTG CATGTTGAAATGCAAAGTGATGAGCTGTCTCAAGTTGCCTACATTACTTTTAAAGACAAT CAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTTGATATGGCTGTCATT GTCACGGCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCTGCTCTAGAGCCCAAG GATAGTAAGCCTTCTNGNCCTTCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11779#0      AGAATTTTTTTTTCTTCTAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCGGTTAGG 60
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GTTCCGAGATCTCCGCCTCGCACGGCAGCCATGGCGGCAAGCACTTTTAGCACAGTCAAG 120
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GTGAGCAATGTGTCACTGAAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTTCT 180
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GGTGACATTGTGCATGTTGAAATGCAAAGCAGTGATGAGCTGTCTCAAGTTGCCTACATT 240
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ACTTTTAAAGACAATCAAGGATCTGAGACGGCTATGCTTCTTACGGGTGCCACAATAGTT 300
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GATATGGCTGTCATTGTCACGCCAGCTACCGATTATGAGCTACCAGCTTCTGTTTTAGCT 360
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GCTCTAGAGCCCAAGGATAGTAAGCCTTCTGCCCTTCAAAAGGCAGAGGACATTGTTGGG 420
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ACCATGCTGGCCAAGGGATTCATTTTAGGTAGGGATGCACTGGACAGAGCAAAAGCCTTG 480
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      GATGAGAAGCATCAACTCACATCAACTGCAACTGCTAGAGTATCTTCCTTTGACAAGAAA 540
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ATGGGTTTAAGCGAGAAGATCAGTGTTGGCACTTCGGCTGTAAATGATAAAGTGAAGGAA 600
consensus_11779#1      ----GTTTAAGCGAGAAGATCAGTGTTGGCACTTNGGCTGTAAATGATAAAGTGAAGGAA 56
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ATGGATCAGAAATACCAAGTCTCTGAGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAG 660
consensus_11779#1      ATGGATCAGAAATACCAAGTCTCTGGGAAGACAAGGTCAGCACTGGCAGCTGCTGAACAG 116
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      AGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCA 720
consensus_11779#1      AGTGTCTCTACTGCTGGATCTGCCATCATGAAGAACAGGTATGTCCTTACTGGAGCAGCA 176
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      TGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCA 780
consensus_11779#1      TGGGTAACTGGTGCTTTCAATAAGGTTGCCAATGCTGCAAATGATGTTGGCACAAAAGCA 236
consensus_11779#2      ----------------------------------------------------TNCNTNTC 8
                                                                                   

consensus_11779#0      AAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCT 840
consensus_11779#1      AAGGAAAAAATAGCATCTGAGCAGGAGCACAAGACTGTAGAGCTTGAGTCTGCAGAACCT 296
consensus_11779#2      NTNAATTTTCTTCTTCCCGTTTCCCGACTCAAGTCAGCG--GTTAGGGTTCCGAGATCTC 66
                           *     *     * *        * **** * *    * * * **    *** *  

consensus_11779#0      AACAGCTCA-GAAGGCCATGGAACAC----AAAAGGATGTGGATGGTGAATTCGCCAAGA 895
consensus_11779#1      AACAGCTCA-GAAGGCCATGGAACAC----AAAAGGATGTGGATGGTGAATTCGCCAAGA 351
consensus_11779#2      CGCCTCGCACGGCAGCCATGGCGCACTTTTAGCACAGTCAAGGTGAGCAATGTGTCACTG 126
                         *  * ** *   *******  ***    *  *   *   * **   ***  * **   

consensus_11779#0      TACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTA 955
consensus_11779#1      TACAGGTCTCTGAATCCCCTGAAGATATTCCCATCTCTACGACTGCAACCGTCCCCATTA 411
consensus_11779#2      AAAGCATCACTGCGAGATGTAAAGGAATTCTTTTCCTTTT--CTGGTGACATTGTGCATG 184
                        *    ** ***       * ***  ****   **  *    ***    * *      * 

consensus_11779#0      CTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTG 1015
consensus_11779#1      CTGATGAGGATTCCAGTCAGGCGTCTCCACCTGCCGCCTCTCCCAAAAAGCCAGAACCTG 471
consensus_11779#2      TTGAAATGCAAAGTGATGAGCTGTCTCAAGTTGCCTACATTACTT-----TTAAAGACAA 239
                        ***   * *      * **  ***** *  ****  *  * *         * *  *  

consensus_11779#0      CGCAGGGGTTGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCG 1075
consensus_11779#1      CGCAGGGGTTGATACTATGATTCCATTGATACATGAGTGTAAATAGACACGAAATGGTCG 531
consensus_11779#2      TCAAGGATCTGAGACGGCTATGCTTCT----TACGGGTGCCACAATAGTTGATATGGCTG 295
                          ***   *** **    ** *   *     * * ***  *  * *   ** ****  *

consensus_11779#0      CTGAATTCAGGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGAT 1135
consensus_11779#1      CTGAATTCAGGCTGTAGTGTTGTTGTGATCCTTCAAACTAAACCTCTTTGAAGTTTGGAT 591
consensus_11779#2      TCATTGTCACGGCAGCTACCGATTATGAGCTACCAGCTT----CTGTTTTAG--CTGCTC 349
                             *** *           ** *** *   **   *    ** *** *    **   

consensus_11779#0      TTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTT 1195
consensus_11779#1      TTGGGACCTGGAATAGGTTGCAGTTTGTAGCATCTATTTTTCTCAATTGAACATCATTTT 651
consensus_11779#2      TAGAGCCCAAGGATAGTAAGCCTTCTNGNCCTTCAA------------------------ 385
                       * * * **  * ****   **  * *    * ** *                        

consensus_11779#0      CTTGCATTAGCGACCTTCTTAATAGGCACCAACCATTGATATACCATTTTGACATGGGAT 1255
consensus_11779#1      CTTGCCTTAAAAAAAAAAAAAAA------------------------------------- 674
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ATTGATGTGGATTTGGTGGAATATATGAGAAATTATGTTTGAGTACTTCACTGTAACTCG 1315
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      ACATTAGTATTCCCTTTGAGGTTTATTTTGAATTGGTTATGACGTCCAAAAAAAAAAAAA 1375
consensus_11779#1      ------------------------------------------------------------
consensus_11779#2      ------------------------------------------------------------
                                                                                   

consensus_11779#0      AAAAAAAAAA 1385
consensus_11779#1      ----------
consensus_11779#2      ----------
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)