cluster # 11806

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Oryza sativa
cluster # 11806 cluster # 11806 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11806#0 length = 1914 sequences # 9
consensusID : consensus_11806#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1914
fasta sequence
                              [TCGTCCACGCCGAGACGAGACGAGACAGTCGGGCGACGGGACAGCAGCTGCAGCCTGCACTGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCATCCGCATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAAGGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGGTGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGG-AGAAACATTCACTTGACGCCCATAAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAATAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGAAGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGCAAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGACATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAACTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGC-TTCAGAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCAAGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCAGAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGATAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGG-CCAAAAAAGAAAAAGGCTGAAAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTCAAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAAGAAGATAATTCAAATTCATCA-GCTGAAGAAGATAATAAGAAAAAACGA-CAAGTAGCTCCAGCTTACGGGAAA-CGGGTGGAA-CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA-CCTA-CTGTGTATCGGAAGG-CAAAGATGGCTCCTGAGAG-CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAAGAAA-TTAAAGCAGTCAAGAAAAGAAAGGAAAGAGCAAAGGAACTCGAGGGCATAGATATGAGCAACATTATCACAAGTTCTCGTCGGAGAAGTACATCGAATTTCATACCCCTGCCAACGCCTAAAATAGTAGCTGATAGTGATGAAGATGACGAAGAAGACGCAGAAGATGACAATGATGAGGAGGTGAATGTGGAGGGTGGAGATGAAGGTGACAATGATGTTGGAAAAGCTGGCGATGGATCTGCTGATGATGCTGAGCACGACAGTGATTGATTCTTGCGGTTTCTAAGGTGGAAGCAGGCAATTCTGACCATGCAAGTTCATCTCATGTTGATTTGGCCTAGACGCCTAGTTGGCTGTCCGTGCGTGGATGGAGGCAGTTGTTTAGAAGTTTAACTTATGAGTTTATTCTGTTTATTCGAAACATATTCTTTAGCTCTAGCGTTGGTGAAACATTAGCGCAGATGATTCTTGTAGCTCCCATCTCATTATTATGTATAATATATATCAGGTTTGTTANCTGAATTTTCGANCGTGTANTCCTGTAGACTCTAGTTTGAAAACGGCGTGACANTCCTGTANCGGACAGTTATTTTATTAGTTCATCACTTATAGTGTTATTTTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK064128             [TCGTCCACGCCGAGACGAGACGAGACAGTCGGGCGACGGGACAGCAGCTGCAGCCTGCACTGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCATCCGCATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAAGGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGGTGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGG AGAAACATTCACTTGACGCCCATAAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAATAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGAAGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGCAAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGACATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAACTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGC TTCAGAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCAAGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCAGAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGATAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGG CCAAAAAAGAAAAAGGCTGAAAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTCAAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAAGAAGATAATTCAAATTCATCA GCTGAAGAAGATAATAAGAAAAAACGA CAAGTAGCTCCAGCTTACGGGAAA CGGGTGGAA CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA CCTA CTGTGTATCGGAAGG CAAAGATGGCTCCTGAGAG CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAAGAAA TTAAAGCAGTCAAGAAAAGGAAGGAAAGAGCAAAGGAACTCGAGGGCATAGATATGAGCAACATTATCACAAGTTCTCGTCGGAGAAGTACATCGAATTTCATACCCCTGCCAACGCCTAAAATAGTAGCTGATAGTGATGAAGATGACGAAGAAGACGCAGAAGATGACAATGATGAGGAGGTGAATGTGGAGGGTGGAGATGAAGGTGACAATGATGTTGGAAAAGCTGGCGATGGATCTGCTGATGATGCTGAGCACGACAGTGATTGATTCTTGCGGTTTCTAAGGTGGAAGCAGGCAATTCTGACCATGCAAGTTCATCTCATGTTGATTTGGCCTAGACGCCTAGTTGGCTGTCCGTGCGTGGATGGAGGCAGTTGTTTAGAAGTTTAACTTATGAGTTTATTCTGTTTATTCGAAACATATTCTTTAGCTCTAGCGTTGGTGAAACATTAGCGCAGATGATTCTTGTAGCTCCCATCTCATTATTATGTATAATATATATCAGGT                                                                                                                                         ]
[+] EMBL AK108583             [     CACGCCGAGACGAGACGAGACAGTCGGGCGACGGGACAGCAGCTGCAGCCTGCACTGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCATCCGCATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAAGGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGGTGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGG AGAAACATTCACTTGACGCCCATAAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAATAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGAAGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGCAAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGACATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAACTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGC TTCAGAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCAAGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCAGAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGATAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGG CCAAAAAAGAAAAAGGCTGAAAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTCAAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAAGAAGATAATTCAAATTCATCA GCTGAAGAAGATAATAAGAAAAAACGA CAAGTAGCTCCAGCTTACGGGAAA CGGGTGGAA CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA CCTA CTGTGTATCGGAAGG CAAAGATGGCTCCTGAGAG CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAAGAAA T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB639370             [                                                        GCACTGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCATCCGCATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAA GCCTTCCGCGCCCGCCTTCCCGACTTCATGAAGCAGGCCGACTCCTTAACCCTCGAAGGTGTAAGGAGAGCTCTGGAGAAGGACATGGGCTTGGTACAAACATTCACTTGACGCCCGTCAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU091756             [                                                                                                                                                                           GATCGAGAAGGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGGTGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGG AGAAACATTCACTTGACGCCCATAAAAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAATAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGAAGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGCAAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGACATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAACTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGC TTCAGAAGAAAGCTTTGGATGCTTACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BU672815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAGA ATCA GA GGA AC AAGAT ATAG TCT GCAGT ACATTAG GAA CTACGAT  AAAATGCTA TGTCAAAA GGCCTCATA TTTAGAGAG ACTCAG AACTATTACTTTAC AGGAGTTCCCCGGACTNTAGAAGAAGATCTCAAGCTTTCAGAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCAAGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCAGAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGATAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGGCCCAAAAAAGAAAAAGGCTGAAAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTCAAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAAGAAGATAATTCAAATTCATCA GCTCAAGAAGATAATAAGAAAAAACGA CAAGTAGCTCCAGCTTACGGGAAA CGGGTGGAA CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA CCTA CTGTGTATCGGAAGG CAAAGATGGCTCCTGAGAG CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCTAC AACCCCTCTGAAAAAGAAA TT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM421543             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCGTCAAGACTCTGATACTTCTGAAATAAATGATAGCCCTTGTGAGAGGGGAGACCGTGATGAGGATGCAAGG CCCAAAAAGAAAAAGGCTGAAAAGGGCCAAGCTGTAAAAAGGCAGAAAAAAACTACCGTGGAGAAACCACTGTCCAATTCCAAGGCTAAAAAGGTTGCCCAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGAAGAAGATAATTCAAATTCATCACGCTGAAGAAGATAATAAGAAAAAACGACCCAGTAGCTCCAGCTTACGGGAAACCGGGTGGAA CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCACCCTACCTGTGTATCGGAAGGCCCAAGATGGCTCCTGAGAGCCAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACCAACCCCTCTGAAAAAGAAACNTAAANCAGTCANAAAAAAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU181887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATTCATCA GCTGAAGAAGATAATAAGAAAAAACGA CAAGTAGCTCCAGCTTACGGGAAA CGGGTGGAACCGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA CCTA CTGTGTATCGGAAGG CAAAGATGGCTCCTGAGAG CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAAGAAA TTAAAGCAGTCAAGAAAAGAAAGGAAAGAGCAAAGGAACTCGAGGGCATAGATATGAGCAACATTATCACAAGTTCTCGTCGGAGAAGTACATCGAATTTCATACCCCTGCCAACGCCTAAAATAGTAGCTGATAGTGATGAAGATGACGAAGAAGACGCAGAAGATGACAATGATGAGGAGGTGAATGTGGAGGGTGGAGATGAAGGTGACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C28559               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATTCATCA GCTGAAGAAGATAATAAGAAAAAACGA CAAGTAGCTCCAGCTTACGGGAAA CGGGTGGAA CGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTATCGCA CCTA CTGTGTATCGGAAGG CAAAGATGGCTCCTGAGAG CAAGCGTGAAGCCTGTTTGATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAAAGAAA TTAAAGCAGTCAAGAAAAGAAAGGAAAGAGCAAAGGAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU091757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATGATG TGGAAAAACTGGCGATGGANCTGCTGATGATGCTGAGCACGACAGTGATTGATTCTTGCGGTTTCTAAGGTGGAANCAGGCAATTCTGACCATGCAAGTTCATCTCATGTTGATTTGGCCTANACGCCTAGTTGGCTGTCCGTGCGTGGATGGAGGCAGTTGTTCAGAAGTTTAACTTATGAGTTTANTCTGTTTANTCGAAACATATTCTTTAGCTCTANCGTTGGTGAAACATTAGCGCAGATGATTCTTGTAGCTCCCATCTCATTATTATGTATAATATATANCAGGTTTGTTANCTGAATTTTCGANCGTGTANTCCTGTAGACTCTAGTTTGAAAACGGCGTGACANTCCTGTANCGGACAGTTATTTTATTAGTTCATCACTTATAGTGTTATTTTAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11806#0
TCGTCCACGCCGAGACGAGACGAGACAGTCGGGCGACGGGACAGCAGCTGCAGCCTGCAC
TGCAGCACAGCCGTCAGCCGCCTCCCCAACCTCCCGCCGCCGCCGCCGCCGCCGCATCCG
CATGGAGCCCGACGCCGCAGCGGCCGCGGCCGCCGGCGAGAGGGAGGCGGAGATCGAGAA
GGCCTTCCGCGCCCGCCTCCCCGACTTCAGGAAGCAGGCCGACTCCTTAACCCTCGAAGG
TGTAAGGAGAGCACTGGAGAAGGACATGGGCTTGGAGAAACATTCACTTGACGCCCATAA
AAAGTTCATAAAGCAATGTGTAGACAAGGTTTTTTCTGGTTCTGATGATGACAATACGAA
TAATAATGCACCAGAGAAGGATGAAGCTAAAGATGACCGTTCTTCTAAAGAAGAATCAGA
AGATGCCCAACCAACATCTGACTCGAACAAAATTTCCTCCAATGCTGATGAGCCGGTGGC
AAAATCCAGTGAGACAGATAGAGATCAGGAGGGAGACAAAGATCATAGTTCTGGCAGTGA
CATTAGTGAAGCTACGATAAAAAATGCTATTGTCAAAAGGGCCTCATATTTTAGAGAGAA
CTCAGAAACTATTACTTTACAAGGAGTTCGCCGGACTTTAGAAGAAGATCTCAAGCTTCA
GAAGAAAGCTTTGGATGCTTACAAGTCTTTTATTTCGACGGAATTAGACAATATTCTTCA
AGAACCTGCAAATGGGACAAAGAAAACTAGTAAAACTGAATCTCATAAGGATTCTGGCCA
GAAGACAAGCAAAAACTCTAAGAGAGCTCGTCAAGACTCTGATACTTCTGAAATAAATGA
TAGCCATTGTGAGAGGGGAGACAGTGATGAGGATGCAAGGCCAAAAAAGAAAAAGGCTGA
AAAGGGCAAAGCTGTAAAAAGGCAGAAAAAAACTACAGTGGAGAAACAACTGTCAAATTC
AAAGGCTAAAAAGGTTGCCAAAAAAGATTTAGATAAAAGTAAAGAGCGGAGTGGATCAGA
AGAAGATAATTCAAATTCATCAGCTGAAGAAGATAATAAGAAAAAACGACAAGTAGCTCC
AGCTTACGGGAAACGGGTGGAACGGCTGAAGTCAATAATCAAATCTTGTGGAATGAGTAT
CGCACCTACTGTGTATCGGAAGGCAAAGATGGCTCCTGAGAGCAAGCGTGAAGCCTGTTT
GATAAAGGAGTTGGAGGATATACTTGAAAAAGAAGGATTGTCAACAAACCCCTCTGAAAA
AGAAATTAAAGCAGTCAAGAAAAGAAAGGAAAGAGCAAAGGAACTCGAGGGCATAGATAT
GAGCAACATTATCACAAGTTCTCGTCGGAGAAGTACATCGAATTTCATACCCCTGCCAAC
GCCTAAAATAGTAGCTGATAGTGATGAAGATGACGAAGAAGACGCAGAAGATGACAATGA
TGAGGAGGTGAATGTGGAGGGTGGAGATGAAGGTGACAATGATGTTGGAAAAGCTGGCGA
TGGATCTGCTGATGATGCTGAGCACGACAGTGATTGATTCTTGCGGTTTCTAAGGTGGAA
GCAGGCAATTCTGACCATGCAAGTTCATCTCATGTTGATTTGGCCTAGACGCCTAGTTGG
CTGTCCGTGCGTGGATGGAGGCAGTTGTTTAGAAGTTTAACTTATGAGTTTATTCTGTTT
ATTCGAAACATATTCTTTAGCTCTAGCGTTGGTGAAACATTAGCGCAGATGATTCTTGTA
GCTCCCATCTCATTATTATGTATAATATATATCAGGTTTGTTANCTGAATTTTCGANCGT
GTANTCCTGTAGACTCTAGTTTGAAAACGGCGTGACANTCCTGTANCGGACAGTTATTTT
ATTAGTTCATCACTTATAGTGTTATTTTAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case