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Oryza sativa
cluster # 11808 cluster # 11808       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11808#0 length = 3362 sequences # 3  
consensus_11808#1 length = 1250 sequences # 3  
consensus_11808#2 length = 564 sequences # 1  
consensus_11808#3 length = 482 sequences # 1  
consensus_11808#4 length = 115 sequences # 1  

consensusID : consensus_11808#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3362
fasta sequence
                              [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT]

[+] EMBL AK072098             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT]
[+] EMBL AK070190             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB625630             [TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACTTTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAGTATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCAATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTGCACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGCATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGATTGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_11808#0 TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACT TTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAG TATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCA ATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTG CACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGC ATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGAT TGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGA AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTAT TCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATC TTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAA ATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATG GCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAA GTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTC ATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGG TACAATTCCTAACTGTCATGTTATATCACAACAGTTATACTTGACATGCCCTTCTGTTCT TTATAACAACTCCTTTTTGTACATACACAACTACTTTATGCTGCTGCACATACTTGGAAG TGAATAGTGAACAACATAGCTTATATTAGCAGCCACAGCGACTAGAGCTGATGATGTTTC TTAGGAGTTAGCTTATGTAATTATGCTTAATCAGCAAGCTTGAAAACTGAGCATTTTGTC CTTTTTTTCCCTTGATCCTGTGACAGAGAAACCCAGTGGGTACTGGAAGCTAAATGCCTA AAATTTGCTGATCCTGGTGTACAGTTTAACTGTGCTCATATGGATAGTTAATACTCTATA ATACTTTAGTCTTCTAGAAGTGGAACATACTGTAAGAGACAGCTATCGTATGCATAACTT TTTTTTTGTATCATAGCTGAATACACCTTGGTATCATGAATAGACTTCAAAAAAAGTGAA AGACTTGAAAAGGACTATGTTAATACTTTAGTTTATTATTTAGTTAAGCTGCAGGATATT CAGAGGTATGAGTATGGACCCAGTATAAGTTAAATGTGTGTGCATATTAATGGCCAAAGT AAGATCGAATTTGACTGATACTAGATCTGGAATCAAATATGTTAATGGCCAAAGAACCTG AAAGGTACAGACGGAAATCCATTCCATACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCC TCCTCCTCCGATCTTGTCTATTACATTAATGCACACAAGAGAGCGTCTAAACATTAGGAC ATTTAAATTTCATTATATGTGCCAATCACGGAATCACCTGCCATGGAAGTGACTAAATAT TTTTTTTTCCTGTTAATAATATTTGTATGTCCTGGAATATCAATGGGATCAGTTCTGTTT GGAAGCATGATCTCTATATGACTTTATAAGGTGATGAAATGAAATGTTGTTTGCTTTGAA TGAAGAAACATTATTAACTTGTGTAGAATAGTTAGCTTGAAACGTTATGAGATTTGTGGT CTATTTTGTCTCCTTGAAAACCGTATGTATAAGTGGTACTTCTGTTCTAGATGCCCTGGT ACTTCAAAATAATAGGAATAAAAACAACAATTTAATTATCTTTTCTTTGTTATGAGCCTT GATTCCAGATTTCAGGACTTGGGAGCATTGCCGTGGCAAACTAGTACTAAGTATGCCCAG AGTTTAACGAATCTTAGTTTGTACTCATTGTCCCATACAATTCATGCAACTGATAACAAA TATGCTTGTTGAAATCTGTCGAATATACAGCTGGCTCTTTTCATGTGTCAGGTTCTAATT GTATTATTGGAGCCAACTTCATAGCATTACTGCAATATTGTTTGCCAATAGTTTCAATTC CACTCCAAATGAACTATGTTACCTACTCTCTCTGTCCACAAATATAAGGGGATTTTAGCT ATGCACCTGGGAGCACTTGTCCATGTATATAGTCAAAATACCTTATATGTGGACGGAGGG CCTGATCCTTGGTGAATTATGATACTGTTCTAATTCAAGAGTTAGTTTATGAACATGATA ATTTGTTCAGTTATTTAAACTTGTAACTCATGTTCTCACAGATCTGGACAAATTCTCTTC TTTATGACTCATTTCCTTTACTTTTGACATTTCAGTAAGGCATCGTTTGCTCCGAGTTAG CTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAG TCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTG AAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGG TTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGT AATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGC AAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTATGTGTACATG TATATATATGTGCTTAGAAGTTAGAAGTTGATCCCTTTCTGGACTGCTTACATGGCAGTC TT



consensusID : consensus_11808#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1250
fasta sequence
                              [TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGACCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA]

[+] EMBL AK059035             [TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAG                                                                                                                                                                                                                   ]
[-] EMBL CB625631             [                                                                                                                                                                                                                                                                                                                 GTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGA                                                                                                                 ]
[-] EMBL CB659706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATCTGCATATAGAGGTATGTCTGATGTATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAACTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA]


>consensus_11808#1 TGAAAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAAC GTCTTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATT TAGTGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTG CATTGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTC CATCTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGA AAGACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGG GCTGTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCA GGACAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGATG TATTCTGGAGAACGCTACAGCATGAGGGTGTTTCTGGATTCTACAAAGGAATCCTACCAA ATCTTCTTAAAGTGGTGCCTGCAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGA AAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGAC ATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTT GAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATT TTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTAC TGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTG CCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAA CTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGAC GAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATG CCAAAAAAGTCAAGGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATAAAAAGACCT TATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTAAA ATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA



consensusID : consensus_11808#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 564
fasta sequence
                              [CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAAAAAAAAAAAAAAC]

[-] EMBL CF323204             [CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAATTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGCGATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAAAAAAAAAAAAAAC]


>consensus_11808#2 CAGCAAGTATTACCTACCTAGTGTATGAAGCAATGAAGAAAAATCTCTCCCTTGATTGAA TTACGGAGCTGTTTGGCAAATCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAAT GACGATACATGATTTTACTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTC AGGACAGAATTTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCCAGAAATGAAGC GATAACCATCAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCG AGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTT TGTTAGTCAAACTGTAAAACACAGGAAAACACTCTTTAACTTAATTTACCATTCCTTGTG CTCCTGAAATTAAAGAGGAGCTTGACCTTTACTGACGACGAAATTGCCCTGCAGAAAGGG TGCTGGTTATACATGCCTGTATTGCCCCTTGGCTACATGCCAAAAAAGTCAATGCCTACT GTATGTAATAAAAAAAAAAAAAAC



consensusID : consensus_11808#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence
                              [GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGTAC]

[+] EMBL CA753376             [GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGTAC]


>consensus_11808#3 GGGGCACATGTGTTACCCTTTACAGGTATCAGGACAGACTGCAGCTCAACGAGCCAATTC AGAATCTGCATATAGAGGTATGTCTGAATGTATTTCTGGGAGAACGCTACAGCATTGAAG GGGTGTNNNTTCTGGATTCTACAAAGGAATCCTACCAAATCTTCTTAAAGTGGTGCCTGC CAGCAAAGTATTGACCCTACCTAGGTGGTATTGGAAGCAAATGGAAAGAAAAAATCTCTC CCCTTGGATTGGAAATTACGGGAGGCTGGTGTGGCAAAATCGGCCATCATTTATAGACAT GGCTGACTGTAGAGATAATGACGATACCATGATNTTTACTTGGTTAAGTAGCTACTTTTT TGAGGTGCAAGACGGTGCCTCCAGGACAGAATNTGAAGCTATGGTGGCATCTCTCTAAAT GTTCATNTCCCCAGAAATGAAGCGATAACCATCAGATCATGGAGACATCTNNGCTGGCGT AC



consensusID : consensus_11808#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 115
fasta sequence
                              [GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA]

[+] EMBL CF324970             [GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA]


>consensus_11808#4 GGTTTTTTTTTTTTTTTTTTTTTTAATTAAACAGGGTAACCATAAGGAAGTTATATTGGT AAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTGGCATGTACCCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11808#0      TTGTCGAGCATGTGGACAAGGACAACAATGGAATTATTACTTTTGAAGAGTGGAGGGACT 60
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCTTTTGCTATATCCTAATGAAGTAACCATTGAGAATATTTATCATCACTGGGAAAGAG 120
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATGTCTTGTAGATATAGGTGAACAGGCTGTTATACCAGAAGGCATAAGTAAGTCGGTCA 180
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATGCAAGTAAATATCTGATTGCAGGAGGGATTGCAGGTGCTGCATCTCGTACTGCAACTG 240
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CACCTCTTGACCGCCTTAAAGTGATCATGCAAGTACAGACTACACGAACTACAGTCATGC 300
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATTCAATTAAGGATATATGGAGCCAGGGTGGCATGTTAGCATTTTTTAGAGGGAATGGAT 360
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAATGTTGTGAAAGTTGCTCCAGAAAGCGCAATAAGATTTTATGCCTATGAAATGCTGA 420
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ---------------------------------------------------------TGA 3
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC 480
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      AAGAATATATTATGAAGAGCAAAGGAGAAAATAAGAGCGAAGTTGGTCCTTCTGAACGTC 63
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG 540
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TTGTAGCTGGTGGTTTGGCTGGTGCAGTAGCACAAACAGCAATTTATCCCGTAGATTTAG 123
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT 600
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TGAAAACACGACTGCAGACTTATTCATGTGTGGATGGTAAAGTACCTAGTCTTGGTGCAT 183
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT 660
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      TGTCAAGGGATATATTGATGCACGAGGGTCCTCGAGCATTCTATAGAGGTCTGGTTCCAT 243
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG 720
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      CTTTGCTTGGTATTGTCCCTTATGCCGGAATTGATCTTGCTGTATATGAGACATTGAAAG 303
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT 780
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ACGTATCCAAGACATATATCCTGAAGGATAGTGATCCTGGTCCTCTAGTACAACTGGGCT 363
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA 840
consensus_11808#3      -----------------------GGGGCA-CATGTGTT-ACCCTTTACAGGT-ATCAGGA 34
consensus_11808#1      GTGGGACTGTATCAGGAGCCTTGGGGGCAACATGTGTTTACCCTTTACAGGTTATCAGGA 423
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGA-TGTA 899
consensus_11808#3      CA-GACTGCA-GCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGAATGTA 92
consensus_11808#1      CAAGACTGCAAGCTCAACGAGCCAATTCAGAATCTGCATATAGAGGTATGTCTGA---TG 480
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCT--GGAGAACGCTACAGCAT-GAGGG-----TGTTTCTGGATTCTACAAAGGAATCC 951
consensus_11808#3      TTTCTGGGAGAACGCTACAGCATTGAAGGGGTGTNNNTTCTGGATTCTACAAAGGAATCC 152
consensus_11808#1      TATTCTGGAGAACGCTACAGCATGAGGGT------GTTTCTGGATTCTACAAAGGAATCC 534
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACCAAATCTTCTTAAAGTGGTGCCTGC-AGCAA-GTATTA--CCTACCTAG----TGTA 1003
consensus_11808#3      TACCAAATCTTCTTAAAGTGGTGCCTGCCAGCAAAGTATTGACCCTACCTAGGTGGTATT 212
consensus_11808#1      TACCAAATCTTCTTAAAGTGGTGCCTGC-AGCAA-GTATTA--CCTACCTAG----TGTA 586
consensus_11808#2      ---------------------------C-AGCAA-GTATTA--CCTACCTAG----TGTA 25
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 1052
consensus_11808#3      GGAAGCAAATGGAAAGAAAAAATCTCTCCCCTTGGATTGGAAATTACGGGAGGCTGGTGT 272
consensus_11808#1      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 635
consensus_11808#2      TGAAGCAAT----GAAGAAAAATCTCTCCCTT--GATTG--AATTACGGA--GCTGTT-T 74
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 1110
consensus_11808#3      GGCAAAATCGGCCATCATTTATAGACATGGCTGACTGTAGAGATAATGACGATACCATGA 332
consensus_11808#1      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 693
consensus_11808#2      GGCAAA-TCGGCCATCATTTATTGACATGGCTGACTGTAGAGATAATGACGATAC-ATGA 132
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 1168
consensus_11808#3      TNTTTACTTGGTTAAGTAGCTACTTTTTTGAGGTGCAAGACGGTGCCTCCAGGACAGAAT 392
consensus_11808#1      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 751
consensus_11808#2      TTTTA--CTGGTTAAGTAGCTACTTTTTTGAAGTGCAAGACGGTGCCTTCAGGACAGAAT 190
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 1227
consensus_11808#3      NTGAAGCTATGGTGGCATCTCTCTAAATGTTCATNTCCCCAGAAATGAAGCGATAACCAT 452
consensus_11808#1      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 810
consensus_11808#2      TTGAAGCTATGGTGGCATCTCTCTTAATTTTCATTTCCC-AGAAATGAAGCGATAACCAT 249
consensus_11808#4      ---------------GGTTTTTTTTTTTTTTTTTTTTTTAATTAA--ACAGGGTAACCAT 43
                                        * * * *   * **  * *    *  **  *   * *******

consensus_11808#0      CAGATCATTGAGACATCTTTGCTGGCGTACTGGTACAATTCCTAACTGTCATGTTATATC 1287
consensus_11808#3      CAGATCATGGAGACATCTNNGCTGGCGTAC------------------------------ 482
consensus_11808#1      CAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTG 870
consensus_11808#2      CAGATCATTGAGACATCTTTGCTGGCGTACTGTAAGGCATCGTTTGCTCCGAGTTAGCTG 309
consensus_11808#4      AAGGAAGTTATATTGGTAAAGCTGGCAAATTATTACATACAGTATGTATTGACTTTTTTG 103
                        **    *            ******  *                               

consensus_11808#0      ACAACAGTTATACTTGACATGCCCTTCTGTTCTTTATAACAACTCCTTTTTGTACATACA 1347
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      GTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCA 930
consensus_11808#2      GTCCTCGTGAATTCCTGAAGGCTTATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCA 369
consensus_11808#4      GCATGTACCCAA------------------------------------------------ 115
                                                                                   

consensus_11808#0      CAACTACTTTATGCTGCTGCACATACTTGGAAGTGAATAGTGAACAACATAGCTTATATT 1407
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      -AACTGTAAAACACAGGAAAACACTCTTTAACTTAATT------TACCATTCCTTGT--- 980
consensus_11808#2      -AACTGTAAAACACAGGAAAACACTCTTTAACTTAATT------TACCATTCCTTGT--- 419
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AGCAGCCACAGCGACTAGAGCTGATGATGTTTCTTAGGAGTTAGCTTATGTAATTATGCT 1467
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ----GCTCCTGAAATTAAAGAGGAGCTTGACCTTTA-----CTGACGACGAAATTGCCCT 1031
consensus_11808#2      ----GCTCCTGAAATTAAAGAGGAGCTTGACCTTTA-----CTGACGACGAAATTGCCCT 470
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TAATCAGCAAGCTTGAAAACTGAGCATTTTGTCCTTTTTTTCCCTTGATCCTGTGACAGA 1527
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ---GCAGAAAGGGTGCTGGTTATACA---TGCCTGTATTGCCCCTTGGCTACATGCCAAA 1085
consensus_11808#2      ---GCAGAAAGGGTGCTGGTTATACA---TGCCTGTATTGCCCCTTGGCTACATGCCAAA 524
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GAAACCCAGTGGGTACTGGAAGCTAAATGCCTAAAATTTGCTGATCCTGGTGTACAGTTT 1587
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      -AAAGTCAAGGCCTACTGTATGTAA------TAATCTGCCAGCTTTACCAATAAAAAGAC 1138
consensus_11808#2      -AAAGTCAATGCCTACTGTATGTAA------TAAAA-------------AAAAAAAAAAC 564
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AACTGTGCTCATATGGATAGTTAATACTCTATAATACTTTAGTCTTCTAGAAGTGGAACA 1647
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      CTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGACGGTA 1198
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACTGTAAGAGACAGCTATCGTATGCATAACTTTTTTTTTGTATCATAGCTGAATACACC 1707
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      AAATGCCCCTCAAATTGTAGGTGTACATGTATATATATGTGCTTAGAAGTTA-------- 1250
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGGTATCATGAATAGACTTCAAAAAAAGTGAAAGACTTGAAAAGGACTATGTTAATACT 1767
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTAGTTTATTATTTAGTTAAGCTGCAGGATATTCAGAGGTATGAGTATGGACCCAGTATA 1827
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AGTTAAATGTGTGTGCATATTAATGGCCAAAGTAAGATCGAATTTGACTGATACTAGATC 1887
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGGAATCAAATATGTTAATGGCCAAAGAACCTGAAAGGTACAGACGGAAATCCATTCCAT 1947
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACTGTTTTTGCAGCTAAATCTGCTTGCTCGTCCTCCTCCTCCGATCTTGTCTATTACATT 2007
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AATGCACACAAGAGAGCGTCTAAACATTAGGACATTTAAATTTCATTATATGTGCCAATC 2067
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ACGGAATCACCTGCCATGGAAGTGACTAAATATTTTTTTTTCCTGTTAATAATATTTGTA 2127
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TGTCCTGGAATATCAATGGGATCAGTTCTGTTTGGAAGCATGATCTCTATATGACTTTAT 2187
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      AAGGTGATGAAATGAAATGTTGTTTGCTTTGAATGAAGAAACATTATTAACTTGTGTAGA 2247
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATAGTTAGCTTGAAACGTTATGAGATTTGTGGTCTATTTTGTCTCCTTGAAAACCGTATG 2307
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATAAGTGGTACTTCTGTTCTAGATGCCCTGGTACTTCAAAATAATAGGAATAAAAACAA 2367
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAATTTAATTATCTTTTCTTTGTTATGAGCCTTGATTCCAGATTTCAGGACTTGGGAGCA 2427
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGCCGTGGCAAACTAGTACTAAGTATGCCCAGAGTTTAACGAATCTTAGTTTGTACTCA 2487
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGTCCCATACAATTCATGCAACTGATAACAAATATGCTTGTTGAAATCTGTCGAATATA 2547
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CAGCTGGCTCTTTTCATGTGTCAGGTTCTAATTGTATTATTGGAGCCAACTTCATAGCAT 2607
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACTGCAATATTGTTTGCCAATAGTTTCAATTCCACTCCAAATGAACTATGTTACCTACT 2667
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTCTCTGTCCACAAATATAAGGGGATTTTAGCTATGCACCTGGGAGCACTTGTCCATGTA 2727
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TATAGTCAAAATACCTTATATGTGGACGGAGGGCCTGATCCTTGGTGAATTATGATACTG 2787
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTCTAATTCAAGAGTTAGTTTATGAACATGATAATTTGTTCAGTTATTTAAACTTGTAAC 2847
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TCATGTTCTCACAGATCTGGACAAATTCTCTTCTTTATGACTCATTTCCTTTACTTTTGA 2907
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CATTTCAGTAAGGCATCGTTTGCTCCGAGTTAGCTGGTCCTCGTGAATTCCTGAAGGCTT 2967
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      ATTTTGCCCCTGTCCTGGGGTGAGTTTTGTTAGTCAAACTGTAAAACACAGGAAAACACT 3027
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTTAACTTAATTTACCATTCCTTGTGCTCCTGAAATTAAAGAGGAGCTTGACCTTTACT 3087
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GACGACGAAATTGCCCTGCAGAAAGGGTGCTGGTTATACATGCCTGTATTGCCCCTTGGC 3147
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TACATGCCAAAAAAGTCAATGCCTACTGTATGTAATAATCTGCCAGCTTTACCAATATAA 3207
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      CTTCCTTATGGTTACCCTGTTAAATGAATACGCAAATGACCCGGTGAGCAGTGTAAAGAC 3267
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      GGTAAAATGCCCCTCAAATTGTATGTGTACATGTATATATATGTGCTTAGAAGTTAGAAG 3327
consensus_11808#3      ------------------------------------------------------------
consensus_11808#1      ------------------------------------------------------------
consensus_11808#2      ------------------------------------------------------------
consensus_11808#4      ------------------------------------------------------------
                                                                                   

consensus_11808#0      TTGATCCCTTTCTGGACTGCTTACATGGCAGTCTT 3362
consensus_11808#3      -----------------------------------
consensus_11808#1      -----------------------------------
consensus_11808#2      -----------------------------------
consensus_11808#4      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)