These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11819#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 4202 fasta sequence [CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCACCCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCTCCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCGCCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCCTCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACGAAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGCCTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGAGGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTTGGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGGATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACATGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATATGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACTACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGAAAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTCCTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT--------GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTAAGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAAAATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAA-CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAGCTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCACCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTTGTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATATTCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTATTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTGACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTTCTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGCAGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTCTAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAGTTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAGAATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAAGGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATGCAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCGACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAATTGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATGATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAGCTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGTCTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGTTGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT-TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTTGAAAAAAAAAAGAAACTACCGTAAAAATAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK100349 [CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCACCCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCTCCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCGCCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCCTCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACGAAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGCCTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGAGGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTTGGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGGATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACATGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATATGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACTACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGAAAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTCCTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTCCCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTATCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTATGTAGGCAGGATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTAAGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAAAATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAAGCTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGGTGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAGCTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCACCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTTGTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATATTCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTATTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTGACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTTCTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGCAGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTCTAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAGTTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAGAATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAAGGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATGCAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCGACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAATTGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATGATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAGCTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGTCTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGTTGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTTGAAAAAAAAAAG ] [+] EMBL CB631723 [ TGGGAAGATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATACAA ] [+] EMBL CB632002 [ tgggccttATGAAATACTTCGGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGCTTGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTTTGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATAATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATCTCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAACAGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGTCTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTAT GATACACAATATGATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATATTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTATTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGTAAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGGGCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGAC ] [+] EMBL CB640408 [ TTGCTGAAAAA CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTCTGAAAAATGCAATATTGCTTTTCCTTGAT ] [+] EMBL CB640336 [ TTGCTGAAAAA CTTGGGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGATGGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTGGATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAATTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTTCTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCAACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGGAAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAATGGTGTCATTGTTAGGAACTATGCATGAANTTTCTCAAAG ] [-] EMBL CF306865 [ CATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTT TTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACA TTTTTTTTTGAAAAAAAAAAGAAACTACCGTAAAAATAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI806093 [ AGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC AAATGGAACATC AAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATC AAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTCCTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATAaaaaaa ] consensusID : consensus_11819#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 758 fasta sequence [GCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA] [-] EMBL CB631724 [GCGTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA] [-] EMBL CB632003 [ GTGACAAGGAATTGCACATTCGAACTGACATTTATGAGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAATTCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGATCTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCATGGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACATATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTCCAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCAATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCCAAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCTTCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTCATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAGCTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGACACATTTTTTTTTGAAAAAAAAAAAAGGGACTACCGTAAAAATATGACTCGGTAATTCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11819#0 CTCCTCCCCCTCGGCTCGCAACCGCCATGGAGCCATCGCCGGAGATTCCGCCGCCGCCAC 60 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CCGCCTTCGCCGCCGGCGGAGAAGGCGATCCGCATGCTCCCACCACAGCCGCCGCCCGCT 120 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CCTCCTCCTCCTCCTCTCTATTTCCTCTCTTCCCCCTCTCGGCGCCCGAGGAATCCTCCG 180 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CCCCCGCGGCGGGGTCCCAGTGGCTCTCAAACCCTAGCTTCTCCTTCGACGCCTCCTCCC 240 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TCAACATCCCCGCCACTGCCTCCTCATCCGTACCGCCGCCGCTAAGCGCCTCGTCGGACG 300 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AAGAGGAGGCGCCACGGCCCGCACCTGCTAAGTATGACCTGCTGCCCTACTCACCGTCGC 360 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTCCGGCCTCCGACGAGGAGAGGAGGGACAGACGGAAGGATAGGAAGAGGAGGAAGCGGA 420 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGCGGGAGAAGGAGCGGTACAATAGCGCGGAAGCCTCGCGAAAGCCGGGGGTTCGCGCTT 480 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGGCTGGGTCGGAGACGAAGTTGGCTAAGGATTACTACTTCGACGCCAAGGGCGACCAGG 540 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ATAACTTGGCGTTTGGATCGATATACAGAATGGATATTGCACGCTACAAGTCTCAAAACA 600 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGCCAGAGGCACGTGGTCTAAAACGGCTTTTGTTTCATAACTTGGGTGTCTCGGTACATA 660 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGGGTCATGAGTCAGATTTAGATGGACTGAATAGCAAAGCAAGAGCTGGAGGTCGCTACT 720 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ACTCGGCGAAATATGCAGTTGTAGAAAGAAATAAGGGTTTCAAACACCTAAAAGTATTGA 780 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AAAAGGATAACTCTGCAATTCTCCCAGAAGATTTTATCCCCCTAGGGATACCATCTCTTC 840 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTGAAAATAACACTACTGGGGAACAGGAACTTGAAGAATCTTGGGAAGATGAAATACTTC 900 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGAGGACACGAGAATTCAACAAGATGTCTCGGGAGTTACCTCACAATGAGAAAATTTGGT 960 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGGACTTTGCCCGATTCCAGGATAAAGTTGCCAGTACTCAACCTCAGAAAGCAGCCCGTT 1020 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGCAAACAACTGAAAGAAAAATTAGTATATTGGAAAAAGCTGTAGAGCTTAATCCAGATA 1080 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ATGAAGAATTATTGCTTTGTCTTCTGAAGGCATATGGTGAGAGGGATAGCACCCAGAATC 1140 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TCCTGGATAAATGGGAGCAGATACTCATGAAACACCCGGATAGTTGTAAGTTGTGGAAAC 1200 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AGTATCTACTTCTGTGTCAAGGGGAATTCTCCAGATTCAAAGTATCTGACCTACGGAAGT 1260 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTTACGCTTATGCAGTACAGGCTTTATCTGCAGCTTGTACTAAGCTATGATACACAATAT 1320 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GATCGTCTCGAACCTAAGTATTCTTCCTTAATTCATCTTGAACTCGGTCTAGTGGATATA 1380 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TTTGTGAATTTGTGTCGGTTCGAATGGCATACTGGACATCGGGAATTAGCAACTGCACTA 1440 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TTTCAGGCTCAAATAGAATTTAGTTTATTCTCCCCTCCCCTTCATCTGACCACAAGCAGT 1500 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AAGCAAAGACTCTTTGAGCACTTCTGGAACAATGGTGGTGCTAGAATCGGAGAAGATGGG 1560 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GCTCTTGGATGGTCCAGATGGTTGGCAAAAGATGAGGAGAGTAGACAAAATATAGATATA 1620 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CAAGAAAATACCCAAGAAACTGAAAGGGGTGGTTGGAATGGTTGGTTTGATCCTTCTCTA 1680 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AGGACTAATAGTGAAACAAGCAAAGTGGAACCATCGACATCTGATGGAAATGATGCAGAA 1740 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AATCCAGATGATGAGGACCCATCTGCACAAGAAGATGTTGAATCTTTGCTGAAAAACTTG 1800 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGATTGATGGAGATGCTGATTACAATAGTGAAGTTAAAGATCCAAAAACGTGGAATAGAT 1860 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGTCATTTATGGAGTTATCAAGGGATAATGAACAATGGATGCCTCTTCATGAAAAACTTG 1920 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GATCACTTTATTCTGATGATGCTCCAACTGGAGAAGACAATGATCAGCTTTCCAGAGTAA 1980 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TTTTGTTTGAGGATATAACTGAGTTCCTGTTCTCTCTATCTTCTGAAGAGGCTCGCTTTT 2040 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTTTGATATGCCAATTCATTGATTTCTATGGTGGAAAAATTTCTAGATGGACATCCACCA 2100 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ACAGTTCAAGTTGGATTGATAGGAATTTGAGCCTAGAGATGATTACAGATGACATTCAGG 2160 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AAGATCTTAGTACGGTGTCTAACCTTATAGACAAGAACCAAACTTCAGTTCATAATAAAA 2220 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGGTGTCATTGTTAGGAACTATGCATGAATTTTCTCAAAGGCCTGGCACTGCGAAATTTC 2280 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGAAAAATGCAATATTGCTTTTCCTTGATGTATTCCCTCGTAATCATATCCTGGAGGAAG 2340 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTGTTCTTGTTACCCCCCAAATTCATACAGCTCAAGAAAAATATCTGGCTACTCCAGCCA 2400 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CCGCATCCCGGGCTTTGGCCAAAAATCTATTGAAGAAAGACAGACAGGATCTTTTGCTTT 2460 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GTGGAATATATGGACGAATTGAGGCTATGAATGGGGACTTTGTCAAAGCAAGGCATATAT 2520 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TCGACTTGGCACTATCAACTTCTCAAGGAGCTTCAGAGGATCTCAGGAAGAAGGTTCCTA 2580 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TTCTTTATTTTTGGTATGCTGAGATGGAGCTAGCAATATATGCTTCAAGAAACAATTCTG 2640 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ACTCTGTGGATCGTGCAATCCACGTTCTGTCCTGCTTAGGGGACAAGGCGAAGTATGCTT 2700 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTTTTGATGGGTCTATATCACGACCTCAGGTGTTAAAGGCTCGTCAAGGATTTAAAGAGC 2760 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AGATTAGAAGCTTGCGATCTTCATTTGCAAGTGATGGTATGAAAGAAGAGTCTGTTGCTC 2820 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TAATCTGCTCAGCATCTTTGTTTGAGAGTATGACATCTGGTTTTGCTTCTGGTCTTGAAG 2880 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TTATAGAAGAGACCTTTTATATGACACCTTCAGAGAACAACCATAGCTTAGAATTCGAAG 2940 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 AATTGTGGATGCACTACATCAAGCAGCTTCAGAAAAATCTTAATCAGTTGAGTCTCTCAA 3000 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 GGGTTTGGCCAAAAATATCGCAAGGAATACAAACATATCCGTACAACCCAAAATCATATG 3060 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CAGCCATGTTAACTCTAGGTTGCCTTTACAGTGTTTCCAATAATCTACGTCTCACACTCG 3120 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ACAAATTTAATCAAAGGGATCCTTCCATAATTGGCTTGCTCTTTGCTTTGTCCTTTGAAT 3180 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGTGCAAAGCTGGATCAGACAATAGAATACACAATCTGTTTGAGAGAGCTCTGACTGATG 3240 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 ATAAGTTACAGAAATCCGTTCTGTTGTGGCGCTGTTATCTAGCTTATGAGGCAGAGATAG 3300 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTTGCAATGCTTCTGCAGCTCGGCGTGTGTTCTTCAGAGCTATACATGCCTGTCCATGGT 3360 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 CTAAACGATTATGGCTTGATGGATTTGAAAAACTGAGTTCAATTTTGACACTGAAAGAGT 3420 consensus_11819#1 ------------------------------------------------------------ consensus_11819#0 TGTCAGATCTCCAAGAAGTAATGCGTGACAAGGAATTGCACATTCGAACTGACATTTATG 3480 consensus_11819#1 ----------------------GCGTGACAAGGAATTGCACATTCGAACTGACATTTATG 38 ************************************** consensus_11819#0 AGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAAT 3540 consensus_11819#1 AGATACTCCTGCAAGATGAAACAGATACGTGATGCAGCTATCCCTGTTTTTGTCCATAAT 98 ************************************************************ consensus_11819#0 TCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGAT 3600 consensus_11819#1 TCGAGATCTCCATATTATCTCAAGGTTCCATCTTGCAACTGAAGATCGGTTGCATGTGAT 158 ************************************************************ consensus_11819#0 CTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCAT 3660 consensus_11819#1 CTTTTAACTCATAATTGTTGGACTCTCAAGATCGGTTGCTCAGGAACCTTTATGTCGCAT 218 ************************************************************ consensus_11819#0 GGAATGTGATCTGGACACGATGTACATCCAAAGCATCTTTAGATTGGCAATCTCGTGACA 3720 consensus_11819#1 GGAATGTGATCTGGACACGATGTATATCCAAAGCATCTTTAGATTGGCAATCTCGTGACA 278 ************************ *********************************** consensus_11819#0 TATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTC 3780 consensus_11819#1 TATTAATGTGATTTATTTTCTGTTCCTGGAGACATATGTTCGGCTTGTGTCTGGTCACTC 338 ************************************************************ consensus_11819#0 CAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCA 3840 consensus_11819#1 CAATCCTTGTATTTGGTTGGCTCATGCTTCTTGGAAGGGCACAACTGCAGGAAGAGGTCA 398 ************************************************************ consensus_11819#0 ATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC 3900 consensus_11819#1 ATATGAAGTAATGATGGAGGAAAGCATAGAGCGGCAGCATAAAGTTGAAATTGTCTTGCC 458 ************************************************************ consensus_11819#0 AAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAAAATTACTGCGTCT 3960 consensus_11819#1 AAAATGGAACATCAAAAGCTGGCAGAGAATCGAGTTGATAAATAAAATATTACTGCGTCT 518 *********************************************** ************ consensus_11819#0 TCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTC 4020 consensus_11819#1 TCAGGTTGGGGGTATTTATGCAGTACCCTAGCGTCAATCAAAAGCCTGGAGTATGTCTTC 578 ************************************************************ consensus_11819#0 ATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAG 4080 consensus_11819#1 ATTTATCATCTTTCTGCGATTAAACGATGCTTGTCCTTTTTAAAACGGAAAGAAGGAAAG 638 ************************************************************ consensus_11819#0 CTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGA 4140 consensus_11819#1 CTTAGTTCTGAACATAATATACTAATATTGTGGTATATATGTGTACAATGCTTGAAGTGA 698 ************************************************************ consensus_11819#0 CACATTTTTTTTTTGAAAAAAAAAA-GAAACTACCGTAAAAATAAAAAAAAAAAAAAAAA 4199 consensus_11819#1 CACATTTTTTTTTGAAAAAAAAAAAAGAAACTCCCGTAAAAATATGACTCGGTAATTACA 758 ************* ********** ****** *********** * ** * * consensus_11819#0 AAA 4202 consensus_11819#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||