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Oryza sativa
cluster # 11822 cluster # 11822       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11822#0 length = 1204 sequences # 3  
consensus_11822#1 length = 800 sequences # 1  
consensus_11822#2 length = 783 sequences # 5  

consensusID : consensus_11822#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1204
fasta sequence
                              [AGAGAGAGGAGCAGCCGAGTCGGCCATGGCGCGGTCGCCGGCGG-NAG-GAAGCCCTCGGCGGCGCAGACCGTCGCGGTNACGCTGGCGCTGGCGCTCGCNTCCGCGGGGCTCCTNTTCNTCCTTTTCCACCTCTCCCCGTCCAGCCCCACCCCGNACCCGCACCCGCACCGCCGCCTCCGCCTCCGCGGCGCGCGCGCCTCCCCCTCCCCGCGCGGCCAGATCCCGTTCGACCCCGTCATCGCGGGCCTCGAGCGCCGCCGCGACGACCGCGAGTGGGAGCGCCTCGCCGCCGCGGGGCTGCACGCGCCGGGGTTCGAGGCGGCGCCCGTCCCCGAGGACTACATCGACGGCGGCGGCGGCTTCGGCGCCGACCCCGACGAGGACTACATCAACGACGCCGCGCGGTTCAACCTGACGCGGCGGGTGGAGGCGCTGTTCCCCAAGATCGACGTCGACCCCGCCGACGGCGCCGTGACGCCCGCCGAGCTGACCGCCTGGAACCTCGCTTCCGCGCGCCGCGAGGTGATGCACCGCACCGCCAGGGAGCTCGACCTGCACGACCGCGACCACGACGGTCGCATCGCCTTCTCCGAGTACTAGCGCCCCATCTGGGCATGGCGGTTCGATGATCATAACTCATCCAATGATGGGGTGGGATGGTGGAAGGAGGAGCACTTTAATGCTTCGGATATGGACGGTGATGGCTTCCTAAATCTGATAGAGTTTAACGACTTCTTACATCCAGCCGATACTACAAACCCAAAGCTAATAAATTGGTTGTGCAAAGAAGAAGTCAGGTGCATCTTTCCCTCCAAACATTATTTCCTTACACATCTGCAAGTTCATATTCCATTTGTATCCTCCTCTTATTATAATTCAGTTCCGCACAAACAAAATGGAGATGAAAGATATATTTTTTTCTTGCTGAACTTAGAGAGTTAGAAACTACAAAAAAGAACAATTATGAAACTCTAGAACATATTCTTAGGTTATTACTTGCTGAAACAATGCCCTTGATGGAGTGATGCTACATTCTGGCTTGTGCATCACTATGTTGTGCAATGGTTATAATTGGAGCATTTCTTACTTTTCTTACTTCAGGTTGGTGATAGTACTGGGTATTCTTTAGAGTCTAGGTACTCTGTTAGTTGACTGTGTGAAACGGCTGCATGCATAAATGCTATTCATTGCTTGNTAGTTTTCA]

[+] EMBL OSC104253            [AGAGAGAGGAGCAGCCGAGTCGGCCATGGCGCGGTCGCCGGCGG NAGTGAAGCCCTCGGCGGCGCAGACCGTCGCGGTNACGCTGGCGCTGGCGCTCGCNTCCGCGGGGCTCCTNTTCNTCCTTTTCCACCTCTCCCCGTCCAGCCCCACCCCGNAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB666713             [                 AGTCGGCCATGGCGCGGTCGCCGGCGGCGAG GAAGCCCTCGGCGGCGCAGACCGTCGCGGTGACGCTGGCGCTGGCGCTCGCCTCCGCGGGGCTCCTCTTCCTCCTGTTCCACCTCTCCCCGTCCAGCCCCACCCCGCACCCGCACCCGCACCGCCGCCTCCGCCTCCGCGGCGCGCGCGCCTCCCCCTCCCCGCGCGGCCAGATCCCGTTCGACCCCGTCATCGCGGGCCTCGAGCGCCGCCGCGACGACCGCGAGTGGGAGCGCCTCGCCGCCGCGGGGCTGCACGCGCCGGGGTTCGAGGCGGCGCCCGTCCCCGAGGACTACATCGACGGCGGCGGCGGCTTCGGCGCCGACCCCGACGAGGACTACATCAACGACGCCGCGCGGTTCAACCTGACGCGGCGGGTGGAGGCGCTGTTCCCCAAGATCGACGTCGACCCCGCCGACGGCGCCGTGACGCCCGCCGAGCTGACCGCCTGGAACCTCGCTTCCGCGCGCCGCGAGGTGATGCACCGCACCGCCAGGGAGCTCGACCTGCACGACCGCGACCACGACGGTCGCATCGCCTTCTCCGAGTACTAGCGCCCCATCTGGGCATGGCGGTTCGATGATCATAACTCATCCAATGATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB619180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCCCCAAGATCGACGTCGACCCCGCCGACGGCGCCGTGACGCCCGCCGAGCTGACCGCCTGGAACCTCGCCTCCGCGCGCCGCGAGGTGATGCACCGCACCGCCAGGGAGCTCGACCTGCACGACCGCGACCACGACGGTCGCATCGCCTTCTCCGAGTACGAGCGCCCCAGCTGGGCATGGCGGTTCGATGATCATAACTCATCCAATGATGGGGTGGGATGGTGGAAGGAGGAGCACTTTAATGCTTCGGATATGGACGGTGATGGCTTCCTAAATCTGATAGAGTTTAACGACTTCTTACATCCAGCCGATACTACAAACCCAAAGCTAATAAATTGGTTGTGCAAAGAAGAAGTCAGGTGCATCTTTCCCTCCAAACATTATTTCCTTACACATCTGCAAGTTCATATTCCATTTGTATCCTCCTCTTATTATAATTCAGTTCCGCACAAACAAAATGGAGATGAAAGATATATTTTTTTCTTGCTGAACTTAGAGAGTTAGAAACTACAAAAAAGAACAATTATGAAACTCTAGAACATATTCTTAGGTTATTACTTGCTGAAACAATGCCCTTGATGGAGTGATGCTACATTCTGGCTTGTGCATCACTATGTTGTGCAATGGTTATAATTGGAGCATTTCTTACTTTTCTTACTTCAGGTTGGTGATAGTACTGGGTATTCTTTAGAGTCTAGGTACTCTGTTAGTTGACTGTGTGAAACGGCTGCATGCATAAATGCTATTCATTGCTTGNTAGTTTTCA]


>consensus_11822#0 AGAGAGAGGAGCAGCCGAGTCGGCCATGGCGCGGTCGCCGGCGGNAGGAAGCCCTCGGCG GCGCAGACCGTCGCGGTNACGCTGGCGCTGGCGCTCGCNTCCGCGGGGCTCCTNTTCNTC CTTTTCCACCTCTCCCCGTCCAGCCCCACCCCGNACCCGCACCCGCACCGCCGCCTCCGC CTCCGCGGCGCGCGCGCCTCCCCCTCCCCGCGCGGCCAGATCCCGTTCGACCCCGTCATC GCGGGCCTCGAGCGCCGCCGCGACGACCGCGAGTGGGAGCGCCTCGCCGCCGCGGGGCTG CACGCGCCGGGGTTCGAGGCGGCGCCCGTCCCCGAGGACTACATCGACGGCGGCGGCGGC TTCGGCGCCGACCCCGACGAGGACTACATCAACGACGCCGCGCGGTTCAACCTGACGCGG CGGGTGGAGGCGCTGTTCCCCAAGATCGACGTCGACCCCGCCGACGGCGCCGTGACGCCC GCCGAGCTGACCGCCTGGAACCTCGCTTCCGCGCGCCGCGAGGTGATGCACCGCACCGCC AGGGAGCTCGACCTGCACGACCGCGACCACGACGGTCGCATCGCCTTCTCCGAGTACTAG CGCCCCATCTGGGCATGGCGGTTCGATGATCATAACTCATCCAATGATGGGGTGGGATGG TGGAAGGAGGAGCACTTTAATGCTTCGGATATGGACGGTGATGGCTTCCTAAATCTGATA GAGTTTAACGACTTCTTACATCCAGCCGATACTACAAACCCAAAGCTAATAAATTGGTTG TGCAAAGAAGAAGTCAGGTGCATCTTTCCCTCCAAACATTATTTCCTTACACATCTGCAA GTTCATATTCCATTTGTATCCTCCTCTTATTATAATTCAGTTCCGCACAAACAAAATGGA GATGAAAGATATATTTTTTTCTTGCTGAACTTAGAGAGTTAGAAACTACAAAAAAGAACA ATTATGAAACTCTAGAACATATTCTTAGGTTATTACTTGCTGAAACAATGCCCTTGATGG AGTGATGCTACATTCTGGCTTGTGCATCACTATGTTGTGCAATGGTTATAATTGGAGCAT TTCTTACTTTTCTTACTTCAGGTTGGTGATAGTACTGGGTATTCTTTAGAGTCTAGGTAC TCTGTTAGTTGACTGTGTGAAACGGCTGCATGCATAAATGCTATTCATTGCTTGNTAGTT TTCA



consensusID : consensus_11822#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 800
fasta sequence
                              [GAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGTGTAGTTTTACAAGTGTGTGATCCAAAAATATAGTTCTACTTTGCAATAATAAAAAAAATAAAAGAACCAATGCTACCTCATCATACATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTACAAAAGAACGCCCTACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCTGCCAAAAAAAGCGAGATTGGTGAGACAAATGTGTTCTAGACTAAAGCAAAGGAAAAAATGAATAACAGATAGAACAGCTCAAATTATATACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAACTACCGAAGCTCATCATGAAACCCATAATCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTTGCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGTGGAGATTTCCAATAATAGGTTTTAGCTCATCTGCTGACAAAAGCCCATCATTATCCAGATCAAGATGTGTAAATGATTTTCTTGCGGGTGCATCAGAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAATGCCCGAATTGAGTAAAATAATCCATTATAAAACTCTTGAAAATTGAGTTTTCCATCA]

[+] EMBL CB619181             [GAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGTGTAGTTTTACAAGTGTGTGATCCAAAAATATAGTTCTACTTTGCAATAATAAAAAAAATAAAAGAACCAATGCTACCTCATCATACATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTACAAAAGAACGCCCTACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCTGCCAAAAAAAGCGAGATTGGTGAGACAAATGTGTTCTAGACTAAAGCAAAGGAAAAAATGAATAACAGATAGAACAGCTCAAATTATATACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAACTACCGAAGCTCATCATGAAACCCATAATCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTTGCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGTGGAGATTTCCAATAATAGGTTTTAGCTCATCTGCTGACAAAAGCCCATCATTATCCAGATCAAGATGTGTAAATGATTTTCTTGCGGGTGCATCAGAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAATGCCCGAATTGAGTAAAATAATCCATTATAAAACTCTTGAAAATTGAGTTTTCCATCA]


>consensus_11822#1 GAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGTGTAGTTTTACAAGTGTGTG ATCCAAAAATATAGTTCTACTTTGCAATAATAAAAAAAATAAAAGAACCAATGCTACCTC ATCATACATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTACAAAAGAACGCCCTACTT ATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCTGCCAAAAAAAGC GAGATTGGTGAGACAAATGTGTTCTAGACTAAAGCAAAGGAAAAAATGAATAACAGATAG AACAGCTCAAATTATATACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATG ATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTG AGTACCTCCATCCAGGAACTACCGAAGCTCATCATGAAACCCATAATCATCTTCTGTGAA TAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTTGCAAACTCAGTTGCCCATC TTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTC TGGTGGGTGGAGATTTCCAATAATAGGTTTTAGCTCATCTGCTGACAAAAGCCCATCATT ATCCAGATCAAGATGTGTAAATGATTTTCTTGCGGGTGCATCAGAAGCATTGGAGTCATC TGTTGAAGCCTCCTCATCAAAATGCCCGAATTGAGTAAAATAATCCATTATAAAACTCTT GAAAATTGAGTTTTCCATCA



consensusID : consensus_11822#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 783
fasta sequence
                              [TTTTTTTTCAAGAAAGC-TGATATGCAGCCTATGGTTGCACTTCTCTT-GTTGTATAGTTTTACAA--GTGTGATCCAAAAATATGGTTCTACTTTGCAATAAT--AAAAAAATAAAAGAACCAATGCTACCTCATCATACA-TATGAAGAAAATAA-ATCAAGAAAGGT--TAAGGTTACAAAAGAACGCCC-T-ACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAATTACCGAAGCTCATCA-TGAAACCCA-TAA-TCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTT-GCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGT-GGAGATTTCCAATAATAGGTTTTAGCTC-ATCT-GC-TGAC-AAAAG-CCCATCA-TTATCCAGATCAAGGATGGGGTAAATGATTTTCTTGCGGGTGGCATCAAAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAAATCCGAATTGAGTAAAATAATCCATTATAGAACTCTTGAAAATTGAGTTTTCCATCATTATCTTTATCTCTTTCCCTGACTTCTTCTTTGCACAACCAATTTATTAGCTTTGGGTTCGTAGTA]

[-] EMBL BM421935             [TTTTTTTTCCAGAAAGCGTGATATGCAGGCGAGGGTTGCACTTCTCTTGGTTGTATAGTTTTACAA  GTGTGATCCAAAAATATGGTTCTACTTTGCAATAAT  AAAAAAATAAAAGAACCAATG TACCTCATCATACATTATGAAGAAAATAACATCAAGAAAGGTCNCAAGGTTACAAAAGAACGCCCGTGACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAATTACCGAAGCTCATCA TGAAACCCA TAA TCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTTGGCAAACTCAGTTGCCCATCTTTG TTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGT GGAGATTTCCAATAGTAGG TTTAGCTCAATCTGGCGTGACAAAAAGCCCCATCATTTATCCA                                                                                                                                                                                                           ]
[-] EMBL BQ906371             [TTTTTTTTCAAGAAAGC TGATATGCAGCCTATGGTTGCACTTCTCTT GTTGTATAGTTTTACAA  GTGTGATCCAAAAATATGGTTCTACTTTGCAATAAT  AAAAAAATAAAAGAACCAATGCTACCTCATCATACA TATGAAGAAAATAA ATCAAGAAAGGT  AAAGGTTACAAAAGAACGCCC T ACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAATTACCGAAGCTCATCAGTGAAACCCAGTAAGTCATCTT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL AU091507             [   TTTTTCAAGAAAGC TGATATGCAGCCTATGGTTGCACTTCTCTT GTTGTGTAGTTTTACAAGTGTGTGATCCAAAAATATAGTTCTACTTTGCAATAATAAAAAAAAATAAAAGAACCAATGCTACCTCATCATACA TATGAAGAAAATAA ATCAAGAAAGGT  TAAGGTTACAAAAGAACGCCC T ACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTNCATCCAGGAACTACCGAAGCTCATCA TGAAACCCA TAA TCATCTTCTGNGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTT GCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGTGGGAGATTTCCAATAATAGGTTTTAGCTC ATCT GC TGAC AAAAG CCCATCA TTATCCAGATCAAGGATGGGGTAAATGATTTTCTTGCGGGTGGCATCAAAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAAAT                                                                                                                         ]
[+] EMBL CB666714             [            AAAGC TGATATGCAGCCTATGGTTGCACTTCTCTT GTTGTGTAGTTTTACAAGTGTGTGATCCAAAAATATAGTTCTACTTTGCAATAATAAAAAAAAATAAAAGAACCAATGCTACCTCATCATACA TATGAAGAAAATAA ATCAAGAAAGGT  TAAGGTTACAAAAGAACGCCC T ACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGAATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGATGTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAACTACCGAAGCTCATCA TGAAACCCA TAA TCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTT GCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGT GGAGATTTCCAATAATAGGTTTTAGCTC ATCT GC TGAC AAAAG CCCATCA TTATCCAGATCAA GAT GTGTAAATGATTTTCTTGCGGGT GCATCAGAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAATGCCGAATTGAGTAAAATAATCCATTATAGAACTCTTGAAAATTGAGTTTTCCATCATTATCTTTATCTCTTTCCCTGACTTCTTCTTTGCACAACCAATTTATTAGCTTTGGGTTCGTAGTA]
[-] EMBL CA999881             [                                                                                                                                                                                                                                                                                                                                                                                                 AACCCA TAA TCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGGTTCTCAATCATCTCTT GCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGT GGAGATTTCCAATAATAGGTTTTAGCTC ATCT GC TGAC AAAAG CCCATCA TTAT                                                                                                                                                                                                              ]


>consensus_11822#2 TTTTTTTTCAAGAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGTATAGTTTT ACAAGTGTGATCCAAAAATATGGTTCTACTTTGCAATAATAAAAAAATAAAAGAACCAAT GCTACCTCATCATACATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTACAAAAGAACG CCCTACTTATAGAACTGTGTACATGAAACACGCTCGTGTTATACATGGAATCACCCTCGA ATGTTCTTGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTTATCTATTCACATCGAT GTCTAATGAAGTGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCCAGGAATTACCGA AGCTCATCATGAAACCCATAATCATCTTCTGTGAATAAAGCACTGTAGAATACATATGGG TTCTCAATCATCTCTTGCAAACTCAGTTGCCCATCTTTGTTTGTGTCAGCCTGTGTTATC ACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCTGGTGGGTGGAGATTTCCAATAATA GGTTTTAGCTCATCTGCTGACAAAAGCCCATCATTATCCAGATCAAGGATGGGGTAAATG ATTTTCTTGCGGGTGGCATCAAAAGCATTGGAGTCATCTGTTGAAGCCTCCTCATCAAAA ATCCGAATTGAGTAAAATAATCCATTATAGAACTCTTGAAAATTGAGTTTTCCATCATTA TCTTTATCTCTTTCCCTGACTTCTTCTTTGCACAACCAATTTATTAGCTTTGGGTTCGTA GTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11822#1      ------------------------------------------------------------
consensus_11822#2      ------------------------------------------------------------
consensus_11822#0      AGAGAGAGGAGCAGCCGAGTCGGCCATGGCGCGGTCGCCGGCGGNAGGAAGCCCTCGGCG 60
                                                                                   

consensus_11822#1      ------------------------------------------------------------
consensus_11822#2      ------------------------------------------------------------
consensus_11822#0      GCGCAGACCGTCGCGGTNACGCTGGCGCTGGCGCTCGCNTCCGCGGGGCTCCTNTTCNTC 120
                                                                                   

consensus_11822#1      ------------------------------------------------------------
consensus_11822#2      ------------------------------------------------------------
consensus_11822#0      CTTTTCCACCTCTCCCCGTCCAGCCCCACCCCGNACCCGCACCCGCACCGCCGCCTCCGC 180
                                                                                   

consensus_11822#1      ------------------------------------------------------------
consensus_11822#2      ----------------------------------------------------------TT 2
consensus_11822#0      CTCCGCGGCGCGCGCGCCTCCCCCTCCCCGCGCGGCCAGATCCCGTTCGACCCCGTCATC 240
                                                                                   

consensus_11822#1      ---------GAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGT-GTAGTTTTA 50
consensus_11822#2      TTTTTTCAAGAAAGCTGATATGCAGCCTATGGTTGCACTTCTCTTGTTGT-ATAGTTTTA 61
consensus_11822#0      GCGGGCCTCGAGCGCCGCCGCGACGACCGCGAGTGGGAGCGCCTCGCCGCCGCGGGGCTG 300
                                **  ** *    *  * *   *  **       ** *  *     *   * 

consensus_11822#1      CAAGTGTGTGATCCAAAAATATAGTTCTACTTTG----CAATAATAAAAAAAATAAAAGA 106
consensus_11822#2      CAAGTGTG--ATCCAAAAATATGGTTCTACTTTG----CAATAATAAAAAAA-TAAAAGA 114
consensus_11822#0      CACGCGCCGGGGTTCGAGGCGGCGCCCGTCCCCGAGGACTACATCGACGGCGGCGGCGGC 360
                       ** * *          *      *  *  *   *    * * *   *           * 

consensus_11822#1      ACCAATGCT-ACCTCATCATA---CATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTA 162
consensus_11822#2      ACCAATGCT-ACCTCATCATA---CATATGAAGAAAATAAATCAAGAAAGGTTAAGGTTA 170
consensus_11822#0      TTCGGCGCCGACCCCGACGAGGACTACATCAACGACGCCGCGCGGTTCAACCTGACGCGG 420
                         *   **  *** *  *       * ** **  *       *     *   * * *   

consensus_11822#1      CAAAAGAACGCCCTACTTAT--AGAACTGTGTACATGAAACACGC----TCGTGTTATAC 216
consensus_11822#2      CAAAAGAACGCCCTACTTAT--AGAACTGTGTACATGAAACACGC----TCGTGTTATAC 224
consensus_11822#0      CGGGTGGAGGCGCTGTTCCCCAAGATCGACGTCGACCCCGCCGACGGCGCCGTGACGCCC 480
                       *    * * ** **  *     *** *   **  *     *   *     ****     *

consensus_11822#1      ATGGAATCACCTGCCAAAAAAAGCGAGATTGGTGAGACAAATGTGTTCTAGACTAAAGCA 276
consensus_11822#2      ATGGAATCACC------------------------------------------------- 235
consensus_11822#0      GCCGAGCTGACCGCCTGGAACCTCGCTTCCGCGCGCCGCGAGGTGATGCACCGCACCGCC 540
                          **     *                                                 

consensus_11822#1      AAGGAAAAAATGAATAACAGATAGAACAGCTCAAATTATATACCCT----CGAATGTTCT 332
consensus_11822#2      --------------------------------------------CT----CGAATGTTCT 247
consensus_11822#0      AGGGAGCTCGACCTGCACGACCGCGACCACGACGGTCGCATCGCCTTCTCCGAGTACTAG 600
                                                                   **    *** *  *  

consensus_11822#1      TGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTT-ATCTATTCACATCGATGTCTAA 391
consensus_11822#2      TGCAGCCCATAGGTGAAACCTACAGATGATGGGAGTT-ATCTATTCACATCGATGTCTAA 306
consensus_11822#0      CGCCCCATCTGGGCATGGCGGTTCGATGATCATAACTCATCCAATGATGGGGTGGGATGG 660
                        **  *   * **     *     ******   *  * *** * * *    *  *  *  

consensus_11822#1      TGAAG---------------TGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCC--- 433
consensus_11822#2      TGAAG---------------TGTTCCATAGGTGGGTGATTCCTGAGTACCTCCATCC--- 348
consensus_11822#0      TGGAAGGAGGAGCACTTTAATGCTTCGGATATGGACGGTGA-TGGCTTCCTAAATCTGAT 719
                       ** *                ** * *  *  ***  * *   **  * ***  ***    

consensus_11822#1      AGGAACTACCGAAGCTCATCATGAAACCCATAATC---ATCTTCTGTGAATAAAGCA-CT 489
consensus_11822#2      AGGAATTACCGAAGCTCATCATGAAACCCATAATC---ATCTTCTGTGAATAAAGCA-CT 404
consensus_11822#0      AGAGTTTAACGACTTCTTACATCCAGCCGATACTACAAACCCAAAGCTAATAAATTGGTT 779
                       **    ** ***       ***  * ** *** *    * *    *  ******     *

consensus_11822#1      GTAGAATACATATGGGTTCTCAATCATCTCTTGCAAACTCAGTTGCC-----CATCTTT- 543
consensus_11822#2      GTAGAATACATATGGGTTCTCAATCATCTCTTGCAAACTCAGTTGCC-----CATCTTT- 458
consensus_11822#0      GTGCAAAGAAGAAGTCAGGTGCATCTTTCCCTCCAAACATTATTTCCTTACACATCTGCA 839
                       **  **   * * *     *  *** *  * * *****    ** **     *****   

consensus_11822#1      -GTTTGTGT-CAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCT 601
consensus_11822#2      -GTTTGTGT-CAGCCTGTGTTATCACATAGTCAGCTTGTTGCTTGGCATAGAAGTGTTCT 516
consensus_11822#0      AGTTCATATTCCATTTGTATCCTCCTCTTATTATAATTCAGTTCCGCACAAACAAAATGG 899
                        ***  * * *    *** *  **   *  * *   *   * *  *** * *     *  

consensus_11822#1      GGTGGGTGGAGAT---TTCCAATAATAGGTTTTAGCTCATCTGCTG--ACAAAAGCCCAT 656
consensus_11822#2      GGTGGGTGGAGAT---TTCCAATAATAGGTTTTAGCTCATCTGCTG--ACAAAAGCCCAT 571
consensus_11822#0      AGATGAAAGATATATTTTTTTCTTGCTGAACTTAGAGAGTTAGAAACTACAAAAAAGAAC 959
                        *  *   ** **   **    *    *   ****    *  *     ******    * 

consensus_11822#1      CATTATCCAGATCAAGA--TGTGTAAATGATTTT--CTTGCGGGTG-CATCAGAAGCATT 711
consensus_11822#2      CATTATCCAGATCAAGGATGGGGTAAATGATTTT--CTTGCGGGTGGCATCAAAAGCATT 629
consensus_11822#0      AATTATGAAACTCTAGAACATATTCTTAGGTTATTACTTGCTGAAA-CAATGCCCTTGAT 1018
                        *****  *  ** **       *    * ** *  ***** *    **          *

consensus_11822#1      GGAGTCATCT---GTTGAAGCCTCCTCATCAAAATGCC-CGAATTGAGTAAAATAATCCA 767
consensus_11822#2      GGAGTCATCT---GTTGAAGCCTCCTCATCAAAA-ATC-CGAATTGAGTAAAATAATCCA 684
consensus_11822#0      GGAGTGATGCTACATTCTGGCTTGTGCATCACTATGTTGTGCAATGGTTATAATTGGAGC 1078
                       ***** **      **   ** *   *****  *      * * **  ** ***      

consensus_11822#1      TTATAAAACTCTTGAAAATTGAGTTTTCCATCA--------------------------- 800
consensus_11822#2      TTATAGAACTCTTGAAAATTGAGTTTTCCATCATTATCTTTATCTCTTTCCCTGACTTCT 744
consensus_11822#0      ATTTCTTACTTTTCTTACTTCAGGTTGGTGATAGTACTGGGTATTCTTTAGAGTCTAGGT 1138
                        * *   *** **   * ** ** **      *                           

consensus_11822#1      ------------------------------------------------------------
consensus_11822#2      TCTTTGCACAACCAATTTATTAGCTTTGGGTTCGTAGTA--------------------- 783
consensus_11822#0      ACTCTGTTAGTTGACTGTGTGAAACGGCTGCATGCATAAATGCTATTCATTGCTTGNTAG 1198
                                                                                   

consensus_11822#1      ------
consensus_11822#2      ------
consensus_11822#0      TTTTCA 1204
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)