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Oryza sativa
cluster # 11826 cluster # 11826       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11826#0 length = 1243 sequences # 3  
consensus_11826#1 length = 1127 sequences # 4  
consensus_11826#2 length = 661 sequences # 2  

consensusID : consensus_11826#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1243
fasta sequence
                              [CCACCACAGGCTGACGCCCGCGCCGGCCACAGCTAGCGCGTACGCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTCCGATCGATCGACGAACCGAGGCACCAGCAGCACGGAGCTAGGAGGGTAGCGATCGAGACATGGGGAAGCATGGCAAGTGCGACGTGGAGGCGTGCTACCCGGGCGGGGCGCCGGGCGGCGGGATGTACCCGTACATGATCGAGAACGCGCAGCTCCGGTGGGCGTTCATCCGCAAGGTGTACGTGATCGTGTCGGTGCAGCTGCTGGTGACCGTCGCCGTCGCCGGCGCGGTGAACCTCGTCGAGCCCATCAAGACCTTCTTCCAGGCTCGCACGCCGGAGGTCCTCGTCGCCTACGTCATCATCATCATCTCCCCCCTCATCATGATGCTGCCGATGATCTACTTCCGTAACAAGCATCCGATCAACCTCTTCTTCCTCCTCCTCTTCACCGTCTGTATTAGCTTCTCCGTCGGCCTGGGTTGCCTCTCCAAGAATGGGACAGTGATATTTCAGGCGGCGGGAATGACGGCGGCGATAGTGATCGGACTGACCTGCTACACGTTCTGGGCCGCCAAGAGAGGCTACGACTTCGAGTTCCTCGGCCCATTCCTCTTCGCTGCCACGCTCGTCCTCTTCCTCTACGCCATAAT-CACGATC-TTTTTGCCGATGGGGAGAACGGGGAAGTTGGTGTACGGGTGCGTGGCGGCGCTGATCTTCTCCGGGTTCATTATCTACGACACCGACAACCTCATCAAGCGATACACCTACGACGAGTACGTGACCGCCGCCATCACGCTCTACCTCGACATCATCAACCTCTTCATGGCCCTCGTCACGGCGCTCCAGGCCGCCGATGGGTAGTAGAACAAGTTTGCCAACCACATTGGGCTGCAGGATGAAGCTGGATCGAAATGTGATTTCTAGTACTTTTTTTTAAACACAAGACAGTGTATGTAAAGATAGGGTTAAACAACTCCTTTGTGATTGGGCATTAACAAGCAAGCATTGCCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCGAATGACCACAAGTTTGGTTCCCAGTTAACTAAGACAGGCAAACAAACACAAGCTAAACATATGCAACAGTTGCTGTGACGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTAAAAAAAAAAA]

[+] EMBL AK107547             [CCACCACAGGCTGACGCCCGCGCCGGCCACAGCTAGCGCGTACGCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTCCGATCGATCGACGAACCGAGGCACCAGCAGCACGGAGCTAGGAGGGTAGCGATCGAGACATGGGGAAGCATGGCAAGTGCGACGTGGAGGCGTGCTACCCGGGCGGGGCGCCGGGCGGCGGGATGTACCCGTACATGATCGAGAACGCGCAGCTCCGGTGGGCGTTCATCCGCAAGGTGTACGTGATCGTGTCGGTGCAGCTGCTGGTGACCGTCGCCGTCGCCGGCGCGGTGAACCTCGTCGAGCCCATCAAGACCTTCTTCCAGGCTCGCACGCCGGAGGTCCTCGTCGCCTACGTCATCATCATCATCTCCCCCCTCATCATGATGCTGCCGATGATCTACTTCCGTAACAAGCATCCGATCAACCTCTTCTTCCTCCTCCTCTTCACCGTCTGTATTAGCTTCTCCGTCGGCCTGGGTTGCCTCTCCAAGAATGGGACAGTGATATTTCAGGCGGCGGGAATGACGGCGGCGATAGTGATCGGACTGACCTGCTACACGTTCTGGGCCGCCAAGAGAGGCTACGACTTCGAGTTCCTCGGCCCATTCCTCTTCGCTGCCACGCTCGTCCTCTTCCTCTACGCCATAAT CACGATC TTTTTGCCGATGGGGAGAACGGGGAAGTTGGTGTACGGGTGCGTGGCGGCGCTGATCTTCTCCGGGTTCATTATCTACGACACCGACAACCTCATCAAGCGATACACCTACGACGAGTACGTGACCGCCGCCATCACGCTCTACCTCGACATCATCAACCTCTTCATGGCCCTCGTCACGGCGCTCCAGGCCGCCGATGGGTAGTAGAACAAGTTTGCCAACCACATTGGGCTGCAGGATGAAGCTGGATCGAAATGTGATTTCTAGTACTTTTTTTTAAACACAAGACAGTGTATGTAAAGATAGGGTTAAACAACTCCTTTGTGATTGGGCATTAACAAGCAAGCA                                                                                                                                                                                                                          ]
[+] EMBL C72070               [           TGACGCCCGCNCCGGCCACAGCTAGCGCGTACG CGCCGCCGCCGCCGCCGTCGTCGTCGTCGTCTCCNATCGATCGACGAACCGAGGCACCAGCAGCACGGAGCTAGGAGGGTAGCGATCGAAACATGGGGAAGCATGGCAAGTGCNACGTGGAGGCGTGCTACCCGGGCGGGGCGCCGGGCGGCGGGATGTACCCGTACATNATCGAAAACGCGCAG TCCGGTGGGCGTTCATCCGCAAGGTGTACGTAATCGTTTCGGTGCAGCTGCTGGTNACCGTNGCCGTCGCCGG GCGGTGAACCTCGTCNAGCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU091302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tttTACGCCATAATCCNCGATCTTTTTTGCCGATGGGGAGANCGGGGAAGTTGGTGTNCGGGTGCGTGCCGGCGCTGATCTTCTCCGGGTTCATTATCTACGACACCGACAACCTCNTCAAGCGATACACCTNCGACGAGTACGTGGCCGCCGCCATCACGCTCTACCTCGACATCATCAACCTCTTCATGGCCCTCGTCACGGCGCTCCAGGCCGCCGATGGGTAGTAGAACAAGTTTGCCAACCACATTGGGCTGCAGGATGAAGCTGGATCGAAATGTGATTTCTAGTACTTTTTTTTAAACACAAGACAGTGTATGTAAAGATAGGGTTAAACAACTCCTTTGTGATTGGGCATTAACAAGCAAGCATTGCCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCGAATGACCACAAGTTTGGTTCCCAGTTAACTAAGACAGGCAAACAAACACAAGCTAAACATATGCAACAGTTGCTGTGACGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTAAAAAAAAAAA]


>consensus_11826#0 CCACCACAGGCTGACGCCCGCGCCGGCCACAGCTAGCGCGTACGCCGCCGCCGCCGCCGC CGTCGTCGTCGTCGTCTCCGATCGATCGACGAACCGAGGCACCAGCAGCACGGAGCTAGG AGGGTAGCGATCGAGACATGGGGAAGCATGGCAAGTGCGACGTGGAGGCGTGCTACCCGG GCGGGGCGCCGGGCGGCGGGATGTACCCGTACATGATCGAGAACGCGCAGCTCCGGTGGG CGTTCATCCGCAAGGTGTACGTGATCGTGTCGGTGCAGCTGCTGGTGACCGTCGCCGTCG CCGGCGCGGTGAACCTCGTCGAGCCCATCAAGACCTTCTTCCAGGCTCGCACGCCGGAGG TCCTCGTCGCCTACGTCATCATCATCATCTCCCCCCTCATCATGATGCTGCCGATGATCT ACTTCCGTAACAAGCATCCGATCAACCTCTTCTTCCTCCTCCTCTTCACCGTCTGTATTA GCTTCTCCGTCGGCCTGGGTTGCCTCTCCAAGAATGGGACAGTGATATTTCAGGCGGCGG GAATGACGGCGGCGATAGTGATCGGACTGACCTGCTACACGTTCTGGGCCGCCAAGAGAG GCTACGACTTCGAGTTCCTCGGCCCATTCCTCTTCGCTGCCACGCTCGTCCTCTTCCTCT ACGCCATAATCACGATCTTTTTGCCGATGGGGAGAACGGGGAAGTTGGTGTACGGGTGCG TGGCGGCGCTGATCTTCTCCGGGTTCATTATCTACGACACCGACAACCTCATCAAGCGAT ACACCTACGACGAGTACGTGACCGCCGCCATCACGCTCTACCTCGACATCATCAACCTCT TCATGGCCCTCGTCACGGCGCTCCAGGCCGCCGATGGGTAGTAGAACAAGTTTGCCAACC ACATTGGGCTGCAGGATGAAGCTGGATCGAAATGTGATTTCTAGTACTTTTTTTTAAACA CAAGACAGTGTATGTAAAGATAGGGTTAAACAACTCCTTTGTGATTGGGCATTAACAAGC AAGCATTGCCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCG AATGACCACAAGTTTGGTTCCCAGTTAACTAAGACAGGCAAACAAACACAAGCTAAACAT ATGCAACAGTTGCTGTGACGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAAT ATGAATTTCTTAAGAAACATGTAACGGTTACTAAAAAAAAAAA



consensusID : consensus_11826#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1127
fasta sequence
                              [TGNCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCGAATGACCACAAGTTGGGTTCCCAGTTAACTAAGACAGGC-AACAAACACAAGCTAAACATATGCGACAGTTGCTGTGATGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTGTGAAGCAGATCGATCGATCGATCAAGAAGGTACCACCACAACTCCAAATATGAATTTCTTAAAGAGGAAACATATGAATTCGCTTGCCACATCAAGCCATCGGTAGCACTACAAAGTAAAGCTCGAGGCCAAGAGGCAAATGTATGGTATCTCCACCAGATCCTGCGGCTCTCAAATTCCTCATGTATAAA--GGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAATTGTTAACTGTTTTTTGTGCCATACACCCATTGGAACATGCTAGCTTCGTATGGTCTTAATGCTCTTCTATCTTCTTCAGGTCCTTCATATTTGTAGTGTCCACAGTTGTTCCGTACAGCGCAATCTTGAGAATTTTTGAGACATCACTTCCACTTTGATTGTCCTCAATAAATATAGTCAGGCTGCGAACATTCTGGAACTTGACATACTTAAGCTGCATAGGCTTACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTGTCACTTGGTGGATAGTCATTGACATTGCTGAAACCCATATGCTCTTTGTTGCAGAAGAGTTTAATTGTTTTCGGGCCATCTTCCTCGGGGCCCTTGAATAGCGCGGAATGCAGCTTAACCACCTGCATGAAGGGGATGTGGATAAGCAGCTGCTCATCCGAATCGCTGGCCAAGTACAGCCCCTCGTCGTCCCTGTAACCCTGCTTGAGGGCGTTAACGATGCTGTGGGCGGGGTCCTGGTTGAGGCACTCGACGCCGCTCCAGTCGATGAAGTCGACCAGATCCACCTGCCCGCGCGGCACCGGCGTCGCCGGAGCTGGGGCCGGAGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGGCCATGGCTTGTGGAGAGGCGGGCGGGTTCGCGTGCGACTCCGACCCTTGCGAAGTTGCGGCTGCGA]

[-] EMBL BQ908215             [TGNCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCGAATGACCACAAGTTGGGTTCCCAGTTAACTAAGACAGGC AACAAACACAAGCTAAACATATGCGACAGTTGCTGTGATGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTGTGAAGCAGATCGATCGATCGATCAAGAAGGTACCACCACAACTCCAAATATGAATTTCTTAAAGAGGAAACATATGAATTCGCTTGCCACATCAAGCCATCGGTAGCACTACAAAGTAAAGCTCGAGGCCAAGAGGCAAATGTATGGTATCTCCACCAGATCCTGCGG TCTCAAATTCCTCATGTATAAA  GGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAA TGTTAACTG TTTTTGTGCCATACACCCA TGGAACATGCTAGCTTCGTATGGTCTTAA GGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AK101877             [                          ATCTTGTCATGACATAGCAAATTGACCGAATGACCACAAGTTTGGTTCCCAGTTAACTAAGACAGGCAAACAAACACAAGCTAAACATATGCAACAGTTGCTGTGACGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTGTGAAGCAGATCGATCGATCGATCAAGAAGGTACCACCACAACTCCAAATATGAATTTCTTAAAGAGGAAACATATGAATTCGCTTGCCACATCAAGCCATCGGTAGCACTACAAGGTAAAGCCCGAGGCCAAGAGGCAAATGTATGGTATCTCCACCAGATCCTGCGGCTCTCAAATTCCTCATGTATAAAATGGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAATTGTTAACTGTTTTTTGTGCCATACACCCATTGGAACATGCTAGCTTCGTATGGTCTTAATGCTCTTCTATCTTCTTCAGGTCCTTCATATTTGTAGTGTCCACAGTTGTTCCGTACAGCGCAATCTTGAGAATTTTTGAGACATCACTTCCACTTTGATTGTCCTCAATAAATATAGTCAGGCTGCGAACATTCTGGAACTTGACATACTTAAGCTGCATAGGCTTACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTGTCACTTGGTGGATAGTCATTGACATTGCTGAAACCCATATGCTCTTTGTTGCAGAAGAGTTTAATTGTTTTCGGGCCATCTTCCTCGGGGCCCTTGAATAGCGCGGAATGCAGCTTAACCACCTGCATGAAGGGGATGTGGATAAGCAGCTGCTCATCCGAATCGCTGGCCAAGTACAGCCCCTCGTCGTCCCTGTAACCCTGCTTGAGGGCGTTAACGATGCTGTGGGCGGGGTCCTGGTTGAGGCACTCGACGCCGCTCCAGTCGATGAAGTCGACCAGATCCACCTGCCCGCGCGGCACCGGCGTCGCCGGAGCTGGGGCCGGAGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGGCCATGGCTTGTGGAGAGGCGGGCGGGTTCGCGTGCGACTCCGACCCTTGCGAAGTTGCGGCTGCGA]
[-] EMBL CA758685             [                                                                                                                                                                                                                                                                                                                                                         AATGTATGGTATCTCCACCAGATCCTGCGGCTCTCAAATTCCTCATGTATAAA  GGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAATTGTTAACTGTTTTTTGTGCCATACACCCATTGGAACATGCTAGCTTCGTATGGTCTTAATGCTCTTCTATCTTCTTCAGGTCCTTCATATTTGTAGTGTCCACAGTTGTTCCGTACAGCGCAATCTTGAGAATTTTTGAGACATCACTTCCACTTTGATTGTCCTCAATAAATATAGTCAGGCTGCGAACATTCTGGAACTTGACATACTTAAGCTGCATAGGCTTACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTGTCACTTGGTGGATAGTCATTGACATTGCTGAAACCCATATGCTCTTTGTTGCAGAAGAGTTTAATTGTTTTCGGGCCATCTTCCTCGGGGCCCTTGAATAGCGCGGAATGCAGCTTAACCACCTGCATGAAGGGGATGTGGATAAGCAGCTGCTCATCCGAATCGCTGGCCAAGTACAGCCCCTCGTCGTCCCTGTAACCCTGCTTGAGGGCGTTAACGATGCTGTGGGCGGGGTCCTGGTTGAGGCACTCGACGCCGCTCCAGTCGATGAAGTCGACCAGATCCACCTGCCCGCGCGGCACCGGCGTCGCCGGAGCTGGGGCCGGAGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGGCCATGGCTTGTGGAGAGGCGGGCGGGTTCGCGTGCGACTCCGACCCTTGCGA              ]
[-] EMBL BE040434             [                                                                                                                                                                                                                                                                                                                                                         AATGTATGGTATCTCCACCAGATCCTGCGGCTCTCAAATTCCTCATGTATAAA  GGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAATTGTTAACTGTTTTTTGTGCCATACACCCATTGGAACATGCTAGCTTCGTATGGTCTTAATGCTCTTCTATCTTCTTCAGGTCCTTCATATTTGTAGTGTCCACAGTTGTTCCGTACAGCGCAATCTTGAGAATTTTTGAGACATCACTTCCACTTTGATTGTCCTCAATAAATATAGTCAGGCTGCGAACATTCTGGAACTTGACATACTTAAGCTGCATAGGCTTACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTGTCACTTGGTGGATAGTCATTGACATTGCTGAAACCCATATGCTCTTTGTTGCAGAAGAGTTTAATT                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_11826#1 TGNCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGCAAATTGACCGAATGAC CACAAGTTGGGTTCCCAGTTAACTAAGACAGGCAACAAACACAAGCTAAACATATGCGAC AGTTGCTGTGATGCAGATCGATCGATCTAACAAGTACCACCACAACTCCAAATATGAATT TCTTAAGAAACATGTAACGGTTACTGTGAAGCAGATCGATCGATCGATCAAGAAGGTACC ACCACAACTCCAAATATGAATTTCTTAAAGAGGAAACATATGAATTCGCTTGCCACATCA AGCCATCGGTAGCACTACAAAGTAAAGCTCGAGGCCAAGAGGCAAATGTATGGTATCTCC ACCAGATCCTGCGGCTCTCAAATTCCTCATGTATAAAGGGGCGCAAAGTTGCCAAGATCA ACTAGAAATTCAATTGTTAACTGTTTTTTGTGCCATACACCCATTGGAACATGCTAGCTT CGTATGGTCTTAATGCTCTTCTATCTTCTTCAGGTCCTTCATATTTGTAGTGTCCACAGT TGTTCCGTACAGCGCAATCTTGAGAATTTTTGAGACATCACTTCCACTTTGATTGTCCTC AATAAATATAGTCAGGCTGCGAACATTCTGGAACTTGACATACTTAAGCTGCATAGGCTT ACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTGTCACTTGGTGGATAGTCATTGAC ATTGCTGAAACCCATATGCTCTTTGTTGCAGAAGAGTTTAATTGTTTTCGGGCCATCTTC CTCGGGGCCCTTGAATAGCGCGGAATGCAGCTTAACCACCTGCATGAAGGGGATGTGGAT AAGCAGCTGCTCATCCGAATCGCTGGCCAAGTACAGCCCCTCGTCGTCCCTGTAACCCTG CTTGAGGGCGTTAACGATGCTGTGGGCGGGGTCCTGGTTGAGGCACTCGACGCCGCTCCA GTCGATGAAGTCGACCAGATCCACCTGCCCGCGCGGCACCGGCGTCGCCGGAGCTGGGGC CGGAGCGGCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGGCCATGGCTTGTGGAGAGGC GGGCGGGTTCGCGTGCGACTCCGACCCTTGCGAAGTTGCGGCTGCGA



consensusID : consensus_11826#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 661
fasta sequence
                              [CCAGCGATTCGGATGAGCAGCTGCTTATCCACACCTCCTTCATGCAGGTGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAAACAATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCACCAAGTGACAGTCTTGACCTGTCTTCCAATCATTTATCAGAGAGTAAGCCTATGCAGCTTAAGTATGTCAAGTTCCAGAATGTTCGCAGCCTGACTATATTTATTGAGGACAATCAAAGTGGAAGTGATGTCTCAAAAATTCTCAAGATTGCGCTGTACGGAACAACTGTGGACACTACAAATATGAAGGACCTGAAGAAGATAGAAGAGCATTAAGACCATACGAAGCTAGCATGTTCCAATGGGTGTATGGCACAAAAAACAGTTAACAATTGAATTTCTAGTTGATCTTGGCAACTTTGCGCCCCATTTTATACATGAGGAATTTGAGAGCCGCAGGATCTGGTGGAGATACCATACATTTGCCTCTTGGCCTCGGGCTTTACCTTGTAGTGCTACCGATGGCTTGATGTGGCAAGCGAATTCATATGTTTCCTCTTTAAGAAATTCATATTTGGAGTTGTGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB000042             [CCAGCGATTCGGATGAGCAGCTGCTTATCCACACCTCCTTCATGCAGGTGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAAACAATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCACCAAGTGACAGTCTTGACCTGTCTTCCAATCATTTATCAGAGAGTAAGCCTATGCAGCTTAAGTATGTCAAGTTCCAGAATGTTCGCAGCCTGACTATATTTATTGAGGACAATCAAAGTGGAAGTGATGTCTCAAAAATTCTCAAGATTGCGCTGTACGGAACAACTGTGGACACTACAAATATGAAGGACCTGAAGAAGATAGAAGAGCATTAAGACCATACGAAGCTAGCATGTTCCAATGGGTGTATGGCACAAAAAACAGTTAACAATTGAATTTCTAGTTGATCTTGGCAACTTTGCGCCCCATTTTATACATGAGGAATTTGAGAGCCGCAGGATCTGGTGGAGATACCATACATTTGCCTCTTGGCCTCGGGCTTTACCTTGTAGTGCTACCGATGGCTTGATGTGGCAAGCGAATTCATATGTTTCCTCTTTAAGAAATTCATATTTGGAGTTGTGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA999098             [  AGCGATTCGGATGAGCAGCTGCTTATCCACATCCCCTTCATGCAGGTGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAAACAATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCACCAAGTGACAGTCTTGACCTGTCTTCCAATCATTTATCAGAGAGTAAGCCTATGCAGCTTAAGTATGTCAAGTTCCAGAATGTTCGCAGCCTGACTATATTTATTGAGGACAATCAAAGTGGAAGTGATGTCTCAAAAATTCTCAAGATTGCGCTGTACGGAACAACTGTGGACACTACAAATATGAAGGACCTGAAGAAGATAGAAGAGCATTAAGACCATACGAAGCTAGCATGTTCCAATGGGTGTATGGCACAAAAAACAGTTAACAATTGAATTTCTAGTTGATCTTGGCAACTTTGCGCCCCATTTTATACATGAGGAATTTGAGAGCCGCAGGATCTGGTGGAGATACCATACATTTGCCTCTTGGCCTCGGGCTTTACCTTGTAGTGCTACCGATGGCTTGATGTGGCAAGCGAATTCATATG                                                                     ]


>consensus_11826#2 CCAGCGATTCGGATGAGCAGCTGCTTATCCACACCTCCTTCATGCAGGTGGTTAAGCTGC ATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAAACAATTAAACTCTTCTGCA ACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCACCAAGTGACAGTCTTGACC TGTCTTCCAATCATTTATCAGAGAGTAAGCCTATGCAGCTTAAGTATGTCAAGTTCCAGA ATGTTCGCAGCCTGACTATATTTATTGAGGACAATCAAAGTGGAAGTGATGTCTCAAAAA TTCTCAAGATTGCGCTGTACGGAACAACTGTGGACACTACAAATATGAAGGACCTGAAGA AGATAGAAGAGCATTAAGACCATACGAAGCTAGCATGTTCCAATGGGTGTATGGCACAAA AAACAGTTAACAATTGAATTTCTAGTTGATCTTGGCAACTTTGCGCCCCATTTTATACAT GAGGAATTTGAGAGCCGCAGGATCTGGTGGAGATACCATACATTTGCCTCTTGGCCTCGG GCTTTACCTTGTAGTGCTACCGATGGCTTGATGTGGCAAGCGAATTCATATGTTTCCTCT TTAAGAAATTCATATTTGGAGTTGTGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11826#0      CCACCACAGGCTGACGCCCGCGCCGGCCACAGCTAGCGCGTACGCCGCCGCCGCCGCCGC 60
consensus_11826#1      ------------------------------TGNCAGTCCAAA--CTGTAGTTTGAATCAT 28
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      CGTCGTCGTCGTCGTCTCCGATCGATCGACGAACCG-AGGCACCAGCAGCACGGAGCTAG 119
consensus_11826#1      C-TTGTCAT-GACATAGCAAATTGACCGAATGACCACAAGTTGGGTTCCCAGTTAACTAA 86
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      GA-GGGTAGCGATCGAGACATGGGGAAGCATGGCAAGTGCGACG-TGGAGGCGTGCTACC 177
consensus_11826#1      GACAGGCAACAAACACAAGCTAAACATATGCGACAGTTGCTGTGATGCAGATCGATCGAT 146
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      CGGGCGGGGCGCCGGGCGGCGGGATGTACCCGTACATGATCGAGAACGCG-CAGCTCCGG 236
consensus_11826#1      CTAACAAGTACCACCACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTG 206
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      TGGGCGTTCATCCGCAAGGTGTACGTGATCGTGTCGGTGCAGCTGCTGGTGACCGTCGCC 296
consensus_11826#1      TGAA-GCAGATCGATCGATCGATCAAGAAGGTACCACCACAACTCCAAATATGAATTTCT 265
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      GTCGCCGGCGCGGTG-AACCTCGTCGAGCCCATCAAGACCTTCTTCCAGGCTCGCACGCC 355
consensus_11826#1      TAAAGAGGAAACATATGAATTCGCTTGCCACATCAAGCCATCGGT--AGCACTACAAAGT 323
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      GGAGGTCCTCGTCGCCTAC-GTCATCATCATCATCTCCCCCCTCATCATGATGCTGCCGA 414
consensus_11826#1      AAAG---CTCGAGGCCAAGAGGCAAATGTATGGTATCTCCACCAG--ATCCTGCGGCTCT 378
consensus_11826#2      --------CCAGCGATTCGGATGAGCAGCTGCTTATCCACACCT----CCTTCATGCAGG 48
                                *   *         *         * **  * *         *   **   

consensus_11826#0      TGATCTACTTCCGTAACAAGCATCCGATCAACCTCTTCTTCCTCCTCCTCTTCACCGTCT 474
consensus_11826#1      CAAATTCCTCATGTATAAAGGGGCGCAAAGTTGCCAAGATCAACTAGAAATTCAAT---- 434
consensus_11826#2      TGGTTAAGCTGCATTCCGCGCTATTCAAGGGCCCCGAGGAAGATGGCCCGAAAACA---- 104
                                    *     *      *       *                  *      

consensus_11826#0      GTATTAGCTTCTCCGTCGGCCTGGGTTGCCTCTCCAAGAATG-GGACAGTGATATTTCAG 533
consensus_11826#1      -TGTTAACTGTTTTTTGTGCC----ATACACCCATTGGAACA-TGCTAGC-----TTCGT 483
consensus_11826#2      --ATTAAACTCTTCTGCAACAAAGAGCATATGGGTTTCAGCAATGTCAATGACTATCCAC 162
                          ***     *       *                  *     *  *       * *  

consensus_11826#0      GCGGCGGGAATGACGGCGGCGATAGTGATCGGACTGACCTGCTACACGTTCTGGGCCGCC 593
consensus_11826#1      ATGGTCTTAATGCT--CTTCTATCTTCTTCAGG------TCCTTCATATT-TGTAGTGTC 534
consensus_11826#2      CAAGTGACAGT-----CTTGACCTGTCTTCCAA------TCATTTATCAGAGAGTAAGCC 211
                          *    * *     *        *  **         *  *  *           * *

consensus_11826#0      AAGAGAGGCTACG-ACTTCGAGTTCCTCGGCCCATTCCTCTTCGCTGCCACGCTCGTCCT 652
consensus_11826#1      CACAGTTGTTCCGTACAGCGCAATCTTGAGAA------TTTTTGAGACATCACTTCCACT 588
consensus_11826#2      TATGCAGCTTAAGTATGTCAAGTTCCAGAA--------TGTTCGCAGCCTGACT---ATA 260
                        *       *  * *   *    **             * ** *   *    **      

consensus_11826#0      CTTCCTCTACGCCATAATCACGATCTTTTTGCCGATGGGGAGAACGGGGAAGTTGGTGTA 712
consensus_11826#1      TTGATTGTCCTCAATAAATATAGTCAGGCTGC------GAACATTCTGGAACTTGACATA 642
consensus_11826#2      TTTATTGAGGACAATCAAAGTGGAAGTGATGTCT-CAAAAATTCTCAAGATTGCGCTGTA 319
                        *   *     * ** *            **         *       **    *   **

consensus_11826#0      CGGGTGCGTGGCGGCGCTGATCTTCTCCGGGTTCATTATCTACGACACCGA-CAACCTCA 771
consensus_11826#1      CTTA-----AGCTGCATAGGCTTACTCTCTGATAAATGATTGGAAGACAGGTCAAGACTG 697
consensus_11826#2      CGGA---ACAACTGTGGACACTACAAATATGAAGGACCTGAAGAAGATAGAAGAGCATTA 376
                       *          * *                *             * *  *   *      

consensus_11826#0      TCAAGCGATACACCTACGACGAGTACGTGACCGCCGCCATCACGCTCTACCTCGACATCA 831
consensus_11826#1      TCACTTGGTGGATAGTCATTG---ACATTGCTGAAACCCATATGCTCTTTGTTGCAG--- 751
consensus_11826#2      AGACCATACGAAGCTAGCATGTTCCAATGGGTGTATGGCACAAAAAACAGTTAACAATT- 435
                         *        *        *      *    *        *         *        

consensus_11826#0      TCAACCTCTTCATGGCCCTCGTCACGGCGCTCCAGGCCGCCGATGGGTAGTAGAACAAGT 891
consensus_11826#1      --AAGAGTTTAATTGTTTTCGG-GCCATCTTCCTCGGGGCCCTTGAATAGCGCGGAATGC 808
consensus_11826#2      --GAATTTCTAGTTGATCTTGG--CAACTTTGC---GCCCCATTTTATA-CATGAGGAAT 487
                          *     *  * *   * *   *     * *      **  *   **           

consensus_11826#0      TTGCCAACCACATTGGGCTGCAGGATGAAGCTGGATCGAAATGTGATTTCTAGTACTTTT 951
consensus_11826#1      AGCTTAACCAC------CTGCATGAAGGGGATG--TGGATAAGCAGCTGCTCATCCGAAT 860
consensus_11826#2      TTGAGAGCCGCA-----GGATCTGGTGGAGATAC-CATACATTTGCCTCTTGGCCTCGGG 541
                            * ** *            *  *  * *      * *      *  *         

consensus_11826#0      TTTTAAAC-ACAAGACAGTGTATGTAAAGATAGGGTTAAACAACTCCTTTGTGATTGGGC 1010
consensus_11826#1      CGCTGGCC-A-AGTACAGCCCCT-------CGTCGTCCCTGTAACCCTGCTTGA--GGGC 909
consensus_11826#2      CTTTACCTTGTAGTGCTACCGATGGCTTGATGTGGCAAGCGAATTCATATGTTT--CCTC 599
                          *       *   *      *           *       *  * *   *       *

consensus_11826#0      ATTAACAAGCAAGCATTGCCAGTCCAAACTGTAGTTTGAATCATCTTGTCATGACATAGC 1070
consensus_11826#1      GTTAACGATGCTGTGGGCGGGGTCCTGGTTGAGGCACTCGACGCCGCTCCAGTCGATG-- 967
consensus_11826#2      TTTAAGAAATTCATATTTGGAGTTGTGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA 659
                        ****  *             **       *                   *    *    

consensus_11826#0      AAATTGACCGAAT--GACCACAAGTTTGGTTCCCAGTTAACTAAGACAGGCAAACAAACA 1128
consensus_11826#1      AAGTCGACCAGATCCACCTGCCCGCGCGGCACCGGCGTCGCCGGAGCTGGGGCCGGAGCG 1027
consensus_11826#2      AA---------------------------------------------------------- 661
                       **                                                          

consensus_11826#0      CAAGCTA-AACATATGCAACAGTTGCTGTGACGCAGATCGATCGATCTAACAAGTACCAC 1187
consensus_11826#1      GCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGGCCATGGCTTGTGGAGAGGCGGGCGGG 1087
consensus_11826#2      ------------------------------------------------------------
                                                                                   

consensus_11826#0      CACAACTCCAAATATGAATTTCTTAAGAAACATGTAACGGTTACTAAAAAAAAAAA 1243
consensus_11826#1      TTCGCGTGCGACTCCGA--CCCTTGCGAA----GTTGCGGCTGCGA---------- 1127
consensus_11826#2      --------------------------------------------------------
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)