cluster # 1183

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1183 cluster # 1183 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1183#0 length = 1779 sequences # 2
consensusID : consensus_1183#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1779
fasta sequence
                              [GACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCTGAACACTACATATCCCCGATATGCTATGTAGATCTCATTGAGTGCCTTGGCTTTTTGGCTACAACGCATCTTGTACTGAATGACTATATGTTTTGCACAAAATCTCTGTTGGCCAAAATGATGAAGTGTCGCACTACCAAGGGTTACTTTGAGACATGTATGGCTCCTAGCACAGATATCGATCTGGGCTATGCAGGTCATTCAGCACGGTGTTTCATATACCTGTCAGTTAAGGATCTTTTGGGAAGCAAGCGTATGATTGTAGAGTGGGTTCAGAACACCTCTACTCCAACTAGTTCTTATGTTCCAATCCTTCTGAGATTAGTTATCACACTTTATCTTGTGACTGTAAACCAAGACGATGGAGATTTGTATGAGGTTACAGCTTTCCTCGAGAAAAATCATGTTTTTACGGATTTACCTCCTGAGTTCTCTGAAAAGATTAGAAATGCTTTGAGGATGAAGTCTCGCACAGTGAAGAACTTCATGAGGGTATTTGCTGATGCCCTTGCAGCAATAGGAACTCGCACGGTAGTTATGGGTGATATTAAGAAGGCAATGGCACATAAATGCCAGCCAGACTTGAATGCTGATATGATTAGCAGTGTGGATTTGAGTGATGCTAAGAAGGTAATGGCACTTCTTTCAACAGAGAAGTCAAGTAGTTTAAAGCAGGAACCTCAGCTGCCAGAGATCAAATCTGTTTGTAACAAAATTTGCAACGCTACTTCTGGTCACTTCCCTTTGACAAGTGTAGGAGGTAGCCAGAAGAGTACAAGTAATTTTAATTTGAGTGATGTGGATCATCCTTTGTTGGAGAAGTTTGAGGCGTTTCAAGTCAATATGCCTCAAAAGAAAAATGGAAGCTTAATTTCTCAAATTCTTAGAAGTCCCCTTTCCTGGATAGAGCAAAGAGCTCCTCCTGT-GCAAATGTTAGAGTTGAGACACATTTGCAAGCAAGTCGAAGAACAGCATGTTAGGGAGAAGAGAGCTTTGTCCGTGAAGGATCTCCATTCAAACCGGGAACATGGTGATGGTGAAAAAAATATTGGGAAGATCGTCGACGTGCAAGGAAG-CCAATCTAACCCTGACAGAGCTAGCGAATGGAGTGGATGCTCAGATGACGAGCAAGAGACGGGAGGAAGTAATGTGGTGCAGTCGACCAAAGAAGCACCAGCCGCTGCCAGCTCCGGCCCCAGCTCCAAAAACAAGCCGCAGAAAAAGAAGAAATCTAAGAAGTCCAAGCGTAGCGG-CAGGAAGTAGTCTCTGTTTTGTTTTGCTCTTCTGCCTGACCAGGCGTCGGATGGCCTTTTTTGCTTACACCGTTGTAAGTCCAGCAGCAAGGCCAGCTTTGCTTAACTGGATGTACTCCCTCCATACTGAAATCGTTTTTGACAGCGACACGGTCTCCAAAACACAACTTTAACTTCCTGTTTCTATAAAAATATTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK106576             [GACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCTGAACACTACATATCCCCGATATGCTATGTAGATCTCATTGAGTGCCTTGGCTTTTTGGCTACAACGCATCTTGTACTGAATGACTATATGTTTTGCACAAAATCTCTGTTGGCCAAAATGATGAAGTGTCGCACTACCAAGGGTTACTTTGAGACATGTATGGCTCCTAGCACAGATATCGATCTGGGCTATGCAGGTCATTCAGCACGGTGTTTCATATACCTGTCAGTTAAGGATCTTTTGGGAAGCAAGCGTATGATTGTAGAGTGGGTTCAGAACACCTCTACTCCAACTAGTTCTTATGTTCCAATCCTTCTGAGATTAGTTATCACACTTTATCTTGTGACTGTAAACCAAGACGATGGAGATTTGTATGAGGTTACAGCTTTCCTCGAGAAAAATCATGTTTTTACGGATTTACCTCCTGAGTTCTCTGAAAAGATTAGAAATGCTTTGAGGATGAAGTCTCGCACAGTGAAGAACTTCATGAGGGTATTTGCTGATGCCCTTGCAGCAATAGGAACTCGCACGGTAGTTATGGGTGATATTAAGAAGGCAATGGCACATAAATGCCAGCCAGACTTGAATGCTGATATGATTAGCAGTGTGGATTTGAGTGATGCTAAGAAGGTAATGGCACTTCTTTCAACAGAGAAGTCAAGTAGTTTAAAGCAGGAACCTCAGCTGCCAGAGATCAAATCTGTTTGTAACAAAATTTGCAACGCTACTTCTGGTCACTTCCCTTTGACAAGTGTAGGAGGTAGCCAGAAGAGTACAAGTAATTTTAATTTGAGTGATGTGGATCATCCTTTGTTGGAGAAGTTTGAGGCGTTTCAAGTCAATATGCCTCAAAAGAAAAATGGAAGCTTAATTTCTCAAATTCTTAGAAGTCCCCTTTCCTGGATAGAGCAAAGAGCTCCTCCTGT GCAAATGTTAGAGTTGAGACACATTTGCAAGCAAGTCGAAGAACAGCATGTTAGGGAGAAGAGAGCTTTGTCCGTGAAGGATCTCCATTCAAACCGGGAACATGGTGATGGTGAAAAAAATATTGGGAAGATCGTCGACGTGCAAGGAAG CCAATCTAACCCTGACAGAGCTAGCGAATGGAGTGGATGCTCAGATGACGAGCAAGAGACGGGAGGAAGTAATGTGGTGCAGTCGACCAAAGAAGCACCAGCCGCTGCCAGCTCCGGCCCCAGCTCCAAAAACAAGCCGCAGAAAAAGAAGAAATCTAAGAAGTCCAAGCGTAGCGG CAGGAAGTAGTCTCTGTTTTGTTTTGCTCTTCTGCCTGACCAGGCGTCGGATGGCCTTTTTTGCTTACACCGTTGTAAGTCCAGCAGCAAGGCCAGCTTTGCTTAACTGGATGTACTCCCTCCATACTGAAATCGTTTTTGACAGCGACACGGTCTCCAAAACACAACTTTAACTTCCTGTTTCTATAAAAATATTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI807160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTCCTGGATAGAGCAAAGAGCTCCTCCTGTGGCNAATGTTAGAGTTGAGACACATTTGCAAGCAAGTCGAAGAACAGCATGTTAGGGAGAAGAGAGCTTTGTCCGTGAAGGATCTCCATTCAAACCGGGAACATGGTGATGGTGAAAAAAATATTGGGAAGATCGTCGACGTGCAAGGAAGCCCAATCTAACCCTGACAGAGCTAGCGAATGGAGTGGATGCTCAGATGACGAGCAAGAGACGGGAGGAAGTAATGTGGTGCAGTCGACCCAAGAAGCACCAGCCGCTGCCAGCTCCGGCCCCAGCTCCAAAAACAAGCCGCAGAAAAAGAAGAAATCTAAGAAGTCCAAGCGTAGCGGCCAGGAAGTAGTCTCTGTTTTGTTTTGCTCTTCTGCCTGACCAGGCGTCGGATGGCCTTTTTTGCTTACACCGTTGTAAGTCCAGCAGCAAGGCCAGCTTTGCTTAACTGGATGTACTCCCTCCATACTGAAATCGTTTTTGAaaaaaaaaa                                                                               ]




>consensus_1183#0
GACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTT
TCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGAT
TCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAAT
TACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGT
CTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCTGAAC
ACTACATATCCCCGATATGCTATGTAGATCTCATTGAGTGCCTTGGCTTTTTGGCTACAA
CGCATCTTGTACTGAATGACTATATGTTTTGCACAAAATCTCTGTTGGCCAAAATGATGA
AGTGTCGCACTACCAAGGGTTACTTTGAGACATGTATGGCTCCTAGCACAGATATCGATC
TGGGCTATGCAGGTCATTCAGCACGGTGTTTCATATACCTGTCAGTTAAGGATCTTTTGG
GAAGCAAGCGTATGATTGTAGAGTGGGTTCAGAACACCTCTACTCCAACTAGTTCTTATG
TTCCAATCCTTCTGAGATTAGTTATCACACTTTATCTTGTGACTGTAAACCAAGACGATG
GAGATTTGTATGAGGTTACAGCTTTCCTCGAGAAAAATCATGTTTTTACGGATTTACCTC
CTGAGTTCTCTGAAAAGATTAGAAATGCTTTGAGGATGAAGTCTCGCACAGTGAAGAACT
TCATGAGGGTATTTGCTGATGCCCTTGCAGCAATAGGAACTCGCACGGTAGTTATGGGTG
ATATTAAGAAGGCAATGGCACATAAATGCCAGCCAGACTTGAATGCTGATATGATTAGCA
GTGTGGATTTGAGTGATGCTAAGAAGGTAATGGCACTTCTTTCAACAGAGAAGTCAAGTA
GTTTAAAGCAGGAACCTCAGCTGCCAGAGATCAAATCTGTTTGTAACAAAATTTGCAACG
CTACTTCTGGTCACTTCCCTTTGACAAGTGTAGGAGGTAGCCAGAAGAGTACAAGTAATT
TTAATTTGAGTGATGTGGATCATCCTTTGTTGGAGAAGTTTGAGGCGTTTCAAGTCAATA
TGCCTCAAAAGAAAAATGGAAGCTTAATTTCTCAAATTCTTAGAAGTCCCCTTTCCTGGA
TAGAGCAAAGAGCTCCTCCTGTGCAAATGTTAGAGTTGAGACACATTTGCAAGCAAGTCG
AAGAACAGCATGTTAGGGAGAAGAGAGCTTTGTCCGTGAAGGATCTCCATTCAAACCGGG
AACATGGTGATGGTGAAAAAAATATTGGGAAGATCGTCGACGTGCAAGGAAGCCAATCTA
ACCCTGACAGAGCTAGCGAATGGAGTGGATGCTCAGATGACGAGCAAGAGACGGGAGGAA
GTAATGTGGTGCAGTCGACCAAAGAAGCACCAGCCGCTGCCAGCTCCGGCCCCAGCTCCA
AAAACAAGCCGCAGAAAAAGAAGAAATCTAAGAAGTCCAAGCGTAGCGGCAGGAAGTAGT
CTCTGTTTTGTTTTGCTCTTCTGCCTGACCAGGCGTCGGATGGCCTTTTTTGCTTACACC
GTTGTAAGTCCAGCAGCAAGGCCAGCTTTGCTTAACTGGATGTACTCCCTCCATACTGAA
ATCGTTTTTGACAGCGACACGGTCTCCAAAACACAACTTTAACTTCCTGTTTCTATAAAA
ATATTTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case