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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3769 fasta sequence
[CTCCGTTGCTTCGCGTCTGGGGCCTCGGGCGGCGCGCGCGGGGAGGGGCGTGGTGCAATTAACGGGCGCGCAGCTCCACCTTGCCGCGATCCGTCGCAATTCTTTGATTCCCTTCGCGGAATTTTTCTTTCTTTTTTTTCCCCATTCCATGTGCGTGGATCTCGGGGCGCGGGGCTAGGGTTTAGTATGGCTTTGGTCAATCCATGGCGTGCGGTGCCGAGGTCGCCCTGTCGCTTCTTCTTTAATGCGCGTTGATCCCCATGGACGGCGAGTGCCGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAGGAGGTGAGTGGGTGTTCAGAGGAACTATTAAATGATGAGAATGGTGATTCTGAAGGATTAAAAGATTCTCATGGTGCCTTGGAAGGATTAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAATGATGAGCTCTCGAGTGGGCAAGATAAGGAACACTGCAAATGACATGTGTGGAAATGGTGAAGCACAGCTTGCATCAATTGAAGAGGAGGAAAGGGCAGCAGATAAGAGTTGTAGAGGGGATCCAGCAGAGGAATCTTCTAATCCAGATAAGGTGGAGCAGGCACAGGACAGGGAACAAGGTGATTCTGCGAGTGCTGCTTTGGAGGGAGGCAATGGCGAGTCTTATTTCCCTTGGAGGGAGGAACTCGAGAGCTTGGTCCGTGGAGGTGTGCCAATGGCTCTTAGAGGAGAGATGTGGCAAGCATTTGTGGGTGTTGGTGCTCGTAAAATTACTGGGTACTACAACAAATTACTAGATGAAGGTACTGAGGAATTGGATGAAAAGAACCCTGAGGACCAAGAGTTGAAAGATCAGACAAATGCACAGAAAAAGCCCCCAGAGAAGTGGAAGGGACAGATAGAGAAGGTTGCTCTCTGATTTGAAATGGGAGGAACTAATGTCATGTTTTAGAAGTTCTACTGTTCTAGGTCTCTACTCTCTACACACTTGAATGCTTGATTTGCCTGTTATCATTATAGGATTTGCCTCGAACATTTCCGGGACACCCTGCACTAGATGAGGACGGGAGAAATGCTTTGCGACGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCAAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGGTTTTATGCAATAGCTTGGTGCTTTCATTAAGATATATACTCATACTTATACATTTGATGTTCGGTACCAGTCCCTTAAATTGAACGAAACATGCATACCAAATTGTTAGGATAATGAGAATCCCGTTCTATTATTTTTTGAATGTTACATATTCTTGTCATGTATGTTAATAATTTGTTAGGTTTAACATCATCTGATTGAAACTTTTGCATTCTCTTAGTTCTTCGTGTTTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGAAGCGAGGAGTTGGAAACTGCTTTGATGGAAATGGTCAAGCAGGACAACAGACATATGTTGAGTGCTAAGGTTGAGAAATTGGAGGCAGAGGTATCTGAGTTGCGAAAGTCCTTTGCAGACAAGCAAGAGCAAGAGCAGGCAATGCTTCAGGTTTTGATAAGAATGGAGCAGGAACAGAAAGTGGCAGAAGATGCCCGCATAGCTGCTGAGAGAGATGCTGCTGATAAGAAATATGCTGCTCAGTTGCTCCAGGAGAAGTATGACGCAGCGATGGCAGCACTTCGACAAATGGAGAAGAGAGCTGTAATGGCCGAAACTATGTTGGAAGCTACAAAGCAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAAACTCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTGGATTACCTGATCACCAGAAAAATGCGTTCATGCAAGCATCAATGTTTTGCCCGCAGGAAGATTCAACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCATATGTATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATGCATCCGTGTAAATTTTCTTTTTCAATTAGTTTTATTAAGATTGTCGATAGTTAGTTCCGGATAGGAGAAAGAAAAGGCACACTACTTCCCATACACATTAGATTAGTTTGCGACGATGTCGTGGTATTATACCGGTGAAGAGCTGTTTTTATACCTCTTCGGGAAGAGTTGTGCAGGAGTAGTGCAAAGAAATGATGTTTTTTTATTCATGTGACTTGCTTTCACACGAGTGCCTTAAGCATATTAATTTCATATGTTGTGTAAACACCGAGTCTCCACTGAGAATGCTCTTTTTTAAAATAAATAAATAAATA]
[+] EMBL AK072879 [CTCCGTTGCTTCGCGTCTGGGGCCTCGGGCGGCGCGCGCGGGGAGGGGCGTGGTGCAATTAACGGGCGCGCAGCTCCACCTTGCCGCGATCCGTCGCAATTCTTTGATTCCCTTCGCGGAATTTTTCTTTCTTTTTTTTCCCCATTCCATGTGCGTGGATCTCGGGGCGCGGGGCTAGGGTTTAGTATGGCTTTGGTCAATCCATGGCGTGCGGTGCCGAGGTCGCCCTGTCGCTTCTTCTTTAATGCGCGTTGATCCCCATGGACGGCGAGTGCCGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAGGAGGTGAGTGGGTGTTCAGAGGAACTATTAAATGATGAGAATGGTGATTCTGAAGGATTAAAAGATTCTCATGGTGCCTTGGAAGGATTAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAATGATGAGCTCTCGAGTGGGCAAGATAAGGAACACTGCAAATGACATGTGTGGAAATGGTGAAGCACAGCTTGCATCAATTGAAGAGGAGGAAAGGGCAGCAGATAAGAGTTGTAGAGGGGATCCAGCAGAGGAATCTTCTAATCCAGATAAGGTGGAGCAGGCACAGGACAGGGAACAAGGTGATTCTGCGAGTGCTGCTTTGGAGGGAGGCAATGGCGAGTCTTATTTCCCTTGGAGGGAGGAACTCGAGAGCTTGGTCCGTGGAGGTGTGCCAATGGCTCTTAGAGGAGAGATGTGGCAAGCATTTGTGGGTGTTGGTGCTCGTAAAATTACTGGGTACTACAACAAATTACTAGATGAAGGTACTGAGGAATTGGATGAAAAGAACCCTGAGGACCAAGAGTTGAAAGATCAGACAAATGCACAGAAAAAGCCCCCAGAGAAGTGGAAGGGACAGATAGAGAAGGTTGCTCTCTGATTTGAAATGGGAGGAACTAATGTCATGTTTTAGAAGTTCTACTGTTCTAGGTCTCTACTCTCTACACACTTGAATGCTTGATTTGCCTGTTATCATTATAGGATTTGCCTCGAACATTTCCGGGACACCCTGCACTAGATGAGGACGGGAGAAATGCTTTGCGACGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCAAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGGTTTTATGCAATAGCTTGGTGCTTTCATTAAGATATATACTCATACTTATACATTTGATGTTCGGTACCAGTCCCTTAAATTGAACGAAACATGCATACCAAATTGTTAGGATAATGAGAATCCCGTTCTATTATTTTTTGAATGTTACATATTCTTGTCATGTATGTTAATAATTTGTTAGGTTTAACATCATCTGATTGAAACTTTTGCATTCTCTTAGTTCTTCGTGTTTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGAAGCGAGGAGTTGGAAACTGCTTTGATGGAAATGGTCAAGCAGGACAACAGACATATGTTGAGTGCTAAGGTTGAGAAATTGGAGGCAGAGGTATCTGAGTTGCGAAAGTCCTTTGCAGACAAGCAAGAGCAAGAGCAGGCAATGCTTCAGGTTTTGATAAGAATGGAGCAGGAACAGAAAGTGGCAGAAGATGCCCGCATAGCTGCTGAGAGAGATGCTGCTGATAAGAAATATGCTGCTCAGTTGCTCCAGGAGAAGTATGACGCAGCGATGGCAGCACTTCGACAAATGGAGAAGAGAGCTGTAATGGCCGAAACTATGTTGGAAGCTACAAAGCAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAAACTCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTGGATTACCTGATCACCAGAAAAATGCGTTCATGCAAGCATCAATGTTTTGCCCGCAGGAAGATTCAACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCATATGTATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATGCATCCGTGTAAATTTTCTTTTTCAATTAGTTTTATTAAGATTGTCGATAGTTAGTTCCGGATAGGAGAAAGAAAAGGCACACTACTTCCCATACACATTAGATTAGTTTGCGACGATGTCGTGGTATTATACCGGTGAAGAGCTGTTTTTATACCTCTTCGGGAAGAGTTGTGCAGGAGTAGTGCAAAGAAATGATGTTTTTTTATTCATGTGACTTGCTTTCACACGAGTGCCTTAAGCATATTAATTTCATATGTTGTGTAAACACCGAGTCTCCACTGAGAATGCTCTTTTTTAAAATAAATAAATAAATA]
[+] EMBL AU077437 [ TGAATTTCCCATGAAGTTTTGCTGAAATTGTCATATGTATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATGCATCCGTGTAAATTTTCTTTTTCAATTAGTTTTATTAAGATTGTCGATAGTTAGTTCCGGATAGGAGAAAGAAAAGGCACACTACTTCCCATACACATTAGATTAGTTTGCGACGATGTCGTGGTATTATACCGGTGAAGAGCTGTTTTTATACCTCTTCGGGAAGAGTTGTGCAGGAGTAGTGCAAAGAAATGATGTTTTTTTATTCATGTGACTTGCTTTCACACGAGTGCCTTAAGCATATTAATTTCATATGTTGTGT ]
consensusID : consensus_11839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1180 fasta sequence
[CGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGTTCTTCGTGT-TTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGGTTTGTTGTGCTTCTATTCTGGATCTATTTATCCACATAGTTAAATTGTACAGGTATAGTTACAAAGAAGAATAGCAATAGTACGGAAGCTATCCCAGCCACTGCTAGATATAACAACCTGCAAAACTCGGAACTCTTAAATATAAATCGTTAAGGAGGGAATTTCTCCATCTAAACTTATTTGGAGCATTCCATCAAAGATGTGTCTGGTTCTTTCCAACCAGATAGGCCAGCTCCCAGCATTCAAGAGTAATTAGTTCTTTAAGAATAATTCCCCCTTTTCTCAGT]
[-] EMBL CB631872 [CGGTTATTAACAGCATATGCAAGGCATAACCCATCAGTTGGATACTGCCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGTTCTTCGTGT TTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCGGT ]
[-] EMBL CB631831 [ TATGCAAGGCATAACCCATCAGTTGGATACTGCCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGTTCTTCGTGT TTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGT ]
[+] EMBL AA753622 [ tttTGTNTTGGGA GT A NCNTTTGGAAGG AATCG ANGA G TNTTCCGGACAA GCTTG TTTG TTGA TNATAT GGCCTGCCCTGGNGACNAC AAGGATGCTGGAGATGCAATAACATTATTGC ATNTCTTGCTGG TTTANTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCT ]
[+] EMBL CF326271 [ CGCCATTCTTGGAAAGATAAGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCAAGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAAGATCAGCTGAACTCAGGTTTGTTGTGCTTCTATTCTGGATCTATTTATCCACATAGTTAAATTGTACAGGTATAGTTACAAAGAAGAATAGCAATAGTACGGAAGCTATCCCAGCCACTGCTAGATATAACAACCTGCAAAACTCGGAACTCTTAAATATAAATCGTTAAGGAGGGAATTTCTCCATCTAAACTTATTTGGAGCATTCCATCAAAGATGTGTCTGGTTCTTTCCAACCAGATAGGCCAGCTCCCAGCATTCAAGAGTAATTAGTTCTTTAAGAATAATTCCCCCTTTTCTCAGT]
consensusID : consensus_11839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 781 fasta sequence
[CGGCTCGGCTCGCACCATTTCCAGTATACAGGTCCACGCCTCCACGTGACAGGTGCTCGAAGAAGAAGGGCTCTGCTTTTGCTTGCTTTGCTCCCCGACCCGGCCGGCACGGCGTGCGCCGCCAAGCCGCCGCCGCCCGCCATGGGCGCCATGGGCGCGGCGGCGTTCGACTTCGAGTACAAGAGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAGGAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAAT]
[+] EMBL CB631830 [CGGCTCGGCTCGCACCATTTCCAGTATACAGGTCCACGCCTCCACGTGACAGGTGCTCGAAGAAGAAGGGCTCTGCTTTTGCTTGCTTTGCTCCCCGACCCGGCCGGCACGGCGTGCGCCGCCAAGCCGCCGCCGCCCGCCATGGGCGCCATGGGCGCGGCGGCGTTCGACTTCGAGTACAAGAGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAGGAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGAAGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAAT]
[+] EMBL CB631871 [CGGCTCGGCTCGCACCATTTCCAGTATACAGGTCCACGCCTCCACGTGACAGGTGCTCGAAGAAGAAGGGCTCTGCTTTTGCTTGCTTTGCTCCCCGACCCGGCCGGCACGGCGTGCGCCGCCAAGCCGCCGCCGCCCGCCATGGGCGCCATGGGCGCGGCGGCGTTCGACTTCGAGTACAAGAGGGACGCGTATGGATTCGCGGTGCGGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAATTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAGGAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAACGGGTTGATGGATGAACTGATGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAAT]
consensusID : consensus_11839#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 640 fasta sequence
[CAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAAACTCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTGGATTACCTGATCACCAGAAAAATGCGTTCATGCAAGCATCAATGTTTTGCCCGCAGGAAGATTCAACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCATATGTATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATGCATCCGTGTAAATTTTCTTTTTCAATTAGTTTTATTAAGATTGTCGATAGTTAGTTCCGGATAGGAGAAAGAAAAGGCACACTACTTCCCATACACATTAAATTAGTTTGCGACGATGTCGTGGTATTATACCGGTGAAGAGCTGTTTTTATACCTCTTCGGGAAGAGTTGTGCAGGAGTAGTGCAAAGAAATGATGTTTTTTTAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[-] EMBL CF326291 [CAGTACCAGGCAGGGCAGTTTAAGGCCAACCAGTCCTTCAATCCAAGTTCACCTCGTGCTGCCCCTCAGTCTGGGAAGCCAAATCAAGATCCTAACCAGGATGCACCTAACAGGAGATTGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAAAGCAAGGGAAAGTCTAGTTCCACTGAAACACCTGAAGGCTAAACTCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTGGATTACCTGATCACCAGAAAAATGCGTTCATGCAAGCATCAATGTTTTGCCCGCAGGAAGATTCAACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCATATGTATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATGCATCCGTGTAAATTTTCTTTTTCAATTAGTTTTATTAAGATTGTCGATAGTTAGTTCCGGATAGGAGAAAGAAAAGGCACACTACTTCCCATACACATTAAATTAGTTTGCGACGATGTCGTGGTATTATACCGGTGAAGAGCTGTTTTTATACCTCTTCGGGAAGAGTTGTGCAGGAGTAGTGCAAAGAAATGATGTTTTTTTAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11839#0 CTCCGTTGCTTCGCGTCTGGGGCCTCGGGCGGCGCGCGCGGGGAGGGGCGTGGTGCAATT 60
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AACGGGCGCGCAGCTCCACCTTGCCGCGATCCGTCGCAATTCTTTGATTCCCTTCGCGGA 120
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATTTTTCTTTCTTTTTTTTCCCCATTCCATGTGCGTGGATCTCGGGGCGCGGGGCTAGGG 180
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTTAGTATGGCTTTGGTCAATCCATGGCGTGCGGTGCCGAGGTCGCCCTGTCGCTTCTTC 240
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTTAATGCGCGTTGATCCCCATGGACGGCGAGTGCCGGGACGCGTATGGATTCGCGGTGC 300
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GGCCGCAGCATCTGCAGCGTTTCCGCGAGTATGCCAAGATTTACAAGGAAGAAGAAGAGG 360
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AGAGAGCGGACAGATGGAAGGACTTCTTGGACAGGTTGGCTGAATCTGCAGATGACATCA 420
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 CAACCAGCATTTCACCTTCCAAAGAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAAC 480
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ACCTTGATGGAGCTGAAAACTTAGAGAATAGCAATAGGGGTGGAATAAAATGCAACAATG 540
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AAGAAGAGGAGGGAGAAGAGGATGCAGAAAAGAGCGATACACCAGAAAATTCGAAGGAAA 600
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTGATGGCAACAATCAATCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTAT 660
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 CTGCCAACTCAGAAAATCTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAG 720
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 CTCCAGAAGAATTGAAGGAGGTGAGTGGGTGTTCAGAGGAACTATTAAATGATGAGAATG 780
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GTGATTCTGAAGGATTAAAAGATTCTCATGGTGCCTTGGAAGGATTAGGTGAAGCGAACA 840
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ACGACAACTCGGAAAAGTTAGAAGAGCTTTTCTTGGATAAGGGGTTGTTGGATGAACTGA 900
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AGCCTATAAGAGTTGAGTCTGGGAAGCGGGTGCGGGCATCAATCAGAATCATTGAGAAAA 960
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TGATGAGCTCTCGAGTGGGCAAGATAAGGAACACTGCAAATGACATGTGTGGAAATGGTG 1020
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AAGCACAGCTTGCATCAATTGAAGAGGAGGAAAGGGCAGCAGATAAGAGTTGTAGAGGGG 1080
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATCCAGCAGAGGAATCTTCTAATCCAGATAAGGTGGAGCAGGCACAGGACAGGGAACAAG 1140
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GTGATTCTGCGAGTGCTGCTTTGGAGGGAGGCAATGGCGAGTCTTATTTCCCTTGGAGGG 1200
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AGGAACTCGAGAGCTTGGTCCGTGGAGGTGTGCCAATGGCTCTTAGAGGAGAGATGTGGC 1260
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AAGCATTTGTGGGTGTTGGTGCTCGTAAAATTACTGGGTACTACAACAAATTACTAGATG 1320
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AAGGTACTGAGGAATTGGATGAAAAGAACCCTGAGGACCAAGAGTTGAAAGATCAGACAA 1380
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATGCACAGAAAAAGCCCCCAGAGAAGTGGAAGGGACAGATAGAGAAGGTTGCTCTCTGAT 1440
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTGAAATGGGAGGAACTAATGTCATGTTTTAGAAGTTCTACTGTTCTAGGTCTCTACTCT 1500
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 CTACACACTTGAATGCTTGATTTGCCTGTTATCATTATAGGATTTGCCTCGAACATTTCC 1560
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GGGACACCCTGCACTAGATGAGGACGGGAGAAATGCTTTGCGACGGTTATTAACAGCATA 1620
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TGCAAGGCATAACCCATCAGTTGGATACTGCAAGGCCATGAACTTTTTTGCTGGCCTATT 1680
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTTATTATTCATGCCTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTA 1740
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTTTGATGGTTATTACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGA 1800
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GGAAGTTGTACGAGAAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCA 1860
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GGTGGCATGGGTGACTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGA 1920
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AAGTGGTCAGGTTTTATGCAATAGCTTGGTGCTTTCATTAAGATATATACTCATACTTAT 1980
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ACATTTGATGTTCGGTACCAGTCCCTTAAATTGAACGAAACATGCATACCAAATTGTTAG 2040
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GATAATGAGAATCCCGTTCTATTATTTTTTGAATGTTACATATTCTTGTCATGTATGTTA 2100
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATAATTTGTTAGGTTTAACATCATCTGATTGAAACTTTTGCATTCTCTTAGTTCTTCGTG 2160
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TTTGGGATGTGATCCTTTTTGAAGGAAATCGAACGATGTTGTTCCGGACAACGCTTGCTT 2220
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAATTACAT 2280
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAGCTTGTA 2340
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 TGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACAGGCCTG 2400
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATAAGAAGG 2460
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GTTTAGCAACTAAACTTTACAGCTTTAAACATGATCCTCTATGCCCACAAGTTAATTCCA 2520
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 AGGAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTAGATTCTGGGTCAG 2580
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 CAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTGGAAGAGGGCATTG 2640
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 ATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTGCTCGAGGAGAAAA 2700
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ------------------------------------------------------------
consensus_11839#0 GATCAGCTGAACTCAGAAGCGAGGAGTTGGAAACTGCTTTGATGGAAATGGTCAAGCAGG 2760
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 -----------------------------CGGTTATTAACAGCATATGCAAGGCATAACC 31
consensus_11839#0 ACAACAGACATATGTTGAGTGCTAAGGTTGAGAAATTGGAGGCAGAGGTATCTGAGTTGC 2820
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 CATCAGTTGGATACTGCCAGGCCATGAACTTTTTTGCTGGCCTATTTTTATTATTCATGC 91
consensus_11839#0 GAAAGTCCTTTGCAGACAAGCAAGAGCAAGAGCAGGCAATGCTTCAGGTTTTGATAAGAA 2880
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 CTGAAGAGCATGCATTCTGGGCTCTGGTGGGGGTCATTGATGAGTATTTTGATGGTTATT 151
consensus_11839#0 TGGAGCAGGAACAGAAAGTGGCAGAAGATGCCCGCATAGCTGCTGAGAGAGATGCTGCTG 2940
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 ACACTGAGGAAATGATTGAATCTCAGGTTGACCAGCTTGTTCTTGAGGAAGTTGTACGAG 211
consensus_11839#0 ATAAGAAATATGCTGCTCAGTTGCTCCAGGAGAAGTATGACGCAGCGATGGCAGCACTTC 3000
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 ------------------------------------------------------------
consensus_11839#1 AAAGATTCCCAAAACTTGCAAAGCATATGGATTTCCTGGGAGTTCAGGTGGCATGGGTGA 271
consensus_11839#0 GACAAATGGAGAAGAGAGCTGTAATGGCCGAAACTATGTTGGAAGCTACAAAGCAGTACC 3060
consensus_11839#3 -----------------------------------------------------CAGTACC 7
consensus_11839#2 --------------------------------------CGGCTCGGCTCGCACCATTTCC 22
consensus_11839#1 CTGGACCATGGTTTCTTTCAATTTTCATCAATATGCTTCCATGGGAAAGTGGTCAGTTCT 331
** * *
consensus_11839#0 AG---GCAGGGCA--GTTTAAGGCCAACCAGTCCTTCAA---------TCCAAGTTCACC 3106
consensus_11839#3 AG---GCAGGGCA--GTTTAAGGCCAACCAGTCCTTCAA---------TCCAAGTTCACC 53
consensus_11839#2 AGTATACAGGTCCACGCCTCCACGTGACAGGTGCTCGAAGAAGAAGGGCTCTGCTTTTGC 82
consensus_11839#1 TCGTGTTTGGGATGTGATCCTTTTTGA-AGGAAATCGAACGATGTTGTTCCGGACAACGC 390
** * * * * ** * *
consensus_11839#0 TCGTGCTGCCC------------CTCAGTCTGGGAAGC-CAAATCAAGATCCTAACCAGG 3153
consensus_11839#3 TCGTGCTGCCC------------CTCAGTCTGGGAAGC-CAAATCAAGATCCTAACCAGG 100
consensus_11839#2 TTGCTTTGCTC------------CCCGACCCGGCCGGCACGGCGTGCGCCGCCAAGCCGC 130
consensus_11839#1 TTGCTTTGCTCGACTTATATGGGCCTGCCCTGGTGACCACAAAGGATGCTGGAGATGCAA 450
* * *** * * * ** * * * *
consensus_11839#0 ATGCACC-TAACAGGAGAT---TGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAA 3209
consensus_11839#3 ATGCACC-TAACAGGAGAT---TGGGCTTGCTTTCTAGGGGCCTTGGTTGGCTAGAGAAA 156
consensus_11839#2 CGCCGCC-CGCCATGGGCGCCATGGGCGCGGCGGCGTTCGACTTCGAGTA-CAAGAGGGA 188
consensus_11839#1 TTACATTATTGCAATCTCTTGCTGGCTCTACTTTTGACAGCAGTCAACTTGTGTTGACAG 510
* ** *** * * *
consensus_11839#0 AGCAAGGGAAAGTCTAG-------------TTCCACTGAAACACCTGAAG---------- 3246
consensus_11839#3 AGCAAGGGAAAGTCTAG-------------TTCCACTGAAACACCTGAAG---------- 193
consensus_11839#2 CGCGTATGGATTCGCGG-------------TGCGGCCGCAGCATCTGCAGCGTTTCCGCG 235
consensus_11839#1 CTTGTATGGGTTTTCAAGCAGTCAGGGAAATAGGGCTGCAGGAGTTAAGGAAAAAACACA 570
* * * * * * * *
consensus_11839#0 -----GCTAA-AC---TCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTG---GATT 3294
consensus_11839#3 -----GCTAA-AC---TCCTGTCGAATCAGGACATGATTGTTGCTAAGGATTG---GATT 241
consensus_11839#2 AGTATGCCAAGAT---TTACAAGGAAGAAGAAGAGGAGAGAGCGGACAGATGGAAGGACT 292
consensus_11839#1 GGCCTGATATTATATCTGCTATGGAGGAAAGATCAAAAGACCGCCATTCTTGGAAAGATA 630
* * * * ** * * * * * * **
consensus_11839#0 ACCTGATCA--CCAGAAAAA-TGCGTTCATGCAAGCAT---CAATGTTTTGCCCGC--AG 3346
consensus_11839#3 ACCTGATCA--CCAGAAAAA-TGCGTTCATGCAAGCAT---CAATGTTTTGCCCGC--AG 293
consensus_11839#2 TCTTGGACAGGTTGGCTGAA-TCTGCAGATGACATCACAACCAGCATTTCACCTTCCAAA 351
consensus_11839#1 AGAAGGGTTTAGCAACTAAACTTTACAGCTTTAAACAT----GATCCTCTATGCCCACAA 686
* ** * * * ** * * *
consensus_11839#0 GAAGATTC----------AACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCA-TATG 3395
consensus_11839#3 GAAGATTC----------AACATGAATTTCCCATGAAGTTTTGCTGAAATTGTCA-TATG 342
consensus_11839#2 GAGGACTCTGCTGCTGGAGATGTCAATGGTGGAGAACACCTTGATGGAGCTGAAAACTTA 411
consensus_11839#1 GTTAATTCCAAG---GAAGGGGAAGATGATTTGCAAGTGAATGGGGAAATGCAATTTTTA 743
* * ** ** * ** * * *
consensus_11839#0 TATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATG 3455
consensus_11839#3 TATCATATCGAGCCCAGTTGTCAGATGCAGCTTCCTTGTTAGGTTCGAATTGTTGTAATG 402
consensus_11839#2 GAGAATAGCAA---TAGGGGTGGAATAAAATGCAACAATGAAGAAGAGGAGGGAGAAGAG 468
consensus_11839#1 GATTCTGGGTCAGCAAATCTAGAAACCTACCTTACTAGTTCAGCTCTAGATAATGAGTTG 803
* * * * * * * * *
consensus_11839#0 CATCCGTGTA--AATTTTCTTTTTCAATTAGTTTTATTAAGA-TTGTCGATAGTTAGT-- 3510
consensus_11839#3 CATCCGTGTA--AATTTTCTTTTTCAATTAGTTTTATTAAGA-TTGTCGATAGTTAGT-- 457
consensus_11839#2 GATGCAGAAA--AGAGCGATACACCAGAAAATTCGAAGGAAA-TTGATGGCAACAATCAA 525
consensus_11839#1 GAAGAGGGCATTGATCTTCAAGATCAGGTAACATGGTTGAAAGTTGAGCTGTGCAAACTG 863
* * ** * * * *** *
consensus_11839#0 TCCGGATAGGAGAAAGAAAAGGCACACTACTTCC----CATACACATTAGATTAG----T 3562
consensus_11839#3 TCCGGATAGGAGAAAGAAAAGGCACACTACTTCC----CATACACATTAAATTAG----T 509
consensus_11839#2 TCGCAAGAAGCAAATGGTGAGGCGGACGATATCAATGATGTATCTGCCAACTCAGAAAAT 585
consensus_11839#1 CTCGAGGAGAAAAGATCAGCTGAACTCAGGTTTG-----TTGTGCTTCTATTCTGGATCT 918
* * * * * * * * *
consensus_11839#0 TTGCGACGATGTCGTGGTATTATACCGGTGAA----GAGCTGTTTTTATACCTCTTCGGG 3618
consensus_11839#3 TTGCGACGATGTCGTGGTATTATACCGGTGAA----GAGCTGTTTTTATACCTCTTCGGG 565
consensus_11839#2 CTGAAACAGGAGAGCATTGCAAACTCCGTAGAATCGGACAAAGCTCCAGAAGAATTGAAG 645
consensus_11839#1 ATTTATCCACATAGTTAAATTGTACAGGTATAGTTACAAAGAAGAATAGCAATAGTACGG 978
* * * ** * * * * *
consensus_11839#0 AAG---AGTTGTGCAGGAGTAGTGCAAAGAAAT-----GATGTT----TTTTTATTCATG 3666
consensus_11839#3 AAG---AGTTGTGCAGGAGTAGTGCAAAGAAAT-----GATGTT----TTTTTAAAAAAA 613
consensus_11839#2 GAGGTGAAGCGAACAACGACAACTCGGAAAAGTTAGAAGAGCTT----TTCTTGGATAAG 701
consensus_11839#1 AAGCT-ATCCCAGCCACTGCTAGATATAACAACCTGCAAAACTCGGAACTCTTAAATATA 1037
** * * * * * * * ** *
consensus_11839#0 TGACTTGCTTTCACACGAGTGCCTTAAGC-ATATTAATTTCATATGTTGTGTAAACACCG 3725
consensus_11839#3 AAAA--------AAAAAAAAAACTCGAG----ACTAGTT--------------------- 640
consensus_11839#2 GGGTTGTTGGATGAACTGAAGCCTATAAG-AGTTGAGTCTGGGAAGCGGGTGCGGGCATC 760
consensus_11839#1 AATC--GTTAAGGAGGGAATTTCTCCATCTAAACTTATTTGGAGCATTCCATCAAAGATG 1095
** * *
consensus_11839#0 AGTCTCCACTGAGAATGCTCTTTTTTAAAATAAATAAATAAATA---------------- 3769
consensus_11839#3 ------------------------------------------------------------
consensus_11839#2 AATCAGAATCATTGAGAAAAT--------------------------------------- 781
consensus_11839#1 TGTCTGGTTCTTTCCAACCAGATAGGCCAGCTCCCAGCATTCAAGAGTAATTAGTTCTTT 1155
consensus_11839#0 -------------------------
consensus_11839#3 -------------------------
consensus_11839#2 -------------------------
consensus_11839#1 AAGAATAATTCCCCCTTTTCTCAGT 1180
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||