cluster # 11845

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Oryza sativa
cluster # 11845 cluster # 11845 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11845#0 length = 1442 sequences # 9
consensusID : consensus_11845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1442
fasta sequence
                              [ACTCGTTTCCCGTCTCGTCCGCATCGATCGGCGCCGGCAGTTTTCGAATTTGGGGTTTGAGAAGGTTGAGGAGGAGTTGGGAGGTTGAGAAGGCGGCGGCTGATTCGTTGGGTTCGATCGGGCTCATGGCGACGGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGGCGTCGAAGCTGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGAGCGGCTCCGTGGCGAGGAGTTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTT-GGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGAT-CACTGTGAACTCTT-CAGAACAG-CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAA-GGAAGCAGCTAAAAAAG-ACAACATTCAGAAGAAG-CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA-AGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCA-ATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCA-AGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTTATCG-CTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCA-T-TTGTTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGTCATGCATCTGAATATAATTGAATTCTTTATTTGTGTGAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073322             [ACTCGTTTCCCGTCTCGTCCGCATCGATCGGCGCCGGCAGTTTTCGAATTTGGGGTTTGAGAAGGTTGAGGAGGAGTTGGGAGGTTGAGAAGGCGGCGGCTGATTCGTTGGGTTCGATCGGGCTCATGGCGACGGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGGCGTCGAAGCTGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGAGCGGCTCCGTGGCGAGGAGTTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTT GGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGAT CACTGTGAACTCTT CAGAACAG CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAA GGAAGCAGCTAAAAAAG ACAACATTCAGAAGAAG CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA AGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCA ATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCA AGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTTATCG CTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCA T TTGTTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGTCATGCATCTGAATATAAT                                            ]
[+] EMBL OSS14431A            [                                                                                                                                                                                                                                                                   TTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTT GGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAG TGAGCTAAAGGCTTATGTTGTCCGGCATGG CTTGCAACAGAGTTGGAGGACCCAGTNAAGGNTATTCTTCAGGGTTTCAATATCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB682814             [                                                                                                                                                                                                                                                                                           ATCTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTT GGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGAT CACTGTGAACTCTT CAGAACAG CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAA GGAAGCAGCTAAAAAAG ACAACATTCAGAAGAAG CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA AGAAGCAGGTCAAGGGGCAGAANGAAGATTGCA ATGGAGGCAGCGAGGCTTT                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS15274A            [                                                                                                                                                                                                                                                                                             CTTTGGATGTCAGCAAGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGAGGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCACTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGATATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTTGGGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTNGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGG CTTGCAACAGAGTTGGAGGAACCAGTGAAGG TATTCTTCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS10962A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCATATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTT GGGCTTCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAAAGGCTTATGTTGTCCGGCATGGNCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGAT CACTGTGAACTCTT CAGAACAG CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGGAAGCAGCTAAAAAAG GCAACATTCAG AGGAG GCTGATGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB682815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCTAAAGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTCTTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGAT CACTGTGAACTCTT CAGAACAG CCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAA GGAAGCAGCTAAAAAAG ACAACATTCAGAAGAAG CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA AGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCA ATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCA AGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTTATCG CTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCA T TTGTTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGTCATGCATCGGAATATAATTGAATTCTT                                   ]
[+] EMBL AU096606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATATCGTGGAGGATCTTGAGAAGCTAAAGAT CACTGTGAACTCTT CAGAACAGCCCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTAATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAA GGAAGCAGCTAAAAAAG ACAACATTCAGAAGAAG CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA AGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCA ATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCA AGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTTATCG CTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCA T TTGTTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGTCATGCATCTGAATATAATTGAATTCTTTATTTGTGTGAAAAAAA                  ]
[+] EMBL AU086003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCTAAAGATCCNCTGTGAACTCTTNCAGAACAGCCCGAAAAAGTCTNACAAGGCTGCTCATAGTNCCCCCAATGTGTCNCCAAAGGGTAATCTGAAGCCAAGATCGCTG ATTCTGATGCAGCTCAAAGTAA GGAAGCAGCTAAAAAAG NCAACATTCAGAAGAAG CCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCA AGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCA ATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCA AGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGGATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTTATCG CTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCA T TTGTTCATATATCGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGTCATGCATCTGAATATAATTGAATTCTTTATTTGTGTGATAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI798176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGAATTCTGATCCAGCTCAAAGTAA GGAACCAGCTAAAAAAGCAC ACATTCAGAAGAAGCCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCCAAAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCACAGAAGCAGGTCAAGGGGCAGAAGGAAGATTGCACATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCACAGAACCTGTTGATGTGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCCATGGATCTTGGCATAGCCCAAGAAATCTAGAACAGCCCAACCGACTTCAGATTCAAATCTTTTTATCGCCTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCACTCTTGTTCATATATCGCTGGAGCTTGCCTTATTATCCAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTTGCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGC ATTCTGAATTGTCCAGTCATGCATCCGAATATAATTGAATTCTTTATTTGTGTGAAAAA                    ]




>consensus_11845#0
ACTCGTTTCCCGTCTCGTCCGCATCGATCGGCGCCGGCAGTTTTCGAATTTGGGGTTTGA
GAAGGTTGAGGAGGAGTTGGGAGGTTGAGAAGGCGGCGGCTGATTCGTTGGGTTCGATCG
GGCTCATGGCGACGGCTTCCGGCGATCAGTCGGCGGGTTCCGCGGCGAGGGCGTCGAAGC
TGAGGTACCCGCTCCGGTCGGCGAGCCGGGGGAAGGGCGCCGCCGATGCTCCTCCGACGA
GCGGCTCCGTGGCGAGGAGTTTTATTCCTTGCAGACCAAAACCATCTTTGGATGTCAGCA
AGAGCGTTTGTGGTCTTGATCTTTCATCGGTGAAGGATAATTCAGCCAAACCTCCACGGA
GGCACTCAATACAGACCAAGCCAGGTGTTAGCCCCAGGCCAACTCCTACAGGAACTATCA
CTCCTGTGTCATTGGTTCGTTCAAGGAGGTCCGATAGTCAAGGGAAGTTTGATACCCCGA
TATCAGAAGTTTCCATGTCCACAGCAAGGCGCAAGTTCAGCACTCTGTCCTCAACCTCAT
ATTGGATGACACAAATCAGGCTTGCAGAGGCTGCTTCCAAGCACTCTATATCGTTGGGCT
TCTTTAAGCTTGCACTTGAATCAGAATGCGAGCCTCTGGATCGTATGAGAGATGAGCTAA
AGGCTTATGTTGTCCGGCATGGCCTTGCAACAGAGTTGGAGGAACCAGTGAAGGATATTC
TTCAGGTTTACAATATCGTGGAGGATCTTGAGAAGCTAAAGATCACTGTGAACTCTTCAG
AACAGCCGAAAAAGTCTGACAAGGCTGCTCATAGTGCCACCAATGTGTCACCAAAGGGTA
ATCTGAAGCCAAGATCGCTGAATTCTGATGCAGCTCAAAGTAAGGAAGCAGCTAAAAAAG
ACAACATTCAGAAGAAGCCTGATGCAAAGGTTAGAGGCTCCTACAACCGGAATCCTGCAA
AAGAAGCCATCACCAAGAATACTGGTAAGAAAGCCAAGAAGCAGGTCAAGGGGCAGAAGG
AAGATTGCAATGGAGGCAGCGAGGCTTTGCCAGTTGGTACAGAGCAAGAACCTGTTGATG
TGGTGAAGGAGGTGACAAATGAAGATAAGGAGAATATGGGGGACAGTGAAATGCCAATGG
ATCTTGGCATAGCCCAAGAAATCTAGAACAACCAAACCGACTTCAGATTCAAATCTTTTT
ATCGCTGGATATGAAGTAGAGTGTGTGGTGCTTGTTTTTTCCCCTCATTTGTTCATATAT
CGCTGGAGCTTGCCTTATTATCAAAACCATAAAGAGGTCTTTAAGTGTGTAGTATGGTTT
GCAGGGTGGATGTTTGCTTTATTATCCCTTTGTTAAGTTTGCAATTCTGAATTGTCCAGT
CATGCATCTGAATATAATTGAATTCTTTATTTGTGTGAAAAAAAAAAAAAAAAAAAAAAA
AA
clustalw multiple alignements is not computed in this case