These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1460 fasta sequence [GTACACATCTATCCATCGATCCAGTCCGCCCCGCAGCAGCAGCAGATAGCTAGCTAGCTAGCAAACAATGGCGGCGGATCATGAATTGCGAGCTGCAGCAGTGGTGATGGTGGTGGTGGTGGTGCTGGGCATGGTGTCGACGTCGTCGGCGCACGTGTTCGTGGGGGCGTACAACACGACGTGCCCGAACGCGGAGGACATCGTGTACAAGGAGATGACCAGCATCCTCGCCAAGTCGCCGGAGCTCGCCGGGCCGGTGCTGAGGCTCTTCTCCGTGGACTGCTTCGTGGGCGGCTGCGAGGGGTCCATCCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACTCGCCGCTGAACAAGGGAGTTAAAGGGTACGAGGTGGTGGACGCCATCAAGGCCAAGCTCGACGCCGCC-TGCCCCGGCATCGTCTCCTGCGCCGACACCCTCGCCCTCGCCGCCCGCGACGTCGTGCGCCTAACGAAAGGGCCGTACATCCCACTTCCGACAGGTCGGAGAGATGGCAACAGCTCTAACGCCGCCGATGTGGCCGCCAACTCTCCTGCCCCCGGCGCCACCGTCAACGACCTCCTCACCATCTTCGCCAAGTTCAACTTCACCGCCAAGGATCTTGCCGTCCTCTCAGGTGCGCACACGATCGGCAAGGCCCACTGCTCCGCCTTCTCCACCCGCCTCTACAGCAACTCCTCCTCCAACGGCGGCCCCACGCTGGACGCCAACTACACGACGGCGCTCCGCGGGCAGTGCAAGGTCGGCGACGTGGACACCCTCGTCGACCTCGACCCCCCAACCCCGACCACCTTCGACACCGACTACTACAAGCAGGTGGCCGCGCAGCGGGGCCTCCTCGCCACCGACGCCGCGCTTCTCCTCAACGCCGACACCAAGGCCTACGTCCTCCGCCAGGCCAACGCCACCTCCGACGACGAGTTCTTCGCCGACTTCATCGTCTCCTTCGTCAACATGAGCAAGATCGGCGTGCTCACCCACTCCCACGGCGAGATCAGGCACAAGTGCTCTGCTGTCAACCCGCCGTCGCCGCCGTCCTCCGCCGCCGCCTCCATGCTCGCCACCTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGGGTCCT-CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGA-TTTGTTGTGAATAAAAAAAA] [+] EMBL AK108824 [GTACACATCTATCCATCGATCCAGTCCGCCCCGCAGCAGCAGCAGATAGCTAGCTAGCTAGCAAACAATGGCGGCGGATCATGAATTGCGAGCTGCAGCAGTGGTGATGGTGGTGGTGGTGGTGCTGGGCATGGTGTCGACGTCGTCGGCGCACGTGTTCGTGGGGGCGTACAACACGACGTGCCCGAACGCGGAGGACATCGTGTACAAGGAGATGACCAGCATCCTCGCCAAGTCGCCGGAGCTCGCCGGGCCGGTGCTGAGGCTCTTCTCCGTGGACTGCTTCGTGGGCGGCTGCGAGGGGTCCATCCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACTCGCCGCTGAACAAGGGAGTGAAAGGGTACGAGGTGGTGGACGCCATCAAGGCCAAGCTCGACGCCGCC TGCCCCGGCATCGTCTCCTGCGCCGACACCCTCGCCCTCGCCGCCCGCGACGTCGTGCGCCTAACGAAAGGGCCGTACATCCCACTTCCGACAGGTCGGAGAGATGGCAACAGCTCTAACGCCGCCGATGTGGCCGCCAACTCTCCTGCCCCCGGCGCCACCGTCAACGACCTCCTCACCATCTTCGCCAAGTTCAACTTCACCGCCAAGGATCTTGCCGTCCTCTCAGGTGCGCACACGATCGGCAAGGCCCACTGCTCCGCCTTCTCCACCCGCCTCTACAGCAACTCCTCCTCCAACGGCGGCCCCACGCTGGACGCCAACTACACGACGGCGCTCCGCGGGCAGTGCAAGGTCGGCGACGTGGACACCCTCGTCGACCTCGACCCCCCAACCCCGACCACCTTCGACACCGACTACTACAAGCAGGTGGCCGCGCAGCGGGGCCTCCTCGCCACCGACGCCGCGCTTCTCCTCAACGCCGACACCAAGGCCTACGTCCTCCGCCAGGCCAACGCCACCTCCGACGACGAGTTCTTCGCCGACTTCATCGTCTCCTTCGTCAACATGAGCAAGATCGGCGTGCTCACCCACTCCCACGGCGAGATCAGGCACAAGTGCTCTGCTGTCAACCCGCCGTCGCCGCCGTCCTCCGCCGCCGCCTCCATGCTCGCCACCTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGGGTCCT CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGA TT ] [+] EMBL OSR17441A [ ATCTATCCATCGATCCAGTCCGCCCCGCAGCAGCAGCAGATAGCTAGCTAGCTAGCAAACAATGGCGGCGGATCATGAATTGCGAGCTGCAGCAGTGGTGATGGTGGTGGTGGTGGTGCTGGGCATGGTGTCGACGTCGTCGGCGCACGTNTTCGTGGGGGCGTACAACACGACGTGCCCNAACGCGGAGGACATCGTGTACAAGGAGATGACCAGCATCCTCGCCAAGTCGCCGGAGCTCGCCGGGCCGGTGCTGAGGCTCTTCTCCGTGGACTGCTTCGTGGGCGGCTGCNAGGGGTCCATCCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAA ] [+] EMBL OSR15572A [ CGGATCATGAATTGCGAGCTGCAGCAGTGGTGATGGTGGTGGTGGTGGTGCTGGGCATGGTGTCGACGTCGTCGGCGCACGTTTTCGTGGGGGCGTACAACACGACGTGCCCGAACGCGGAGGACATCGTGTACAAGGAGATGACCAGCATNCTCGCCAAGTCGCCGGAGCTCGCCGGGCCGGTGCTGAGGCTCTTCTCCGTGGACTGCTTCGTGGGCGGCTGCGAGGGGTCCATCCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACTCGCCGCTGAACAAGGGAGTTAAAGGGTACGAGGTGGTGGACGCCATCAAGGCCAAGCTC ] [+] EMBL OSR21601A [ GGGGCGTACAACACGACGTGCCCGAACGCGGAGGACATCGTGTACAAGGAGATGACCAGCATCCTCGCCAAGTCGCCGGAGCTCGCCGGGCCGGTGCTGAGGCTCTTCTCCGTGGACTGCTTCGTGGGCGGCTGCGAGGGGTCCATCCTGCTGGACTCGACGCCGGGGAACAAGGCGGAGAAGGACTCGCCGCTGAACAAGGGAGTTAAAGGGTACGAGGTGGTGGACGCCATCAAGGCCAAGCTCGACGCCGCCTTGCCCC ] [+] EMBL AU083492 [ CACGGCGAGATCAGGCACAAGTGCTCTGCTGTCAACCCGCCGTCGCCGCCGTCCTCCGCCGCCGCCTCCATGCTCGCCACCTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGGGTCCTCCGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGA TTTGTTGTGAATAAAAAAAA] [+] EMBL C20485 [ CCCGCGGTCGCCGCNGTCTTCCGCCGCCGCTTCCATGNTCGCCACTTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGGGTCCT CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAANGNATCGTGA T ] [+] EMBL CF290978 [ TCCTCCGCCGCCGCCTCCATGCTCGCCACCTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGAGTCCC CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGANTTTGTTGTGAATAAAAAAA ] [-] EMBL CF290979 [ CCTCCGCCGCCGCCTCCATGCTCGCCACCTCGCTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGAGTCCC CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGA TTTGTTGTGAATAAAAAAAA] [+] EMBL C20495 [ tTCCGCCGCNGCTTCCATGTTCGCCACTTCGNTCGCCGGCTCGCTTCTCTTCCTCCTCGCGGGGGTCCT CGTGCTGCTCTTCTGATCGATCCATCGATCGATCTCACACATTTTACATGCATGCGTGCGTGCAAATTGGACAAACTGTTGTACTGATTGTTCGTACGTCGTTTCGTCGTCATTTCTGGATTTGTTTTACAAAAACCAATGATTTTTCCTTGATTTTCTTTTAATTTGTCATGTGTGCAGGGTTATAACCCTTGTTTGTTTACTTAATTTCCAAAGGGACAAATTTGTATCTTGGGAGATGAAATCTCCGATTGTTGTAACTGTGGCCGGACGGACGTCAATCAAGGGCCAAATGAATCGTGA T ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||