|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1600 fasta sequence
[CCGCGCTCCACGACCTCTCCCTCCGCCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTACTTCATCGAGAAAACTATGACTGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGGTATGCTATTGACTTGTCACCAAATTGAACTGTTCCTTGTATTTGTATATTTACCATTTTTATTCCATCTGAAGGATAAATGCTTTATCTTTCATGTTGTTTTTGAAATGTTTGAAACTCTGAATTGCATGAATTTTAGAGGATTTTTGCAGTAATTTTGCATAAATAGTTCAATTCCCATGGGCAAGTGGTCCTATTGTGGCCTAACTGAATAGAAACACTCAGGATGCCAACATTGACAGGTTCACTTTTACTTGAGTAACTTTTGTTATTCATTCCATGCAAGGTAGAAATGGTTTGATGGCATGAAATTAATAGGAAAACAAAATTATATTTCCATCCATGTATGCTCTGAACATGCAAGTCTTTTGATTGGTTCATCCTATCTGGTCACCAGATTCTTCTCATGCTTTACTTATACTGGTATACCAATATCATTTTGGGATTCGTATAAACCAGTTCTGTGCCACCAGATCACCACCCACCACCAGACTAGCCTTGCAGACTGTCACTGGCCAAGTTGGATGCCGAAATGGAATTCAGTGCCTAACACAATTAATTAGTGTTAGCCTTTCTGATTATATTATCATTAGTATTTGCATAAAGATATCAATGCAACCCACTAGGCATCACAAGAAACACACAAATGGTTTGAAGGTTCATTTACCAAAAGTCAAAATTTCTTATTGCCAAATGTCAAGGCTATTATAGGTACATGTTTGGTCAATTCTAGCATGTAAAATACTGGAATGTGCTATGATATGGTGGAAGGTAGCATAAACTTCCTACTTTGTGGGACACATGACTATATTAACATATTTGCTTCTCTTGTCTGCCGATGCTTTATTTTGTGACGATTTCTTTAAGACATTAAGTAGGTTGTCTCTATGGTTAGTAACAGGATTATCCTGTAACATATGAACATTCTACATTTACTTGCAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTTGATGAAAAAAAAAAAA]
[+] EMBL AK102742 [CCGCGCTCCACGACCTCTCCCTCCGCCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTACTTCATCGAGAAAACTATGACTGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGGTATGCTATTGACTTGTCACCAAATTGAACTGTTCCTTGTATTTGTATATTTACCATTTTTATTCCATCTGAAGGATAAATGCTTTATCTTTCATGTTGTTTTTGAAATGTTTGAAACTCTGAATTGCATGAATTTTAGAGGATTTTTGCAGTAATTTTGCATAAATAGTTCAATTCCCATGGGCAAGTGGTCCTATTGTGGCCTAACTGAATAGAAACACTCAGGATGCCAACATTGACAGGTTCACTTTTACTTGAGTAACTTTTGTTATTCATTCCATGCAAGGTAGAAATGGTTTGATGGCATGAAATTAATAGGAAAACAAAATTATATTTCCATCCATGTATGCTCTGAACATGCAAGTCTTTTGATTGGTTCATCCTATCTGGTCACCAGATTCTTCTCATGCTTTACTTATACTGGTATACCAATATCATTTTGGGATTCGTATAAACCAGTTCTGTGCCACCAGATCACCACCCACCACCAGACTAGCCTTGCAGACTGTCACTGGCCAAGTTGGATGCCGAAATGGAATTCAGTGCCTAACACAATTAATTAGTGTTAGCCTTTCTGATTATATTATCATTAGTATTTGCATAAAGATATCAATGCAACCCACTAGGCATCACAAGAAACACACAAATGGTTTGAAGGTTCATTTACCAAAAGTCAAAATTTCTTATTGCCAAATGTCAAGGCTATTATAGGTACATGTTTGGTCAATTCTAGCATGTAAAATACTGGAATGTGCTATGATATGGTGGAAGGTAGCATAAACTTCCTACTTTGTGGGACACATGACTATATTAACATATTTGCTTCTCTTGTCTGCCGATGCTTTATTTTGTGACGATTTCTTTAAGACATTAAGTAGGTTGTCTCTATGGTTAGTAACAGGATTATCCTGTAACATATGAACATTCTACATTTACTTGCAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTT ]
[+] EMBL AU097364 [ GTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTTGATGAAAAAAAAAAAA]
consensusID : consensus_11860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 940 fasta sequence
[GCCGCCGCTTTCTCCCCTAAAGTCTACTAGTCCTCCTCGTCCTCTCCACCCTCCTCGGCGGCGGCGGCGGCAGCAGCGGCGCTTGAAGCTCGGGCTATGGCGAGCCCGCCGAGGATCGAGGTGGAGAAGCTGAGCGTGGAGCAGCTGAAGGCCCTCAAGGAGCAGACGGATCTGGAGGTGAACCTCCTCCAGGACAGCCTCACCAAGATCCGCTCCGCCGCCACCCGCCTCGAGAACGCCTCCGCCGCGCTCCACGACCTCTCCCTCCG-CCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTAC-TTCATCGAGAAAACTATGAC-TGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGAT-GGCCAGGTTG-AGTAGTTTGT-GGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCT-GGTCGTGTGTCTGTGCAAAGGCAACCGGTTCAC-TTCCAT-GGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTGATGAACTGACCTTGTTGGGNCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK064048 [GCCGCCGCTTTCTCCCCTAAAGTCTACTAGTCCTCCTCGTCCTCTCCACCCTCCTCGGCGGCGGCGGCGGCAGCAGCGGCGCTTGAAGCTCGGGCTATGGCGAGCCCGCCGAGGATCGAGGTGGAGAAGCTGAGCGTGGAGCAGCTGAAGGCCCTCAAGGAGCAGACGGATCTGGAGGTGAACCTCCTCCAGGACAGCCTCACCAAGATCCGCTCCGCCGCCACCCGCCTCGAGAACGCCTCCGCCGCGCTCCACGACCTCTCCCTCCG CCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTAC TTCATCGAGAAAACTATGAC TGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGAT GGCCAGGTTG AGTAGTTTGT GGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCT GGTCGTGTGTCTGTGCAAAGGCAACCGGTTCAC TTCCAT GGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTGATGAACTGACCTTG ]
[+] EMBL AU162780 [ CTCTCCACCCTCCTCGGCGGCGGCGGCGGCAGCAGCGGCGCTTGAAGCTCGGGCTATGGCGAGCCCGCCGAGGATCGAGGTGGAGAAGCTGAGCGTGGAGCAGCTGAAGGCCCTCAAGGAGCAGACGGATCTGGAGGTGAACCTCCTCCAGGACAGCCTCACCAAGATCCGCTCCGCCGCCACCCGCCTCGAGAACGCCTCCGCCGCGCTCCACGACCTCTCCCTCCG CCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTAC TTCATCGAGAAAACTATGAC TGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGGCCAGGTTG AGTAGTTTGT GGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCT GGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTTCCATGGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAAC ]
[+] EMBL OSS4206A [ TCCACCCTCCTCGGCGGCGGCGGCGGCA CAGCGGCGCTTGAAGCTCGGGCTATGGCGAGCCCGCCGAGGATCGAGGTGGAGAAGCTGAGCGTGGAGCAGCTGAAGGCCCTCAAGGAGCAGACGGATCTGGAGGTGAACCTCCTCCAGGACAGCCTCACCAAGATCCGCTCCGCCGCCACCCGCCTCGAGAACGCCTCCGCCGCGCTCCACGACCTCTCCCTCCG CCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACGTGCCCGGCA GNTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTACTTTCATCGAGAAAACTATGACTTGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTTCTGAAGTCTAATTTTGATGAACTAGTTGAGATGG TACGAAGGAGGAAAACATAGCCGACGGAATNGGTCGGTTTNTA ]
[+] EMBL AU057768 [ ACGCCTCCGCCGCGTTCCACGACTTCTCCCTCCGCCCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGGCGTCGCTGTACTTNCCCGGCACGCTGGACGACTCCGAGAAGGTGCCCGTCGACGTCGGCACCGGCTAC TTCATCGAGAAAACTATGAC TGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGAT GGCCAGGTTG AGTAGTTTGT GGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCT GGTCGTGTGTCTGTGCAAAGGCAACCGGTTCAC TTCCAT GGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTGATGAACTGACCTTGTTGGGNCTGTAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU095088 [ GTCGNCGTCGGCACCGGCTAC TTCATCGAGAAAACTATGAC TGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTANGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGNTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACNTCCTGTCTCCACCTTGTTAGAT GGCCANGTTG AGTAGTTTGTGGGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGGTCGAGTGTCTGTn ]
[+] EMBL AU058434 [ aAT GGCCAGGTTGAAGTAGTTTGT GGCATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCT GGTCGTGTGTCTGTGCAAAGGCAACCGGTTCAC TTCCAT GGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTAGCCATCTTTCTATGTGATGAACTGACCTTGTTGGNNNTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[GATAAGGCCGAGACAAGGCGAAGAAAATGCTCGGACCGCTCCAGGGTTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAAAAGGTGCTCGTCGCCGTCGGCACGGGCTACTTCATCGAGAAACCTATGCCTGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGGTTCTACAAGCCAAGCTGAGGCAGTTATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGGATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGATAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTACCCATCTTTCTATGTGATGAACTGACCTTGTTGGGACTGTAAAAAAAAAAAAA]
[-] EMBL CA759222 [GATAAGGCCGAGACAAGGCGAAGAAAATGCTCGGACCGCTCCAGGGTTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAAAAGGTGCTCGTCGCCGTCGGCACGGGCTACTTCATCGAGAAACCTATGCCTGAAGGCAAAGAATACTGTGAAAGGAAAATTAATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTCGGGTTCTACAAGCCAAGCTGAGGCAGTTATCGCCGAGCCCGAGTTCATGAGACCCGACCGCACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGGATCTATCTAGCCAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTCACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAACACGCAAATTTTATTGGCTCAAGTCGCAGATAGCCGAATTGTGATAATCATTTGTGTGGTTGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAGACGATATTTTACCCATCTTTCTATGTGATGAACTGACCTTGTTGGGACTGTAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 CCGCGCTCCACGACCTCTCCCTCCGCCCCAAAGGGAAGAAGATGCTCGTGCCGCTCACGG 60
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 CGTCGCTGTACGTGCCCGGCACGCTGGACGACTCCGAGAAGGTGCTCGTCGACGTCGGCA 120
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 CCGGCTACTTCATCGAGAAAACTATGACTGAAGGCAAAGAATACTGTGAAAGGAAAATTA 180
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 ATTTGCTGAAGTCTAATTTTGATGAACTAGTTGAGGTATGCTATTGACTTGTCACCAAAT 240
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TGAACTGTTCCTTGTATTTGTATATTTACCATTTTTATTCCATCTGAAGGATAAATGCTT 300
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TATCTTTCATGTTGTTTTTGAAATGTTTGAAACTCTGAATTGCATGAATTTTAGAGGATT 360
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TTTGCAGTAATTTTGCATAAATAGTTCAATTCCCATGGGCAAGTGGTCCTATTGTGGCCT 420
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 AACTGAATAGAAACACTCAGGATGCCAACATTGACAGGTTCACTTTTACTTGAGTAACTT 480
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TTGTTATTCATTCCATGCAAGGTAGAAATGGTTTGATGGCATGAAATTAATAGGAAAACA 540
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 AAATTATATTTCCATCCATGTATGCTCTGAACATGCAAGTCTTTTGATTGGTTCATCCTA 600
consensus_11860#1 ------------------------------------------------------------
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TCTGGTCACCAGATTCTTCTCATGCTTTACTTATACTGGTATACCAATATCATTTTGGGA 660
consensus_11860#1 --------------------GCCGCCGCTTTCTCCCCTAAAGTCT-ACTAGTCCTCCTCG 39
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TTCGTATAAACCAGTTCTGTGCCACCAGATCACCACCCACCACCAGACTAGCCTTGCAGA 720
consensus_11860#1 TCCTCTCCACCCTCCTCGGCGGCGGCGGCGGCAGCAGCGGCGCTTGAAGCT-CGGGCTAT 98
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 CTGTCACTGGCCAAGTTGGATGCCGAAATGGAATT--CAGTGCCTAACACAATTAATTAG 778
consensus_11860#1 GGCGAGCCCGCCGAGGATCGAGGTGGAGAAGCTGAGCGTGGAGCAGCTGAAGGCCCTCAA 158
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TGTTAGCCTTTCTGATTATATTATCATTAGTATTTGCATAAAGATATCAATGCAACCCAC 838
consensus_11860#1 GGAGCAGACGGATCTGGAGGTGAACCTCCTCCAGGACAGCCTCACCAAGATCCGC-TCCG 217
consensus_11860#2 ------------------------------------------------------------
consensus_11860#0 TAGGCATCACAAGAAACACACAAATGGTTTGAAGGTTCATTTACCAAAAGTCAAAATTTC 898
consensus_11860#1 CCGCCACCCGCC-TCGAGAACGCCTCCGCCGCGCTCCACGACCTCTCCCTCCGCCCCAAA 276
consensus_11860#2 -------------------------------------------GATAAGGCCGAGACAAG 17
consensus_11860#0 TTATTGCCAAATGTCAAGGCTATTATAGGTACA-TGTTTGGTCAATTCTAGCATGTAAAA 957
* * **
consensus_11860#1 GGGAAGAAGATGCTC--GTGCCGCTCACGGCGTCGCTG--TACGTGCCCGGCACGCTGGA 332
consensus_11860#2 GCGAAGAAAATGCTC--GGACCGCTCCAGGGTTCGCTG--TACGTGCCCGGCACGCTGGA 73
consensus_11860#0 TACTGGAATGTGCTATGATATGGTGGAAGGTAGCATAAACTTCCTACTTTGTGGGACACA 1017
*** **** * ** * * * * * * * *
consensus_11860#1 CGACTCCGAGAAGGTGCTCGTCGACGTCGGCACCGGCTACTTCATCGAGAAAACTATGAC 392
consensus_11860#2 CGACTCCGAAAAGGTGCTCGTCGCCGTCGGCACGGGCTACTTCATCGAGAAACCTATGCC 133
consensus_11860#0 TGACTATATTAACATATTTGCTTCTCTTGTCTGCCGATGCTTTATTTTGTGACGATTTCT 1077
**** ** * * * * * * * * *** ** * * *
consensus_11860#1 TGAAGGCA--AAGAATACTGT----------GAAAGGAAAATTAATTTGCTGAAGTCTAA 440
consensus_11860#2 TGAAGGCA--AAGAATACTGT----------GAAAGGAAAATTAATTTGCTGAAGTCTAA 181
consensus_11860#0 TTAAGACATTAAGTAGGTTGTCTCTATGGTTAGTAACAGGATTATCCTGTAACATATGAA 1137
* *** ** *** * *** * * **** ** * **
consensus_11860#1 TTTTGATGAACTAGTTG-AGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTC 499
consensus_11860#2 TTTTGATGAACTAGTTG-AGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTC 240
consensus_11860#0 CATTCTACATTTACTTGCAGATGGCTACGAAGAAGAAAAACATAGCCGACGAAATGGGTC 1197
** * ** *** ******************************************
consensus_11860#1 GGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCG 559
consensus_11860#2 GGGTTCTACAAGCCAAGCTGAGGCAGTTATCGCCGAGCCCGAGTTCATGAGACCCGACCG 300
consensus_11860#0 GGCTTCTACAAGCCAAGCTGAGGCAGTCATCGCCGAGCCCGAGTTCATGAGACCCGACCG 1257
** ************************ ********************************
consensus_11860#1 CACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGCATCTATCTAGC 619
consensus_11860#2 CACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGGATCTATCTAGC 360
consensus_11860#0 CACCTCCTGTCTCCACCTTGTTAGATGGCCAGGTTGAGTAGTTTGTGGCATCTATCTAGC 1317
************************************************ ***********
consensus_11860#1 CAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTC 679
consensus_11860#2 CAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTC 420
consensus_11860#0 CAACATAGAAAATTTTTAGCTGCTGCTCTGGTCGTGTGTCTGTGCAAAGGCAACCGGTTC 1377
************************************************************
consensus_11860#1 ACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAA 739
consensus_11860#2 ACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAA 480
consensus_11860#0 ACTTCCATGGTTTACTGAAAGAACCTGCCTCATCAGGTTAGCCCAGAAGCCGGTGTTGAA 1437
************************************************************
consensus_11860#1 CACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGT 799
consensus_11860#2 CACGCAAATTTTATTGGCTCAAGTCGCAGATAGCCGAATTGTGATAATCATTTGTGTGGT 540
consensus_11860#0 CACGCAAATTTTATTGGCTCAAGTCGCAGGTAGCCGAATTGTGATAATCATTTGTGTGGT 1497
***************************** ******************************
consensus_11860#1 TGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAG 859
consensus_11860#2 TGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAG 600
consensus_11860#0 TGTTAAATCAGAATGGCTGATTTCATTAGACATTTTGCTGCTGTTCCCTGTTTCTGGAAG 1557
************************************************************
consensus_11860#1 ACGATATTTTAGCCATCTTTCTATGTGATGAACTGACCTTGTTGGGNCTGTAAAAAAAAA 919
consensus_11860#2 ACGATATTTTACCCATCTTTCTATGTGATGAACTGACCTTGTTGGGACTGTAAAAAAAAA 660
consensus_11860#0 ACGATATTTTAGCCATCTTTCTATGT-------TGA------------TGAAAAAAAAAA 1598
*********** ************** *** ** *********
consensus_11860#1 AAAAAAAAAAAAAAAAAAAAA 940
consensus_11860#2 AAAA----------------- 664
consensus_11860#0 AA------------------- 1600
**
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||