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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11869#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1486 fasta sequence
[ACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTCTCTCACGCGCCTCCGCGTCGCCGCATTCGGGGACGCCCACCGCCGCCGGATCCGGCCAGCCTTCCCCCCTCCCCTCCTTTCCCCGGCCGCTCCCCTNCTCGGTAAGATCCGGCGCCGGTTCCATGTCGAGCACCGGCGAGCAGTCGCAGGCGAAGGCGGAGGCCGAGGAGGCGGTGGAGCTCGTGCTGTTCCAGGTCGCTGAGTGCTACGTCTANCTGATACCTNCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTC-ACAAGTGGGC-TTGGGAAGGGACTTTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAGAGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCGTGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGAAAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAAGAAAAAGACTGCTGAAGAGATGGTACAACACTATGAGAAATCATCATCAGTGGATTACAGCCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATGTTGGTCTGGTGGGCTAAGAAACCGGCGGTTGAACCGGGATTTTCCCTTGTCAGCTATTTTAACGGTCCCATTGGCCAGAACAGCCTGGCCCAGGTACCAGGTCCAGTTTTTTCTGGCTGGGATTTTCTGATGTTTGGCCTTATTCTTTCTCCAATTCCCTAGAAAGAGTCCGGCGCAAAGATAAAATCTGCATTTTTTGAGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCCAGTTTCCCTCAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGA-GTTTCCTTCCC-AAGACCAACCAGCTGCTGATACTGG-AGCTG-ATACCACT-CCTTTCAAAGC-AGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGAT-AACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATACANNATAAAAAAAAAAAA]
[+] EMBL C26436 [ACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTCTCTCACGCGCCTCCGCGTCGCCGCATTCGGGGACGCCCACCGCCGCCGGATCCGGCCAGCCTTCCCCCCTCCCCTCCTTTCCCCGGCCGCTCCCCTNCTCGGTAAGATCCGGCGCCGGTTCCATGTCGAGCACCGGCGAGCAGTCGCAGGCGAAGGCGGAGGCCGAGGAGGCGGTGGAGCTCGTGCTGTTCCAGGTCGCTGAGTGCTACGTCTANCTGATACCTNCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTC ACAAGTGGGCTTTGGGAAGGGACTT ]
[+] EMBL AK103190 [ TCTCTCTCTCTCTCTCTCTCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTCTCTCACGCGCCTCCGCGTCGCCGCATTCGGGGACGCCCACCGCCGCCGGATCCGGCCAGCCTTCCCCCCTCCCCTCCTTTCCCCGGCCGCTCCCCTCCTCGGTAAGATCCGGCGCCGGTTCCATGTCGAGCACCGGCGAGCAGTCGCAGGCGAAGGCGGAGGCCGAGGAGGCGGTGGAGCTCGTGCTGTTCCAGGTCGCTGAGTGCTACGTCTACCTGATACCTCCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTCAACAAGTGGGC TTGGGAAGGGACTCTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAGAGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCGTGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGAAAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAAGAAAAAGACTGCTGAAGAGATGGTACAACACTATGAGAAATCATCATCAGTGGATTACAGCCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATGTTGGTCTGGTGGGCTAAGAAACCGGCGGTTGAACCGGGATTTTCCCTTGTCAGCTATTTTAACGGTCCCATTGGCCAGAACAGCCTGGCCCAGGTACCAGGTCCAGTTTTTTCTGGCTGGGATTTTCTGATGTTTGGCCTTATTCTTTCTCCAATTCCCTAGAAAGAGTCCGGCGCAAAGATAAAATCTGCATTTTTTGAGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCCAGTTTCCCTCAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGA GTTTCCTTCCC AAGACCAACCAGCTGCTGATACTGG AGCTG ATACCACT CCTTTCAAAGC AGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGAT AACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAAC ]
[+] EMBL AU082913 [ CCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGA GTTTCCTTCCC AAGACCAACCAGCTGCTGATACTGG AGCTG ATACCACT CCTTTCAAAGC AGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGAT AACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATACANNATAAAAAAAA ]
[+] EMBL AU173119 [ AAGCGGAGGTTTCTTTCCCAAAGACCAACCAGCTGNTAAT CTGGAAGCTGAATCCCACTCCCTTTCAAAGCAAAAATTTCTTTTTTTTCATGAACAACCAGCCGCGGATAAACGTGGTTTNTTCCCCCCCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATNTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATCCAAAAAAAAAAAAAAAAA]
consensusID : consensus_11869#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1332 fasta sequence
[TCTCCCCTCTTCGGCACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTCTCTCACGCGCCTCCGCGTCGCCGCATTCGGGGACGCCCACCGCCGCCGGATCCGGCCAGCCTTCCCCCCTCCCCTCCTTTCCCCGGCCGCTCCCCTCCTCGGTAAGATCCGGCGCCGGTTCCATGTCGAGCACCGGCGAGCAGTCGCAGGCGAAGGCGGAGGCCGAGGAGGCGGTGGAGCTCGTGCTGTTCCAGGTCGCTGAGTGCTACGTCTACCTGATACCTCCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTCAACAAGTGGGCTTGGGAAGGGACTCTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAGAGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCGTGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGAAAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAAGAAAAAGACTGCTGAAGAGATGGTACAACACTATGAG--AAATCATCATCAGTGGATT-ACAGCCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATAAAGAGTCCGGCGCAAAGATAAAATCTGCATTTTTTGAGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCCAGTTTCCCTNAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGCTGCTGATACTGGAGCTGATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGATAACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATAAAAAAAAAAAA]
[+] EMBL AK106098 [TCTCCCCTCTTCGGCACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTCTCTCACGCGCCTCCGCGTCGCCGCATTCGGGGACGCCCACCGCCGCCGGATCCGGCCAGCCTTCCCCCCTCCCCTCCTTTCCCCGGCCGCTCCCCTCCTCGGTAAGATCCGGCGCCGGTTCCATGTCGAGCACCGGCGAGCAGTCGCAGGCGAAGGCGGAGGCCGAGGAGGCGGTGGAGCTCGTGCTGTTCCAGGTCGCTGAGTGCTACGTCTACCTGATACCTCCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTCAACAAGTGGGCTTGGGAAGGGACTCTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAGAGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCGTGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGAAAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAAGAAAAAGACTGCTGAAGAGATGGTACAACACTATGAG AAATCATCATCAGTGGATT ACAGCCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATAAAGAGTCCGGCGCAAAGATAAAATCTGCATTTTTTGAGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCCAGTTTCCCTCAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGCTGCTGATACTGGAGCTGATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGATAACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAG ]
[+] EMBL AU092308 [ TAACCAGGAAAAAGACTGNTGAAGAGATGGTACAACATTNTGGGGAAAATCATCATNAGTGGATTAACAGCCTCAAAGAGGGGGAAACTTTGGTTTTGCAGCTAAAAAATAAAGAGTCCGGCGNAAAGATAAAATCTGCATTTTTTGAGCAAGGCNTCAACAAGCTTTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCNAGTTTCCCTNAAGCTCCCTCCACTTCNGCCATCACCGGTNTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGCTGCTGATACTGGAGCTGATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGATAACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATAAAAAAAAAAAA]
[+] EMBL OSC30201 [ tncgagAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGCTGCTGATACTGGAGCTGATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGATAACGTCGNTTCTTCCCCACCACCG ]
consensusID : consensus_11869#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[GGTTTTGCAGTTAAAAAATAAAGAGTCCGGCGCAAAAATAAAATTTGCTTTTTTTGAGAAAGGCCTCAACAAGTTTTTTTTTAAGGAAAAAGCCAACTCCAAGGGGGCCCCAGTTTCCTTAAAGTTCCCTCCCCCTCCGCCATTACGGGTTTTTCTTAAAAATTTTGGCATCGGGGTTTTTCCGTTAAAAGGGGAGTTTCTTTCCCAAGACCAACCAGTTGTTGATATTGGAGTTGATACCCCTCCTTTCAAAGAAGAATTTCTTTTTTTTTATGAACACCCACCCGGGGAAAAGGTTGTTTTTTCCCCCCCCCCGAAAGCAAAAGTTGTTCTTCAGGAGCACCCAATTGCAGCAAAAAAGGCCCCTCAAAAGAGGGTGGACGACGATTTGGGAGATTTTCAGGCAGGGGGGTGAATCATGTTTTTTGTACAACCCCCATGTTACTCAAATTGCTCCTTTGATTTTCCAGGTTCCATCAGTTGTGACTTTTGCCGGCACATAAGTTTTTGTCCAGTACAAAAAGTTAGTAACTTTTTTGTTATAATTTATAAAAGAACAGAGGGAAACCCAAAAACCCTCCTTT]
[-] EMBL BI305960 [GGTTTTGCAGTTAAAAAATAAAGAGTCCGGCGCAAAAATAAAATTTGCTTTTTTTGAGAAAGGCCTCAACAAGTTTTTTTTTAAGGAAAAAGCCAACTCCAAGGGGGCCCCAGTTTCCTTAAAGTTCCCTCCCCCTCCGCCATTACGGGTTTTTCTTAAAAATTTTGGCATCGGGGTTTTTCCGTTAAAAGGGGAGTTTCTTTCCCAAGACCAACCAGTTGTTGATATTGGAGTTGATACCCCTCCTTTCAAAGAAGAATTTCTTTTTTTTTATGAACACCCACCCGGGGAAAAGGTTGTTTTTTCCCCCCCCCCGAAAGCAAAAGTTGTTCTTCAGGAGCACCCAATTGCAGCAAAAAAGGCCCCTCAAAAGAGGGTGGACGACGATTTGGGAGATTTTCAGGCAGGGGGGTGAATCATGTTTTTTGTACAACCCCCATGTTACTCAAATTGCTCCTTTGATTTTCCAGGTTCCATCAGTTGTGACTTTTGCCGGCACATAAGTTTTTGTCCAGTACAAAAAGTTAGTAACTTTTTTGTTATAATTTATAAAAGAACAGAGGGAAACCCAAAAACCCTCCTTT]
consensusID : consensus_11869#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence
[CCCCCAAGAAAGAAATCCATTTCTTCTTTTCACGCGCCCTTCCGCGNTCGGCCGGANTTCGGGGGAACGGCCCACCGGCCGGCCGGGAATCCGGGCCAGCNTTCCCCCCTTCCCTTCNTTTCCCCGGCCGNTTCCCNTCNTCGGGTAAGAATCCGGGCGGCCGGTTCCATGTCGNAGCACCGGGCGNAGCAGTCGCAGGCAAAGGCGGAGGCCGAGGAGGCGGGGGGAGTTCGTGCTGTTCCAGGTCGTTGAGTGTTACGTNTACCTGATACCTCCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTCAACAAGTGGGGCTTTGGGAAGGGACTNTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTA]
[+] EMBL AU173118 [CCCCCAAGAAAGAAATCCATTTCTTCTTTTCACGCGCCCTTCCGCGNTCGGCCGGANTTCGGGGGAACGGCCCACCGGCCGGCCGGGAATCCGGGCCAGCNTTCCCCCCTTCCCTTCNTTTCCCCGGCCGNTTCCCNTCNTCGGGTAAGAATCCGGGCGGCCGGTTCCATGTCGNAGCACCGGGCGNAGCAGTCGCAGGCAAAGGCGGAGGCCGAGGAGGCGGGGGGAGTTCGTGCTGTTCCAGGTCGTTGAGTGTTACGTNTACCTGATACCTCCCAGGAAGACAGCCGCCTCCTACAGGGCTGATGAATGGAACGTCAACAAGTGGGGCTTTGGGAAGGGACTNTCAAGGTTGTCAGCAAAGGAGAAGAGTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11869#0 ------------------------------------------------------------
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 -----------------------------------------------TCTCCCCTCTTCG 13
consensus_11869#2 GGTTTTGCAGTTAAAAAATAAAGAGTCCGGCGCAAAAATAAAATTTGCTTTTTTTGAGAA 60
consensus_11869#0 --ACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTC 58
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 GCACTTCCCTTCCCCACCTTCCTCCTCTCCCACCGCTCTCTCTCTCTCTCTCTCTCTCTC 73
consensus_11869#2 AGGCCTCAACAAGTTTTTTTTTAAGGAAAAAGCCAACTCCAAGGGGGCCCCAGTTTCCTT 120
consensus_11869#0 TCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTC--TCTCACGC----GCC-- 110
consensus_11869#3 ----------------CCCCCAAGAAAGAAATCCATTTCTTCTTTTCACGC----GCCCT 40
consensus_11869#1 TCTCTCAGTCTCTCTCCCCCCCAAGAAGAAATCCATTCCTC--TCTCACGC----GCC-- 125
consensus_11869#2 AAAGTTCCCTCCCCCTCCGCCATTACGGGTTTTTCTTAAAAATTTTGGCATCGGGGTTTT 180
** ** * * ** * * * *
consensus_11869#0 TCCGCGTC--GCCGCATTC---GGGGACG-CCCACCGCC--GCCGG--ATCCGG-CCAGC 159
consensus_11869#3 TCCGCGNTCGGCCGGANTTCGGGGGAACGGCCCACCGGCCGGCCGGGAATCCGGGCCAGC 100
consensus_11869#1 TCCGCGTC--GCCGCATTC---GGGGACG-CCCACCGCC--GCCGG--ATCCGG-CCAGC 174
consensus_11869#2 TCCGTTAAAAGGGGAGTTTCTTTCCCAAGACCAACCAGTT-GTTGAT-ATTGGAGTTGAT 238
**** * * * * * ** *** * * ** *
consensus_11869#0 CTTCCCCCCTCCC--------CT-CCTTTCCCCGGCCGCTCCCCTNCTC--GGTAAGA-- 206
consensus_11869#3 NTTCCCCCCTTCC--------CTTCNTTTCCCCGGCCGNTTCCCNTCNTCGGGTAAGAA- 151
consensus_11869#1 CTTCCCCCCTCCC--------CT-CCTTTCCCCGGCCGCTCCCCTCCTC--GGTAAGA-- 221
consensus_11869#2 ACCCCTCCTTTCAAAGAAGAATTTCTTTTTTTTTATGAACACCCACCCGGGGAAAAGGTT 298
** ** * * * * *** *** * * ***
consensus_11869#0 ------TCCGGC--GCCGGTTCCAT--GTCGA-GCACCGGC--GAGCAGTCGCAGGCGAA 253
consensus_11869#3 ------TCCGGGCGGCCGGTTCCAT--GTCGNAGCACCGGGCGNAGCAGTCGCAGGCAAA 203
consensus_11869#1 ------TCCGGC--GCCGGTTCCAT--GTCGA-GCACCGGC--GAGCAGTCGCAGGCGAA 268
consensus_11869#2 GTTTTTTCCCCCCCCCCGAAAGCAAAAGTTGTTCTTCAGGAGCACCCAATTGCAG-CAAA 357
*** *** ** ** * * ** ** * **** * **
consensus_11869#0 GGCGGAGGCCGAGGAGGCGGTGG------AGCTCGTGCTGTTCCAGGTCGCTGAGTG--C 305
consensus_11869#3 GGCGGAGGCCGAGGAGGCGGGGGG-----AGTTCGTGCTGTTCCAGGTCGTTGAGTG--T 256
consensus_11869#1 GGCGGAGGCCGAGGAGGCGGTGG------AGCTCGTGCTGTTCCAGGTCGCTGAGTG--C 320
consensus_11869#2 AAAGGCCCCTCAAAAGAGGGTGGACGACGATTTGGGAGATTTTCAGGCAGGGGGGTGAAT 417
** * * ** ** ** * * * ** **** * * ***
consensus_11869#0 TACGTCTANCTGATACCTNCCAGGA-AGACAGCCGCCTCCTACAGGGCTGATGAATGGAA 364
consensus_11869#3 TACGTNTACCTGATACCTCCCAGGA-AGACAGCCGCCTCCTACAGGGCTGATGAATGGAA 315
consensus_11869#1 TACGTCTACCTGATACCTCCCAGGA-AGACAGCCGCCTCCTACAGGGCTGATGAATGGAA 379
consensus_11869#2 CATGTTTTTTGTACAACCCCCATGTTACTCAAATTGCTCCT------TTGATTTTCCAGG 471
* ** * * * * *** * * ** ***** ****
consensus_11869#0 CGTCA-CAAGTGGG--CTT----GGGAAGGGACTTTCAAGGTTGTCAGCAAAGGAGAAGA 417
consensus_11869#3 CGTCAACAAGTGGGGCTTT----GGGAAGGGACTNTCAAGGTTGTCAGCAAAGGAGAAGA 371
consensus_11869#1 CGTCAACAAGTGGG--CTT----GGGAAGGGACTCTCAAGGTTGTCAGCAAAGGAGAAGA 433
consensus_11869#2 TTCCATCAGTTGTGACTTTTGCCGGCACATAAGTTTTTGTCCAGTACAAAAAGTTAGTAA 531
** ** ** * ** ** * * * * ** **** *
consensus_11869#0 GTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAG 477
consensus_11869#3 GTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTA------------- 418
consensus_11869#1 GTGCATCATCAAACTGGAAGATAAGAACACAGGGGAGCTGTACGCTAGGGCATTCCTCAG 493
consensus_11869#2 CTTTTTTGTTATAATTTATAA-AAGAACAGAGGGAAACCCAAAAACCCTCCTTT------ 584
* * * * * * * * ******* **** * * *
consensus_11869#0 AGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCG 537
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 AGAAGACGAACCACATCCGGTGGAACCTGTTATTGATAGCAGCAGATATTTTGTACTCCG 553
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGA 597
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 TGTTGAAGAGAATATAGATGGACGTCAGCGCCATGCCTTTATTGGTTTAGGCTTCCGTGA 613
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 AAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAA 657
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 AAGACCTCAAGCATATGATTTCCAAGCTGCTCTGCACGACCATATGAAATATCTAAACAA 673
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 GAAAAAGACTGCTGAAGAGATGGTACAACACTATGAGAAATCATCATCAGTGGATTACAG 717
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 GAAAAAGACTGCTGAAGAGATGGTACAACACTATGAGAAATCATCATCAGTGGATTACAG 733
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 CCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATGTTGGTCTGGTGGGCTAAGA 777
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 CCTCAAAGAAGGGGAAACTTTGGTTTTGCAGCTAAAAAATAAAGAGTCCGGCGCAAAGAT 793
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 AACCGGCGGTTGAACCGGGATTTTCCCTTGTCAGCTATTTTAACGGTCCCATTGGCCAGA 837
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 AAAATCTGCATTTTTTGAGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTC 853
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 ACAGCCTGGCCCAGGTACCAGGTCCAGTTTTTTCTGGCTGGGATTTTCTGATGTTTGGCC 897
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 CAAGGAGGCCCCAGTTTCCCTNAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTAC 913
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TTATTCTTTCTCCAATTCCCTAGAAAGAGTCCGGCGCAAAGATAAAATCTGCATTTTTTG 957
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 AGATTCTGGCATCGCGGCTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGC 973
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 AGCAAGGCCTCAACAAGCTCTCATTTAACGAAAAAGCCAACTCCAAGGAGGCCCCAGTTT 1017
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 TGCTGATACTGGAGCTGATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACA 1033
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 CCCTCAAGCTCCCTCCACCTCCGCCATCACCGGTCTCTCCTACAGATTCTGGCATCGCGG 1077
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 ACCAGCCGCGGATAACGTCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGA 1093
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 CTTCTCCGTTCAAAGCGGAGTTTCCTTCCCAAGACCAACCAGCTGCTGATACTGGAGCTG 1137
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 GCAACCAACTGCAGCAGAGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTT 1153
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 ATACCACTCCTTTCAAAGCAGAATTTCCTTCTTCTCATGAACAACCAGCCGCGGATAACG 1197
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 TCAGGCAGCTGGGTGAATCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTT 1213
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TCGCTTCTTCCCCACCACCGAAAGCAGAAGCTGCTCCTCAGGAGCAACCAACTGCAGCAG 1257
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 TGATTTTCCATGTTCCATCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACA 1273
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 AGAAGGCCCCTCAAGAGAGCGTGGACGACGACTTCGGAGACTTTCAGGCAGCTGGGTGAA 1317
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 GAGAGCTAGTAACTATCTTGTTATAATCTATAAAAGAACAGATGGATAAAAAAAAAAAA- 1332
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TCATGTATCTTGTACATACCACATGTTACTCAAATTGCTCCTTTGATTTTCCATGTTCCA 1377
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 ------------------------------------------------------------
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TCAGTTGTGACTTCTGCCGGCACATGAGTTGCTGTACAGTACAGAGAGCTAGTAACTATC 1437
consensus_11869#3 ------------------------------------------------------------
consensus_11869#1 ------------------------------------------------------------
consensus_11869#2 ------------------------------------------------------------
consensus_11869#0 TTGTTATAATCTATAAAAGAACAGATGGATACANNATAAAAAAAAAAAA 1486
consensus_11869#3 -------------------------------------------------
consensus_11869#1 -------------------------------------------------
consensus_11869#2 -------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||