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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11871#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2316 fasta sequence
[CGTCTTGACACGCGCCTCCTCCTCGCCTCGCCTCGCCGCCGGTGGCCGCCACCGCCGCCGCCGACGCAGCCGTCGCCATCGCCGCGCCCACCCTGGCTTGGCGGCGAGCCGAGCAACAGGAAGGCGATAAGCACGCGAGGAGGAGCCCATAGCAAAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTTGATCACGCAAGACCGCGGCGTGCGAGGACCTTCCGGGTGCTGTGCTGTGCTGCGCGTGCGGCTGTTTGGGCGGCGGCGCGCGCCTTCGGATGAGATGCGCAGGGGCGGGGTGAAGGCGGCGGCGGCGGCCGAGAAGGCGCGGGAGGCGGCGCGGGCGAAGGTGTGGGCGGCGCGGGCGAGCACCACCGTGGTGCTCTGGCTGTGCTGCGCGCTGCTGCTCGCGACGTCGCGGGAGCTCGGGAGGTGGTCGGGCTGCCTCACCCAGCCGCTGATCGTCGTAGAGCGCCGGTTCGAGGCGGTTGCCGCCGCGGGCAGCGAGAGGGCGGCTGCATCAGCATCGGCAGCGGCAGCGGCGCGCGGCGAGAGGGCAGAATCATCAGCATCGGAAGCGGCGGTGGCGGCGCTCCCGCCGAAGAGAATCTACAAGAACAATGGCTATCTGATGGTCTCCTGCAACGGTGGGCTTAACCAGATGCGAGCAGCTATATGTGATATGGTGACGATTGCAAGATACCTGAACGTCACCCTTATCGTCCCAGAACTGGACAAAACTTCATTTTGGGCTGATCCTAGTGAGTTCAAGGATATATTTGATGTGGATTACTTCATATCATCATTGAGAGACGAGGTTCGGATACTGAAAGAGCTGCCTCCAAGGCTGAAAAGAAGAGTTGAACTGGGATATGTTCGCTCGATGCCACCTGTCAGTTGGTCTGATATATCTTATTACCAAAATCAGGTTTGGTGAATCTCTCGTTTTCGTTGATGTATTCATCATGAACTGAAAATCATGTGCAAAAATCAGGGGAGGATTGTAAGTGTTTATTTGCGGAAAACAGATTCTACCACTGATTAGGAAGTACAAGATCGTTCATCTGAACAAAACTGATGCTCGCCTTGCAAATAATGGCCTACCTATGGAGATTCAGAAATTGAGGTGCCGTGTCAATTTTGCTGCATTGAGATTTACCCCTGAGATAGAAGAGCTGGGTAGGCGTGTGGTTCGAATTCTTCGTCGTAATGGCCCTTTTCTGGTTCTTCACTTGCGATATGAAATGGACATGCTCGCGTTCTCTGGTTGCACACATGGTTGCAGCAACGAGGAGGCTGAGGAGCTCACAAGAATGAGATATGCTTACCCATGGTGGAAAGAGAAGGTGATTGACTCAAATGCAAAGAGGAACGACGGGCTCTGTCCATTAACACCGGAGGAGACTGCAATGGTATTAAAGGCACTAGACATTGATAGCAGTTATCAAATATACATTGCCGCTGGTGAAATATACGGTGGGCAAAGAAGAATGTCTGCCCTTACCTCAGCTTATCCCAATGTGGTGAGAAAAGAGACATTATTGCCTTCAGATCTCAGGTTTTTCCAGAACCATTCCTCCCAGATGGCAGCATTAGATTACATTGTATCCTTGGAGAGTGATATTTTTATCCCCACTTATGATGGTAATATGGCAAAAGTTGTTGAAGGTCATCGCAGATACTTGGGCTTCAAGAAGACTGTACTGCTAGATAGGAAGCTTATAGTTGAGCTCGTTGATCAGTACAAAAACGGCACAATGAGATGGAACCATTTCTCCTCCGCTGTGAAGGCGTCGCATAGCAGCCGCATGGGCGCGCCATCAAGGAGGCAGATGATTCCTGACAAACCTAAGGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGTTTGCACCAA-CCAGAAGAGCTATCAGTTTTGTGACACCCCTCCCACTATACAGAATTACACATTCTTTCAGGATTATATTACAGATTGAATTGGCAATAAATGGAGGCCCAGTTGTATTGATGAATAAAAGCACACGAGATGAGAGAATTTGGCCTCCTTTTGCTAGGTGACTGTTACATAACATACACGTTGGCATAATTTTTTGCCGTTTTCT-CCCAAAAAT-AAG-CATGTAATTTTGTTTTGTAAATATAAGCATACATGCTCACAGGTGTTGAGTTGTTCGTACATATACATACGGATCAAGACTTGTCAAAAATTCTTCCACTGTACTTCTCTGTACTACATTTGGGCAGTTGGTGGTTCATGCATGTACTTTCCTGATTGTTTCTGAATTCTGAATTATCATTTT]
[+] EMBL AK073003 [CGTCTTGACACGCGCCTCCTCCTCGCCTCGCCTCGCCGCCGGTGGCCGCCACCGCCGCCGCCGACGCAGCCGTCGCCATCGCCGCGCCCACCCTGGCTTGGCGGCGAGCCGAGCAACAGGAAGGCGATAAGCACGCGAGGAGGAGCCCATAGCAAAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTTTGATCACGCAAGACCGCGGCGTGCGAGGACCTTCCGGGTGCTGTGCTGTGCTGCGCGTGCGGCTGTTTGGGCGGCGGCGCGCGCCTTCGGATGAGATGCGCAGGGGCGGGGTGAAGGCGGCGGCGGCGGCCGAGAAGGCGCGGGAGGCGGCGCGGGCGAAGGTGTGGGCGGCGCGGGCGAGCACCACCGTGGTGCTCTGGCTGTGCTGCGCGCTGCTGCTCGCGACGTCGCGGGAGCTCGGGAGGTGGTCGGGCTGCCTCACCCAGCCGCTGATCGTCGTAGAGCGCCGGTTCGAGGCGGTTGCCGCCGCGGGCAGCGAGAGGGCGGCTGCATCAGCATCGGCAGTGGCAGCGGCGCGCGGCGAGAGGGCAGAATCATCAGCATCGGAAGCGGCGGTGGCGGCGCTCCCGCCGAAGAGAATCTACAAGAACAGTGGCTATCTGATGGTCTCCTGCAACGGTGGGCTTAACCAGATGCGAGCAGCTATATGTGATATGGTGACGATTGCAAGATACCTGAACGTCACCCTTATCGTCCCAGAACTGGACAAAACTTCATTTTGGGCTGATCCTAGTGAGTTCAAGGATATATTTGATGTGGATTACTTCATATCATCATTGAGAGACGAGGTTCGGATACTGAAAGAGCTGCCTCCAAGGCTGAAAAGAAGAGTTGAACTGGGATATGTTCGCTCGATGCCACCTGTCAGTTGGTCTGATATATCTTATTACCAAAATCAGGTTTGGTGAATCTCTCGTTTTCGTTGATGTATTCATCATGAACTGAAAATCATGTGCAAAAATCAGGGGAGGATTGTAAGTGTTTATTTGCGGAAAACAGATTCTACCACTGATTAGGAAGTACAAGATCGTTCATCTGAACAAAACTGATGCTCGCCTTGCAAATAATGGCCTACCTATGGAGATTCAGAAATTGAGGTGCCGTGTCAATTTTGCTGCATTGAGATTTACCCCTGAGATAGAAGAGCTGGGTAGGCGTGTGGTTCGAATTCTTCGTCGTAATGGCCCTTTTCTGGTTCTTCACTTGCGATATGAAATGGACATGCTCGCGTTCTCTGGTTGCACACATGGTTGCAGCAACGAGGAGGCTGAGGAGCTCACAAGAATGAGGTATGCTTACCCATGGTGGAAAGAGAAGGTGATTGACTCAAATGCAAAGAGGAACGACGGGCTCTGTCCATTAACACCGGAGGAGACTGCAATGGTATTAAAGGCACTAGACATTGATAGCAGTTATCAAATATACATTGCCGCTGGTGAAATATACGGTGGGCAAAGAAGAATGTCTGCCCTTACCTCAGCTTATCCCAATGTGGTGAGAAAAGAGACATTATTGCCTTCAGATCTCAGGTTTTTCCAGAACCATTCCTCCCAGATGGCAGCATTAGATTACATTGTATCCTTGGAGAGTGATATTTTTATCCCCACTTATGATGGTAATATGGCAAAAGTTGTTGAAGGTCATCGCAGATACTTGGGCTTCAAGAAGACTGTACTGCTAGATAGGAAGCTTATAGTTGAGCTCGTTGATCAGTACAAAAACGGCACAATGAGATGGAACCATTTCTCCTCCGCTGTGAAGGCGTCGCATAGCAGCCGCATGGGCGCGCCATCAAGGAGGCAGATGATTCCTGACAAACCTAAGGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGTTTGCACCAA CCAGAAGAGCTATCAGTTTTGTGACACCCCTCCCACTATACAGAATTACACATTCTTTCAGGATTATATTACAGATTGAATTGGCAATAAATGGAGGCCCAGTTGTATTGATGAATAAAAGCACACGAGATGAGAGAATTTGGCCTCCTTTTGCTAGGTGACTGTTACATAACATACACGTTGGCATAATTTTTTGCCGTTTTCT CCCAAAAAT AAG CATGTAATTTTGTTTTGTAAATATAAGCATACATGCTCACAGGTGTTGAGTTGTTCGTACATATACATACGGATCAAGACTTGTCAAAAATTCTTCCACTGTACTTCTCTGTACTACATTTGGGCAGTTGGTGGTTCATGCATGTACTTTCCTGATTGTTTCTGAATTCTGAATTATCATTTT]
[+] EMBL CB636273 [ AGAGAGCTTTGATCACGCAAGACCGCGGCGTGCGAGGACCTTCCGGGTGCTGTGCTGTGCTGCGCGTGCGGCTGTTTGGGCGGCGGCGCGCGCCTTCGGATGAGATGCGCAGGGGCGGGGTGAAGGCGGCGGCGGCGGCCGAGAAGGCGCGGGAGGCGGCGCGGGCGAAGGTGTGGGCGGCGCGGGCGAGCACCACCGTGGTGCTCTGGCTGTGCTGCGCGCTGCTGCTCGCGACGTCGCGGGAGCTCGGGAGGTGGTCGGGCTGCCTCACCCAGCCGCTGATCGTCGTAGAGCGCCGGTTCGAGGCGGTTGCCGCCGCGGGCAGCGAGAGGGCGGCTGCATCAGCATCGGCAGCGGCAGCGGCGCGCGGCGAGAGGGCAGAATCATCAGCATCGGAAGCGGCGGTGGCGGCGCTCCCGCCGAAGAGAATCTACAAGAACAATGGCTATCTGATGGTCTCCTGCAACGGTGGGCTTAACCAGATGCGAGCAGCTATATGTGATATGGTGACGATTGCAAGATACCTGAACGTCA ]
[+] EMBL CK085203 [ GGAGGTGGTCGGGCTGCCTCACCCAGCCGCTGATCGTCGTAGAGCGCCGGTTCGAGGCGGTTGCCGCCGCGGGCAGCGAGAGGGCGGCTGCATCAGCATCGGCAGCGGCAGCGGCGCGCGGCGAGAGGGCAGAATCATCAGCATCGGAAGCGGCGGTGGCGGCGCTCCCGCCGAAGAGAATCTACAAGAACAATGGCTATCTGATGGTCTCCTGCAACGGTGGGCTTAACCAGATGCGAGCAGCTATATGTGATATGGTGACGATTGCAAGATACCTGAACGTCACCCTTATCGTCCCAGAACTGGACAAAACTTCATTTTGGGCTGATCCTAGTGAGTTCAAGGATATATTTGATGTGGATTACTTCATATCATCATTGAGAGACGAGGTTCGGATACTGAAAGAGCTGCCTCCAAGGCTGAAAAGAAGAGTTGAACTGGGATATGTTCGCTCGATGCCACCTGTCAGTTGGTCTGATATATCTTATTACCAAAATCAGGTTTGGTGAATCTCTCGTTTTCGTTGATGTATTCATCATGAACTGAAAATCATGTGCAAAAATCAGGGGAGGATTGT ]
[+] EMBL CB642561 [ GCGCGCGGCGAGAGGGCAGAATCATCAGCATCGGAAGCGGCGGTGGCGGCGCTCCCGCCGAAGAGAATCTACAAGAACAATGGCTATCTGATGGTCTCCTGCAACGGTGGGCTTAACCAGATGCGAGCAGCTATATGTGATATGGTGACGATTGCAAGATACCTGAACGTCACCCTTATCGTCCCAGAACTGGACAAAACTTCATTTTGGGCTGATCCTAGTGAGTTCAAGGATATATTTGATGTGGATTACTTCATATCATCATTGAGAGACGAGGTTCGGATACTGAAAGAGCTGCCTCCAAGGCTGAAAAGAAGAGTTGAACTGGGATATGTTCGCTCGATGCCACCTGTCAGTTGGTCTGATATATCTTATTACCAAAATCAGGTTTGGTGAATCTCTCGTTTTCGTTGATGTATTCATCATGAACTGAAAATCATGTGCAAAAATCAGGGGAGGATTGTAAGTGTTTATTTGCGGAAAACAGATTCTACCACTGATTAGGAAGTACAAGATCGTTCATCTGAACAAAACTGATGCTCGCCTTGCAAATAATGGCCTACCTATGGAGATTCAGAAATTGAGGTGCCGTGTCAATTTTGCTGCATTGAGATTTACCCCTGAGATAGAAGAGCTGGGTAGGCGTGTGGTTCGAATTCTTCGTCGTAATGGCCCTTTTCTGGTTCTTCACTTGCGATATGAAATGGACATGCTCGCGTTCTCTGGTTGCACACATGGTTGCAGCAACGAGGAGGCTGANGAGCTCACAAGAATGAGATA ]
[+] EMBL CK085093 [ CGTCCCAGAACTGGACAAAACTTCATTTTGGGCTGATCCTAGTGAGTTCAAGGATATATTTGATGTGGATTACTTCATATCATCATGGAGAGACGAGGTTCGGATACTGAAAGAGCTGCCTCCAAGGCTGAAAA ]
[+] EMBL CA766536 [ gacnAGA CAGGG GGGCGTGTGGTTCGAATTCTTCGTCGTAATGGCCCTTTTCTGGTTCTCCACTTGCGATATGAAATGGACATGCTCGCGTTCTCTGGTTGCACACATGGTTGCAGCAACGAGGAGGCTGAGGAGCTCACAAGAATGAGATATGCTTACCCATGGTGGAAAGAGAAGGTGATTGACTCAAATGCAAAGAGGAACGACGGGCTCTGTCCATTAACACCGGAGGAGACTGCAATGGTATTAAAGGCACTAGACATTGATAGCAGTTATCAAATATACATTGCCGCTGGTGAAATATACGGTGGGCAAAGAAGAATGGCTGCCCTTACCTCAGCTTATCCCAATGTGGTGAGAAAAGAGACATTATTGCCTTCAGATCTCAGGTTTTTCCAGAACCATTCCTCCCAGATGGCAGCATTAGATTACATTGTATCCTTGGAGAGTGATATTTTTATCCCCACTTATGATGGTAATATGGCAAAAGTTGTTGAAGGTCATCGCAGATACTTGGGCTTCAAGAAGACTGTACTGCTAGATAGGAAGCTTATAGTTGAGCTCGTTGATCAGTACAAAAACGGCACAATGAGCTGGNACCATTTCTCCTCCGCTGTGAANGCGTCGCATAGCAGCCGCATGGGCGCGCCATCAAGGAGGCAGATGATTNCTGACAAACCTAANGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGGTTGCACCAANCCAGAANAGCTNTCAGTTTTGNGACANCCCTTCCACTATACAAAAATACACA ]
[-] EMBL CB642562 [ GTTATCAAATATACATTGCCGCTGGTGAAATATACGGTGGGCAAAGAAGAATGTCTGCCCTTACCTCAGCTTATCCCAATGTGGTGAGAAAAGAGACATTATTGCCTTCAGATCTCAGGTTTTTCCAGAACCATTCCTCCCAGATGGCAGCATTAGATTACATTGTATCCTTGGAGAGTGATATTTTTATCCCCACTTATGATGGTAATATGGCAAAAGTTGTTGAAGGTCATCGCAGATACTTGGGCTTCAAGAAGACTGTACTGCTAGATAGGAAGCTTATAGTTGAGCTCGTTGATCAGTACAAAAACGGCACAATGAGATGGAACCATTTCTCCTCCGCTGTGAAGGCGTCGCATAGCAGCCGCATGGGCGCGCCATCAAGGAGGCAGATGATTCCTGACAAACCTAAGGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGTTTGCACCAA CCAGAAGAGCTATCAGTTTTGTGACACCCCTCCCACTATACAGAATTACACATTCTTTCAGGATTATATTACAGATTGAATTGGCAATAAATGGAGGCCCAGTTGTATTGATGAATAAAAGCACACGAGATGAGAGAATTTGGCCTCCTTTTGCTAGGTGACTGTTACATAACATACACGTTGGCATAATTTTTTGCCGTTTTCT CCCAAAAAT AAG CATGTAATTTTGTTTTGTAAATATAAGCATACATGCTCACAGGTGTTGAGTTGTTCGTACATATACATACGGATCAAGACTTGTCAAAAATTCTTCCACTGTA ]
[-] EMBL CB636274 [ TCCTCCGCTGTGAAGGCGTCGCATAGCAGCCGCATGGGCGCGCCATCAAGGAGGCAGATGATTCCTGACAAACTTAAGGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGTTTGCACCAA CCAGAAGAGCTATCAGTTTTGTGACACCCCTCCCACTATACAGAATTACACATTCTTTCAGGATTATATTACAGATTGAATTGGCAATAAATGGAGGCCCAGTTGTATTGATGAATAAAAGCACACGAGATGAGAGAATTTGGCCTCCTTTTGCTAGGTGACTGTTACATAACATACACGTTGGCATAATTTTTTGCCGTTTTCTCCCCAAAAATAAAGCCATGTAATTTTGTTTTGTAAATATAAGCATACATGCTCACAGGTGTTGAGTTGTT ]
[+] EMBL BI804852 [ CTGTGAAGGCGTCGCATA CA CCGCATGGGCGCGCCATCAAGGA GCAGATGATTCCTGAC AACCTAAGGAAGAAGACTACTTCTATGCAAATCCTCATGAGTGTTTGCACCAA CCAGAAGAGCTATCAGTTTTGTGACACCCCTCCCACTATACAGAATTACACATTCTTTCAGGATTATATTACAGATTGAATTGGCAATAAATGGAGGCCCAGTTGTATTGATGAATAAAAGCACACGAGATGAGAGAATTTGGCCTCCTTTTGCTAGGTGACTGTTACATAACATACACGTTGGCATAATTTTTTGCCGTTTTCT CCCAAAAAT AAG CATGTAATTTTGTTTTGTAAATATAAGCATACATGCTCACAGGTGTTGAGTTGTTCGTACATATACATACGGATCAAGACTTGTC AAAATTCTTCCAaaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||