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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3019 fasta sequence
[CACTTCTTGATTAGAAATGGACAGTAGCCGAGATTCTGAAGAAGAAAGGCCTCAAAGGAAGGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGATGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTATTGTGACTATGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCGAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGGTTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTGCTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCTTGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGTTGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTTTGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCTGGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGCATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGTTATTTAAATCATTCCTCGAGTCAATGGGTGGCCGGTCTCCAAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGCAGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAATGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAAGTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAATGGATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATGGTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGAGGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGCCCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCGCTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGCAGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGGAGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTATGCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTCTTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTTCAGCCTGCAAAATGTGGACACAATTCCTGAGAAGTACATTCCGAAACGATGGACAAAAGATGCCAGGAGAAGCATGTATAAGCTTAGTCAAGATGATTCAACACAACAGGAATGCACTGAGGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAGCCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGCACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAAAAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAAAAAAGCAAAACCAACCCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCAAACTAATGTGCACCAGTTTCAATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGCTTTTTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCA---CAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGGTGGTGCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCACCGTCTCTGCATGGGAGGCAGTAGTTCCAAACTGACCTTGTTATATGTTTTTTTTTGTGAAGATTTTGGATCTAATTTAGTGTACCTGTACAATCTGACTGCTGATTAAGATGACACAGCAGTATTGATCTGATATTGAAACTGTCTATGCTCTT]
[+] EMBL AK066174 [CACTTCTTGATTAGAAATGGACAGTAGCCGAGATTCTGAAGAAGAAAGGCCTCAAAGGAAGGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGATGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTATTGTGACTATGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGGGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCGAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGGTTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTGCTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCTTGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGTTGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTTTGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCTGGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGCATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGTTATTTAAATCATTCCTCGAGTCAATGGGTGGCCGGTCTCCAAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGCAGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAATGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAAGTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAATGGATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATGGTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGAGGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGCCCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCGCTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGCAGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGGAGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTATGCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTCTTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTTCAGCCTGCAAAATGTGGACACAATTCCTGAGAAGTACATTCCGAAACGATGGACAAAAGATGCCAGGAGAAGCATGTATAAGCTTAGTCAAGATGATTCAACACAACAGGAATGCACTGAGGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAGCCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGCACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAAAAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAAAAAAGCAAAACCAACCCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCAAACTAATGTGCACCAGTTTCAATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGCTTTTTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCA CAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGGTGGTGCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCACCGTCTCTGCATGGGAGGCAGTAGTTCCAAACTGACCTTGTTATATGTTTTTTTTTGTGAAGATTTTGGATCTAATTTAGTGTACCTGTACAATCTGACTGCTGATTAAGATGACACAGCAGTATTGA ]
[+] EMBL CB631386 [CACTTCTTGATTAGAAATGGACAGTAGCCGAGATTCTGAAGAAAAAAGGCCTCAAAGGAAGGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGATGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTATTGTGACTATGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGNGGAAAGACACATGTTGAGATCTGCAAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACA ]
[-] EMBL CB648577 [ ATTGTGACTATGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCGAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGGTTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTGCTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCTTGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGTTGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTTTGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCTGGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGGATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGaaggg ]
[+] EMBL CB677193 [ AAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGCAGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAATGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAAGTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAATGAATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATGGTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGAGGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGCCCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCGCTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGCAGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGGAGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTATGCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTCTTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTTCAGCCTGCAAAATGTGGAC ]
[+] EMBL CB663813 [ CAGGAGAAGCATGTATAAGCTTAGTCAGGATGATTCAACACAACAGGAATGCACTGAGGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAGCCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGCACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAAAAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAAAAAAGCAAAACCAACCCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCAAACTAATGTGCACCAGTTTCAATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGCTTTTTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCACAGCAGGATTTCTCGGCATA ]
[-] EMBL CB631387 [ GTTGTACTATCAGGCTTTTTCATCTGCCCCAATGCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCA CAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGGTGGTGCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCCGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCACCGTCTCTGCATGGGAGGCAGTAGTTCCAAACTGACCTTGTTATATG TTTTTTTTGTGAAGATTTTGGATCTAATTTAGTGTACCTGTACAATCTGACTGGTGATTAAGATGACACAGCAGTATTGATCTGATA ]
[-] EMBL CB677194 [ CATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCACAGCAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGGTGGTGCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCACCGTCTCTGCATGGGAGGCAGTAGTTCCAAACTGACCTTGTTATATGTTTTTTTTTGTGAAGATTTTGGATCTAATTTAGTGTACCTGTACAATCTGACTGCTGATTAAGATGACACAGCAGTATTGATCGGATATTGAAACTGTCTATGCTCTT]
[-] EMBL CB663814 [ GCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCCCCGTCTCTGCATGGGAGGCAGTAGTTCCAAACTGACCTTGTTATATGTTTTTTTTTGTGAAGATTTTGGATCTAATTTAGTGTACCTGTACAATCTGACTGCTGATTAAGATGACCCAGCAGTATTGATCTGATATTGAAACTGTCTATGCTCTT]
consensusID : consensus_11878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[GTGGCGCAAAGAATGTTTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTTCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTTTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTTTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAAAGGCCAGGAACATGTTGCTTCCATTGTTTTAAGGAAAAGGTTGTAACTGGGGGTAGTCCCTAGCTATTTACAGGATCAGATTTTTTGGGGTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTTTTGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCCCCGTTTTTGCATGGGAGGCAGTAGTTTCCAACTGGCCCTGTTATATGTTTTTTTTTGTGAAGATTTTGGATTTAATTTAGTGTACCTGTACAATTTGGCTGCTGATTAAGATGACCCAACCAGTATTGGTTTGAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA760512 [GTGGCGCAAAGAATGTTTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTTCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTTTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTTTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAAAGGCCAGGAACATGTTGCTTCCATTGTTTTAAGGAAAAGGTTGTAACTGGGGGTAGTCCCTAGCTATTTACAGGATCAGATTTTTTGGGGTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTTTTGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCCCCGTTTTTGCATGGGAGGCAGTAGTTTCCAACTGGCCCTGTTATATGTTTTTTTTTGTGAAGATTTTGGATTTAATTTAGTGTACCTGTACAATTTGGCTGCTGATTAAGATGACCCAACCAGTATTGGTTTGAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11878#0 CACTTCTTGATTAGAAATGGACAGTAGCCGAGATTCTGAAGAAGAAAGGCCTCAAAGGAA 60
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGA 120
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTA 180
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TTGTGACTATGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCAT 240
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGA 300
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAAT 360
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCA 420
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCGAAGTCGCTTGC 480
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGG 540
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTG 600
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCT 660
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGT 720
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTT 780
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCT 840
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGC 900
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 ATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGTTATTTAAATCATTCCTCGAGTC 960
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 AATGGGTGGCCGGTCTCCAAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGC 1020
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 AGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAA 1080
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAA 1140
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAA 1200
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGGATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATG 1260
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGA 1320
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGC 1380
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCG 1440
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGC 1500
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 AGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGG 1560
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 AGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTAT 1620
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTC 1680
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTT 1740
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CAGCCTGCAAAATGTGGACACAATTCCTGAGAAGTACATTCCGAAACGATGGACAAAAGA 1800
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TGCCAGGAGAAGCATGTATAAGCTTAGTCAAGATGATTCAACACAACAGGAATGCACTGA 1860
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 GGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAG 1920
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGC 1980
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 ACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAA 2040
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 AAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAAAAAAGCAAAACCAAC 2100
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 CCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCAAACTAATGTGCACCAGTTTCA 2160
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 ATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGCTTT 2220
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCC 2280
consensus_11878#1 ------------------------------------------------------------
consensus_11878#0 TCTTTGTGCACCACAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGG 2340
consensus_11878#1 -----------------------------------------------------------G 1
*
consensus_11878#0 TGGTGCAAAGAATGTCTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTTTGGAAAATGC 2400
consensus_11878#1 TGGCGCAAAGAATGTTTGAAGGACAGTAAGGAATCTGCTAAGACGTCTTT-GGAAAATGC 60
*** *********** ********************************** *********
consensus_11878#0 TGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGT 2460
consensus_11878#1 TGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTTCCGGAGGTGT 120
************************************************* **********
consensus_11878#0 GATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGG 2520
consensus_11878#1 GATGTTGCTTTTGGATGTTAATTTTTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGG 180
************************ ***********************************
consensus_11878#0 TCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAG 2580
consensus_11878#1 TCTTTGACGTTTTTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAG 240
************ ***********************************************
consensus_11878#0 GCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCT 2640
consensus_11878#1 GCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAAAGGCCAGGAACATGTTGCT 300
**************************************** *******************
consensus_11878#0 TCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAG 2700
consensus_11878#1 TCCATTGTTTTAAGGAAAAGGTTGTAACTGGGGGTAGTCCCTAGCTATTTACAGGATCAG 360
******** *********************** ****** ********************
consensus_11878#0 ATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTA 2760
consensus_11878#1 ATTTTTTGGGGTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTA 420
*** ****** *************************************************
consensus_11878#0 CTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGA 2820
consensus_11878#1 CTAGTTGTCAAGAGCAGATAGCATCCCTTTTTGAAGGAGTTGAGCTGCAGAACAATGTGA 480
***************************** * ****************************
consensus_11878#0 AAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCACCGTCTCTGCATGGGA 2880
consensus_11878#1 AAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGAAGTGCCCCGTTTTTGCATGGGA 540
******************************************* **** * *********
consensus_11878#0 GGCAGTAGTTCCAAACTGACCTTGTTATATGTTTTTTTTTGTGAAGATTTTGGATCTAAT 2940
consensus_11878#1 GGCAGTAGTTTCCAACTGGCCCTGTTATATGTTTTTTTTTGTGAAGATTTTGGATTTAAT 600
********** * ***** ** ********************************* ****
consensus_11878#0 TTAGTGTACCTGTACAATCTGACTGCTGATTAAGATGACACAGC-AGTATTGATCTGATA 2999
consensus_11878#1 TTAGTGTACCTGTACAATTTGGCTGCTGATTAAGATGACCCAACCAGTATTGGTTTGAAA 660
****************** ** ***************** ** * ******* * *** *
consensus_11878#0 TTGAAACTGTCTATGCTCTT 3019
consensus_11878#1 AAAAAAAAAAAAAAAAAA-- 678
*** *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||