cluster # 1189

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Oryza sativa
cluster # 1189 cluster # 1189 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1189#0 length = 602 sequences # 2

consensusID : consensus_1189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 602
fasta sequence

                              [TTTTTTTTTCTTTTTTTTTTTTTTTTAAGCGTAGTTTATCCACCATAATTAAGATCGAGACCTTGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTTTTTCTTGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACTCACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAAGAAACAGGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGNTGTTGTGCCACGGGTCAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCTGCAACAACAACATCAACAAAAATTCAGAAACAATGGCGTCGTTTCATTGTATGCTGCTCTTC]

[+] EMBL CF302843             [TTTTTTTTTCTTTTTTTTTTTTTTTTAAGCGTAGTTTATCCACCATAATTAAGATCGAGACCTTGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTTTTTCTTGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACTCACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAAGAAACAGGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCG                                                                                                                                                                                         ]
[+] EMBL CF307725             [             TTTTTTAGCAATTAAGCGTAGTTTATCCACCATAATTAAGATCGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGCAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGNTGTTGTGCCACGGGTCAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCTGCAACAACAACATCAACAAAAATTCAGAAACAATGGCGTCGTTTCATTGTATGCTGCTCTTC]




>consensus_1189#0
TTTTTTTTTCTTTTTTTTTTTTTTTTAAGCGTAGTTTATCCACCATAATTAAGATCGAGA
CCTTGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGT
ACATCAGAAATTCACCACTCAACTCACCCCCTTTTTCTTGCATCCAGATCCATGCATGCA
GGAAACAATTACCACAACTCACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTC
TCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAAG
AAACAGGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCA
AGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCT
GGATGATGGNTGTTGTGCCACGGGTCAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCC
TTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCT
GCAACAACAACATCAACAAAAATTCAGAAACAATGGCGTCGTTTCATTGTATGCTGCTCT
TC

clustalw multiple alignements is not computed in this case