These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11890#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2366 fasta sequence [GAGAAGGAGAAGGCACGCACCTCAAGATATACCTACTGTTTATTCCCTTGTCCTGCCACGTTGCTCCAAGAAGCAGCTCAGCTCGCCGTGCCCTGCAGCTCTACCGGCAGCATCATCATCACCTGTATCCCCGAAAGGCAGCTTCTTCCGGTTGTAGCTACCGAGCTACCAGTACCACCCACCCTGAGAGCCAAGAAATGGCGGCCTGATTGGGCCCCCCCGTGAGCTCCGAATCCGCCGGCGGCCAACTGCCGGATCTCCTCGCAGCCAGCGCGCCGCCGGGAGGGACGGAGATTGGCGGCGGA-GGAGGGGAGGTGTCCAGGCCAGGTCAGGTGGGATCTCCGCTTGCTTCGCCGGCTTAGAAATCGGCATCTTTGTCTTGCAGATGTGAGCTTGCAAGTGTGGGGTCTCCGCGTCTTTTTCCAGGTGGCAGGCATGGAGGTGAGGCTGCTGCTTCTAGTGTTCATATGTCTGCATGCTCTTCTTTGGGCGGCTTCGGCTCAGCAGCCAGAGGAGGCGACGGTCATAGTTAAGGGATCGACAAAAATCGCTGAAACGAATAAAAATTATATATGTGCTACAATCGATTGGTGGCCACCAGAGAAGTGTAACTATAATCAGTGTCCATGGGGCCAATCGTCAATTCTAAACTTGGATTTGGATCATCCCTTCCTGGCTCAAGCCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGCAAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATTTGGTTTCTCAGATGGTTGTCTAAGCATGGATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGTGCAATTATCACATTTGGTCTGAATGCGCTCTATGGGAGGTACAATGTCCGTCGTTCTTTCTGGGCTAGCAAATGGAACTCTACAAATGCATATAATTTTGTAAAATACACAATCTCAAAGGGATATCCAGTTGACTCATGGGAATATGGTAATGAACTGAGCGGGCATGGAATTGGGGCAAGAGTCGATGCTACACTGTATGGAAAAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGCACCACTCTCCCAGCCATCCCTGTTAGCCCCTGGAGGATTCTTTGATCAGCAGTGGTACACTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCATCATATTTATAATCTTGGTGGAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTTAGATCGTTCAGAAGATACTTATAGGGATATGCAACTCGCCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTAAGTACAATACAAAAATATTCTGCAGGCAGACTCTGATTGGTGGCCACTATGGTCTACTTGACACCCAAACTTTTTTGCCAAATCCTGATTACTATAGTGCTCTACTATGGCATCGGCTTATGGGCAGGGAAGTTCTTTCAGTTGATATCAATGCGCCGCGTAAACTGCGTGCTTATGCTCATTGCAGGAAACAGCAGCAAGGAATCACCCTCCTGTTGATCAACCTGAGCAATACCACCGGATACAACGTCACCCTCCAGAATGACATCAATGTCAACCTTGACAAAACAGCCAGCCTTCATAAGCACAATTCTTTCTCACACAGCCTCAGAAGAGCGGTTTCATGGCTGGGGCGCAAGCCGTCAAGCGACGTCGCGAGGAGGGAGGAGTACCACCTGACGGCCAAGGACGGCGACCTCCAGAGCAAGACGATGCTGCTCAACGGCGCACCGCTGGAACTCTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAAGAAGGATCACAAGAATTTACCTTAGAATGCATAGAACGATTACAAGAATTTAAACATATTGTGAGTAAATTACAAGAATGTAAACAGGTTTTGAGTAAATAACAATTG] [+] EMBL AK072765 [GAGAAGGAGAAGGCACGCACCTCAAGATATACCTACTGTTTATTCCCTTGTCCTGCCACGTTGCTCCAAGAAGCAGCTCAGCTCGCCGTGCCCTGCAGCTCTACCGGCAGCATCATCATCACCTGTATCCCCGAAAGGCAGCTTCTTCCGGTTGTAGCTACCGAGCTACCAGTACCACCCACCCTGAGAGCCAAGAAATGGCGGCCTGATTGGGCCCCCCCGTGAGCTCCGAATCCGCCGGCGGCCAACTGCCGGATCTCCTCGCAGCCAGCGCGCCGCCGGGAGGGACGGAGATTGGCGGCGGA GGAGGGGAGGTGTCCAGGCCAGGTCAGGTGGGATCTCCGCTTGCTTCGCCGGCTTAGAAATCGGCATCTTTGTCTTGCAGATGTGAGCTTGCAAGTGTGGGGTCTCCGCGTCTTTTTCCAGGTGGCAGGCATGGAGGTGAGGCTGCTGCTTCTAGTGTTCATATGTCTGCATGCTCTTCTTTGGGCGGCTTCGGCTCAGCAGCCAGAGGAGGCGACGGTCATAGTTAAGGGATCGACAAAAATCGCTGAAACGAATAAAAATTATATATGTGCTACAATCGATTGGTGGCCACCAGAGAAGTGTAACTATAATCAGTGTCCATGGGGCCAATCGTCAATTCTAAACTTGGATTTGGATCATCCCTTCCTGGCTCAAGCCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGCAAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATTTGGTTTCTCAGATGGTTGTCTAAGCATGGATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGTGCAATTATCACATTTGGTCTGAATGCGCTCTATGGGAGGTACAATGTCCGTCGTTCTTTCTGGGCTAGCAAATGGAACTCTACAAATGCATATAATTTTGTAAAATACACAATCTCAAAGGGATATCCAGTTGACTCATGGGAATATGGTAATGAACTGAGCGGGCATGGAATTGGGGCAAGAGTCGATGCTACACTGTATGGAAAAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGCACCACTCTCCCAGCCATCCCTGTTAGCCCCTGGAGGATTCTTTGATCAGCAGTGGTACACTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCATCATATTTATAATCTTGGTGGAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTTAGATCGTTCAGAAGATACTTATAGGGATATGCAACTCGCCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTAAGTACAATACAAAAATATTCTGCAGGCAGACTCTGATTGGTGGCCACTATGGTCTACTTGACACCCAAACTTTTTTGCCAAATCCTGATTACTATAGTGCTCTACTATGGCATCGGCTTATGGGCAGGGAAGTTCTTTCAGTTGATATCAATGCGCCGCGTAAACTGCGTGCTTATGCTCATTGCAGGAAACAGCAGCAAGGAATCACCCTCCTGTTGATCAACCTGAGCAATACCACCGGATACAACGTCACCCTCCAGAATGACATCAATGTCAACCTTGACAAAACAGCCAGCCTTCATAAGCACAATTCTTTCTCACACAGCCTCAGAAGAGCGGTTTCATGGCTGGGGCGCAAGCCGTCAAGCGACGTCGCGAGGAGGGAGGAGTACCACCTGACGGCCAAGGACGGCGACCTCCAGAGCAAGACGATGCTGCTCAACGGCGCACCGCTGGAACTCTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAAGAAGGATCACAAGAATTTACCTTAGAATGCATAGAACGATTACAAGAATTTAAACATATTGTGAGTAAATTACAAGAATGTAAACAGGTTTTGAGTAAATAACAATTG] [+] EMBL AK105099 [ CTCAGCTCGCCGTGCCCTGCAGCTCTACCGGCAGCATCATCATCACCTGTATCCCCGAAAGGCAGCTTCTTCCGGTTGTAGCTACCGAGCTACCAGTACCACCCACCCTGAGAGCCAAGAAATGGCGGCCTGATTGGGCCCCCCCGTGAGCTCCGAATCCGCCGGCGGCCAACTGCCGGATCTCCTCGCAGCCAGCGCGCCGCCGGGAGGGACGGAGATTGGCGGCGGA GGAGGGGAGGTGTCCAGGCCAGGTCAGGTGGGATCTCCGCTTGCTTCGCCGGCTTAGAAATCGGCATCTTTGTCTTGCAGATGTGAGCTTGCAAGTGTGGGGTCTCCGCGTCTTTTTCCAGGTGGCAGGCATGGAGGTGAGGCTGCTGCTTCTAGTGTTCATATGTCTGCATGCTCTTCTTTGGGCGGCTTCGGCTCAGCAGCCAGAGGAGGCGACGGTCATAGTTAAGGGATCGACAAAAATCGCTGAAACGAATAAAAATTATATATGTGCTACAATCGATTGGTGGCCACCAGAGAAGTGTAACTATAATCAGTGTCCATGGGGCCAATCGTCAATTCTAAACTTGGATTTGGATCATCCCTTCCTGGCTCAAGCCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGCAAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATCTGGTTTCTCAGATGGTTGTCTAAGCATGGATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGTGCAATTATCACATTTGGTCTGAATGCGCTCTATGGGAGGTACAATGTCCGTCGTTCTTTCTGGGCTAGCAAATGGAACTCTACAAATGCATATAATTTTGTAAAATACACAATCTCAAAGGGATATCCAGTTGACTCATGGGAATATGGTAATGAACTGAGCGGGCATGGAATTGGGGCAAGAGTCGATGCTACACTGTATGGAAAAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGCACCACTCTCCCAGCCATCCCTGTTAGCCCCTGGAGGATTCTTTGATCAGCAGTGGTACACTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCATCATATTTATAATCTTGGTGGAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTCAGATCGTTCAGAAGATACTTATAGGGATATGCAACTCACCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTA ] [+] EMBL CF279723 [ CGAGCTACCAGTACCACCCACCCTGAGAGCCAAGAAATGGCGGCCTGATTGGGCCCCCCCGTGAGCTCCGAATCCGCCGGCGGCCAACTGCCGGATCTCCTCGCAGCCAGCGCGCCGCCGGGAGGGACGGAGATTGGCGGCGGAGGGAGGGGAGGTGTCCAGGCCAGGTCAGGTGGGATCTCCGCTTGCTTCGCCGGCTTAGAAATCGGCATCTTTGTCTTGCAGATGTGAGCTTGCAAGTGTGGGGTCTCCGCGTCTTTTTCCAGGTGGCAGGCATGGAGGTGAGGCTGCTGCTTCTAGTGTTCATATGTCTGCATGCTCTTCTTTGGGCGGCTTCGGCTCAGCAGCCAGAGGAGGCGACGGTCATAGTTAAGGGATCGACAAAAATCGCTGAAACGAATAAAAATTATATATGTGCTACAATCGATTGGTGGTCACCAGAGAAGTGTAACTATAATCAGTGTCCATGGGGCCAATCGTCAATTCTAAACTTGGATTTGGATCATCCCTTCCTGGCTCAAGCCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGC AGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATT ] [-] EMBL CF279724 [ GCTGCTCAACGGCGCACCGCTGGAACTCTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGAATGTAAAAaa ] consensusID : consensus_11890#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence [AGAGGACGAGACAAGGGGTCGGACGANGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTTGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAGCAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAAGAAGGATCCCAAGAATTTACCTTAGAATGCATAGAACGATTACAAGAATTTAAACATATTGTAAGTAAATTACAAGAATGTAAACAGATTTTGAGTAAATAACAATTGAATTGTGAGCAAAAAAAAAAAAAAA] [-] EMBL CA762353 [AGAGGACGAGACAAGGGGTCGGACGANGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTTGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAGCAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAAGAAGGATCCCAAGAATTTACCTTAGAATGCATAGAACGATTACAAGAATTTAAACATATTGTAAGTAAATTACAAGAATGTAAACAGATTTTGAGTAAATAACAATTGAATTGTGAGCAAAAAAAAAAAAAAA] consensusID : consensus_11890#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 427 fasta sequence [AGGTTATTTTATCATTATTAGTCCACTTTTTGTAATTAATAAGCAAAATTCATCAATGGCGACGCCATGTTTTCAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTTAGATCGTTCAGAAGATACTTATAGGGATATGCAACTCACCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTAAGTACAATACAAAAATATTCTGCAGGCAGACTCTGATTGGTGGCCACTATGGTCTACTTGACACCCAAACTTTTTTGCCAAATCCTGATTACTATAGTGCTCTACTATGGCATCGGCTTATGGGCAGGGAAG] [+] EMBL AU176455 [AGGTTATTTTATCATTATTAGTCCACTTTTTGTAATTAATAAGCAAAATTCATCAATGGCGACGCCATGTTTTCAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTTAGATCGTTCAGAAGATACTTATAGGGATATGCAACTCACCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTAAGTACAATACAAAAATATTCTGCAGGCAGACTCTGATTGGTGGCCACTATGGTCTACTTGACACCCAAACTTTTTTGCCAAATCCTGATTACTATAGTGCTCTACTATGGCATCGGCTTATGGGCAGGGAAG] consensusID : consensus_11890#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 401 fasta sequence [CCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGCAAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATTTGGTTTCTCAGATGTNTTTTTAAGCATGGATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGGTAATGAACTGAGCGGGCATGGAATTGGGGCAAGAGTCGATGCTACACTGTATGGAAAAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGCACCACTCTCCCAGCCATCCCTGTTAGCCCCTGGAGGATTCTTTGATCAGCAGTGGTACACTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCA] [+] EMBL CF325984 [CCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGAGGCTCTTTGCAAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCCGTTCACAAACATGTCAAATGGTTTATTTGGTTTCTCAGATGTNTTTTTAAGCATGGATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGGTAATGAACTGAGCGGGCATGGAATTGGGGCAAGAGTCGATGCTACACTGTATGGAAAAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGCACCACTCTCCCAGCCATCCCTGTTAGCCCCTGGAGGATTCTTTGATCAGCAGTGGTACACTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCA] consensusID : consensus_11890#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence [GCGCNCCGCTGGAACTNTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTNTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTANAATGTTCCATTTGTTCTTTTCTGGTTTAAANAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAANAAGGATCNCAAGAATTTNCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU176456 [GCGCNCCGCTGGAACTNTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTNTTGAGTGATCAATCTTGCCTTCTTGTTGAGTATTACGCCCTTANAATGTTCCATTTGTTCTTTTCTGGTTTAAANAGCAAAACCCTTGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAANAAGGATCNCAAGAATTTNCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11890#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 176 fasta sequence [GTTCCCTTTGTTCTTTTTTGGTTTAAATAGCCAAACCCTTGGGATGTAAGCCTTTAGAATGTTAAAGAATGGAGTGTTCCCTTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGGATGTTAAAGAATGTTCCAAAACCCTTCGGATTCAAGAAGGGTCCCAAGGATTTTCCT] [-] EMBL CF323684 [GTTCCCTTTGTTCTTTTTTGGTTTAAATAGCCAAACCCTTGGGATGTAAGCCTTTAGAATGTTAAAGAATGGAGTGTTCCCTTTGTTCGTTTTCTGGTTTGAATAACAAAGCCTTTAGGATGTTAAAGAATGTTCCAAAACCCTTCGGATTCAAGAAGGGTCCCAAGGATTTTCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11890#0 GAGAAGGAGAAGGCACGCACCTCAAGATATACCTACTGTTTATTCCCTTGTCCTGCCACG 60 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TTGCTCCAAGAAGCAGCTCAGCTCGCCGTGCCCTGCAGCTCTACCGGCAGCATCATCATC 120 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ACCTGTATCCCCGAAAGGCAGCTTCTTCCGGTTGTAGCTACCGAGCTACCAGTACCACCC 180 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ACCCTGAGAGCCAAGAAATGGCGGCCTGATTGGGCCCCCCCGTGAGCTCCGAATCCGCCG 240 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 GCGGCCAACTGCCGGATCTCCTCGCAGCCAGCGCGCCGCCGGGAGGGACGGAGATTGGCG 300 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 GCGGAGGAGGGGAGGTGTCCAGGCCAGGTCAGGTGGGATCTCCGCTTGCTTCGCCGGCTT 360 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 AGAAATCGGCATCTTTGTCTTGCAGATGTGAGCTTGCAAGTGTGGGGTCTCCGCGTCTTT 420 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TTCCAGGTGGCAGGCATGGAGGTGAGGCTGCTGCTTCTAGTGTTCATATGTCTGCATGCT 480 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 CTTCTTTGGGCGGCTTCGGCTCAGCAGCCAGAGGAGGCGACGGTCATAGTTAAGGGATCG 540 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ACAAAAATCGCTGAAACGAATAAAAATTATATATGTGCTACAATCGATTGGTGGCCACCA 600 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 GAGAAGTGTAACTATAATCAGTGTCCATGGGGCCAATCGTCAATTCTAAACTTGGATTTG 660 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 GATCATCCCTTCCTGGCTCAAGCCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGA 720 consensus_11890#3 ----------------------CCATTCAAGCATTTGATAATTTGAGGATTAGACTGGGA 38 consensus_11890#1 --------AGAGGACGAGACAAGGGGTCGGACGANGGCGGCGTTCCGGCCATGAGCCCTG 52 consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ---------GCGCNCCGCTGGAACTNTCGGACGACGGCGGCGTTCCGGCCATGAGCCCTG 51 consensus_11890#2 -------------------------------------AGGTTATTTTATCATTATTAGTC 23 consensus_11890#0 GGCTCTTTGC----AAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCC 776 consensus_11890#3 GGCTCTTTGC----AAGACCGAGTTGTTTATGATGTGGGTACAAACAGTCCATGCGCCCC 94 consensus_11890#1 CGCTCGTTGCTGTCAACTTGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTC 112 consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 CGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTGTAGTTC 111 consensus_11890#2 CACTTTTTGTAATTAATAAGCAAAATTCATCAATGGCGACGCCATGTTTTCAGGGAATGA 83 consensus_11890#0 GTTCACAAAC--ATGTCAAATGGTTTATTTGGTTTCTCA-----GATGGTTGTCTAAGCA 829 consensus_11890#3 GTTCACAAAC--ATGTCAAATGGTTTATTTGGTTTCTCA-----GATGTNTTTTTAAGCA 147 consensus_11890#1 TTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGTTGAGTA 172 consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 TTCCAATGTTTGAGGCCAAGGCCTGTTNTTGAGTGATCAATCTTGCCTTCTTGTTGAGTA 171 consensus_11890#2 TGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATT--------TAGATCGTTCAGAA 135 consensus_11890#0 TGG-ATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGGTGCAATTATCACATTT 888 consensus_11890#3 TGG-ATAGGTGGGACAAACTGAATGCTCTATTCCAAAAAACAGG---------------- 190 consensus_11890#1 TTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATA---------------- 216 consensus_11890#5 ---------------GTTCCCTTTGTTCTTTTTTGGTTTAAATA---------------- 29 consensus_11890#4 TTACGCCCTTANAATGTTCCATTTGTTCTTTTCTGGTTTAAANA---------------- 215 consensus_11890#2 GATACTTATAGGGATATGCAACTCACCCTTCAAAGGCATGGAACATGGGCTTCTGCCTGG 195 * ** * consensus_11890#0 GGTCTGAATGCGCTCTATGGGAGGTACAATGTCCGTCGTTCTTTCTGGGCTAGCAAATGG 948 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 GTCAGCGAAAGCGGAGGTGTATTCAACAATG----------------------------- 226 consensus_11890#0 AACTCTACAAATGCATATAATTTTGTAAAATACACAATCTCAAAGGGATATCCAGTTGAC 1008 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TCATGGGAATATGGTAATGAACTGAGCGGGCATGGAATTGG-GGCAAGAGTCGATG--CT 1065 consensus_11890#3 -------------GTAATGAACTGAGCGGGCATGGAATTGG-GGCAAGAGTCGATG--CT 234 consensus_11890#1 -------------GCAAAACCCTTGGAATGTAAGCCTTTAG-AATGTAAAAGAATGGAGT 262 consensus_11890#5 -------------GCCAAACCCTTGGGATGTAAGCCTTTAG-AATGTTAAAGAATGGAGT 75 consensus_11890#4 -------------GCAAAACCCTTGGAATGTAAGCCTTTAG-AATGTAAAAGAATGGAGT 261 consensus_11890#2 -------------GCGGTGAACTTGTGTCAAACACTTTCATCAATAGCATCTGGTATCTT 273 * ** * * * * * consensus_11890#0 ACACTGTATGGAA-AAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGC 1124 consensus_11890#3 ACACTGTATGGAA-AAGATGCAATTGAACTTAAATCCATCTTTCAACAGTTGTACAAGGC 293 consensus_11890#1 GTTCCATTTGTTC-GTTTTCTGGTTTGAATAGCAAA-GCCTTTAGAATGTAAAAGAATGT 320 consensus_11890#5 GTTCCCTTTGTTC-GTTTTCTGGTTTGAATAACAAA-GCCTTTAGGATGTTAAAGAATGT 133 consensus_11890#4 GTTCCATTTGTTC-GTTTTCTGGTTTGAATAACAAA-GCCTTTAGAATGTAAAAGAATGT 319 consensus_11890#2 GATCAGCTTGGAATGGCATCTAAGTACAATACAAAA--ATATTCTGCAGGCAGACTCTGA 331 * ** * * * * * ** * * * consensus_11890#0 ACCACTCTCCCAGCCATCCCTGTTAG-CCCCTGGAGGATTCTTTGATCAGCAGTGGTACA 1183 consensus_11890#3 ACCACTCTCCCAGCCATCCCTGTTAG-CCCCTGGAGGATTCTTTGATCAGCAGTGGTACA 352 consensus_11890#1 ACCAAAACCCTTCGAATACAAGAAGGATCCCAAGAATTTACCTTAGAATGCATAGAACGA 380 consensus_11890#5 TCCAAAACCCTTCGGATTCAAGAAGGGTCCCAAGGATTTTCCT----------------- 176 consensus_11890#4 ACCAAAACCCTTCGAATACAANAAGGATCNCAAGAATTTNCCTTAAAAAAAAAAAAAAAA 379 consensus_11890#2 TTGGTGGCCACTATGGTCTACTTGACACCCAAACTTTTTTGCCAAATCCTGATTACTATA 391 * * * * consensus_11890#0 CTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCATCATATTTATA 1243 consensus_11890#3 CTCAGCTACTTCAGACTTCTGGTCATGGCGTTGTCAGTGCTTTGACGCA----------- 401 consensus_11890#1 TTACAAGAATTTAAACATATTGTAAGTAAATTACAAGAATGTAAACAGATTTTGAGTAAA 440 consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 AAAAAAAAAAA------------------------------------------------- 390 consensus_11890#2 GTGCTCTACTATGG-CATCGGCTTATGGGCAGGGAAG----------------------- 427 consensus_11890#0 ATCTTGGTGGAGGGAATGATGCCCACCTTATAAGGAAGATATTAGATCCAAAGTATTTAG 1303 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 TAACAATTGAATTGTGAGCAAAAAAAAAAAAAAA-------------------------- 474 consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ATCGTTCAGAAGATACTTATAGGGATATGCAACTCGCCCTTCAAAGGCATGGAACATGGG 1363 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 CTTCTGCCTGGGTCAGCGAAAGCGGAGGTGTATTCAACAATGGCGGTGAACTTGTGTCAA 1423 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ACACTTTCATCAATAGCATCTGGTATCTTGATCAGCTTGGAATGGCATCTAAGTACAATA 1483 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 CAAAAATATTCTGCAGGCAGACTCTGATTGGTGGCCACTATGGTCTACTTGACACCCAAA 1543 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 CTTTTTTGCCAAATCCTGATTACTATAGTGCTCTACTATGGCATCGGCTTATGGGCAGGG 1603 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 AAGTTCTTTCAGTTGATATCAATGCGCCGCGTAAACTGCGTGCTTATGCTCATTGCAGGA 1663 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 AACAGCAGCAAGGAATCACCCTCCTGTTGATCAACCTGAGCAATACCACCGGATACAACG 1723 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TCACCCTCCAGAATGACATCAATGTCAACCTTGACAAAACAGCCAGCCTTCATAAGCACA 1783 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ATTCTTTCTCACACAGCCTCAGAAGAGCGGTTTCATGGCTGGGGCGCAAGCCGTCAAGCG 1843 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ACGTCGCGAGGAGGGAGGAGTACCACCTGACGGCCAAGGACGGCGACCTCCAGAGCAAGA 1903 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 CGATGCTGCTCAACGGCGCACCGCTGGAACTCTCGGACGACGGCGGCGTTCCGGCCATGA 1963 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 GCCCTGCGCTCGTTGCTGTCAACTCGCCGGTGTACCTGGCACCGACATCGATCGCCTTTG 2023 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TAGTTCTTCCAATGTTTGAGGCCAAGGCCTGTTCTTGAGTGATCAATCTTGCCTTCTTGT 2083 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TGAGTATTACGCCCTTAGAATGTTCCATTTGTTCTTTTCTGGTTTAAATAGCAAAACCCT 2143 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TGGAATGTAAGCCTTTAGAATGTAAAAGAATGGAGTGTTCCATTTGTTCGTTTTCTGGTT 2203 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TGAATAACAAAGCCTTTAGAATGTAAAAGAATGTACCAAAACCCTTCGAATACAAGAAGG 2263 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 ATCACAAGAATTTACCTTAGAATGCATAGAACGATTACAAGAATTTAAACATATTGTGAG 2323 consensus_11890#3 ------------------------------------------------------------ consensus_11890#1 ------------------------------------------------------------ consensus_11890#5 ------------------------------------------------------------ consensus_11890#4 ------------------------------------------------------------ consensus_11890#2 ------------------------------------------------------------ consensus_11890#0 TAAATTACAAGAATGTAAACAGGTTTTGAGTAAATAACAATTG 2366 consensus_11890#3 ------------------------------------------- consensus_11890#1 ------------------------------------------- consensus_11890#5 ------------------------------------------- consensus_11890#4 ------------------------------------------- consensus_11890#2 ------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||