These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11916#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2441 fasta sequence [TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGAGGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTTCAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTGCAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGTTCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGATGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAATTCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCATTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGCCACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTAGTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAACCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGCTCCTGTACTACACACCTGTGTCCATCCTTGCATCAATCATTCTGTCAGCTCTTCCAGGATTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCCTCACATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGCACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT] [+] EMBL AK067353 [TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGAGGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTTCAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTGCAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGTTCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGATGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAATTCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCATTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGCCACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTAGTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAACCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGCTCCTGTACTACACACCTGTGTCCATCCTTGCATCAATCATTCTGTCAGCTCTTCCAGGATTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCCTCACATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGCACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGT ] [+] EMBL CB683667 [ AGATCTTCATTGGACCAGTTGCCATTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAGCGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCACTTTGCATTTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGTTCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAACTGAAGGGGCTGCTTGGACTTATTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCATTTCACGAAACATGGCATCCGGATAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAATAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCTCGTATTAATGCAAGTTCTGTCGAGCAGATATATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTCTTCAGCGATCAATGGATATCGGTTGGACGGAAATAACGAAATGGTAGCCATGGGCTTCATGAATA ] [+] EMBL AU030962 [ CTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCTATGTAGCNACAGGTTCATTCTCGCGCACA NTGTGAACTTCGCTGC ] [+] EMBL AU030961 [ TTCACG AACACCGACTTTACTGCCCGTACGCATTGAAACATCATCCCTTTGCTCCNTCAACTCCAGTCCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGANCCCGAGGCATTTTGCTCGGTCGTTCTTGACATTTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCNTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTAaaaaa ] [-] EMBL CB679410 [ CATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAACCATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCCCCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGCCACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCCCTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAATTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT] consensusID : consensus_11916#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 959 fasta sequence [TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCCTCATTTGATCTGAAGTTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTCTTGCATGCATGCTTATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAGCTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTAAAAAAAAAGA] [+] EMBL CB679409 [TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCCTCATTTGATCTGAAGTTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTCTTGCATGCATGCTTATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAGCTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTG ] [-] EMBL CB683205 [ CAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTGTTGGGGGAAGACGAACTGTGTCTGTCTGAACTTAGTATGCCGAGTTCGTCTAAATTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCAGGTTTTAAGTGTTGGAACTAAAAAAAAAGA] consensusID : consensus_11916#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 605 fasta sequence [GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGNGNACAGCTGTGAAC] [+] EMBL CF196843 [GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCATCATGCTATGTAGCAACAGGTTCATTCTCGNGNACAGCTGTGAAC] [+] EMBL CF196541 [ AAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTCACGAAACAGATGTTACCTAAGCGTGCTTTTGCCCCATTAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGGCATGTAACGACAGTGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTGTACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATCTCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTCTGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACGGAAATNNNNNAATGGTAGCAATGGGCTTCATGAATATAGCNNNATCCTTATCATCATGCTATGTNNNANCAGGTTCAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11916#0 TCACCTGAAGCACCTAAGGTTCACATGGACTTGCCATCCTCACAGCTCACCAATCTTGGA 60 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 GGCACCGATACATTGTGATGGAATTTCAGCCACTTCCTCAGGGAGTTCACCCAAACACTT 120 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CAGAACCAGCCATGGAGCCCATGGCAAGTGAGTCATCTGTGCCCATAGGGACAGCTTTTG 180 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CAGACTTGCTGCTGCAAGGGCCAGAGCACCCAAGCCTGTGGAATGATCTCACCGGCATGT 240 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TCAGGAAGGCATTCCGTTGGCAAGGTGCAGACAAGCGCTTCACACTGTCTGTGTATGTGA 300 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TGTCTGTTCTACAGGGTCTGTTTCCAATACTTGACTGGTGGAAAACCTACAATCTGAAAT 360 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TCTTTCGAAGTGACCTCATGGCTGGCCTAACTCTTGCAAGCCTTAGCATTCCACAGAGCA 420 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TTGGATATGCAACTCTGGCAAAACTGGATCCTCAGTATGGTCTTTATACAAGTGTTGTGC 480 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CACCTCTTGTATATGCTGTGACGGGGTCCTCTAGGGAGATAGCCATTGGACCAGTTGCCA 540 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TTGTGTCATTATTGCTTTCATCAATGATTCAGAAGATAGTTGACCCATCTGTTGATCCAG 600 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CGTTCTACCGAAAAATGGTCTTTACCGTGACATTCCTTACTGGTGTCTTTCAGTTTGCAT 660 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TTGGTCTGTTCAGACTGGGATTTCTTGTGGATTTTCTATCACATGCTGCTATCGTCGGGT 720 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TCATGGGAGGAGCTGCTATTGTGATTGGATTACAGCAGCTGAAGGGGCTGCTTGGACTTA 780 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 GTCATTTTACAAATAGAACTGATGTCGTCTCTGTCACCAAGGCAGTCTGGGTTTCAGTTC 840 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 ACGAAACATGGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTG 900 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CCATGAGATTCATTGGAAGGAAGTACAAGAAACTCTTTTGGGTCTCTGCCATTGCACCTG 960 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TACTATCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCG 1020 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TGAAGATTATACAAAAAGTGAATTCAGGTATTAATGCAAGTTCTGTCGAGCAGATAGATC 1080 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TCAAAGGAGGCTATGCTGCCGAATGTGCAAAGATTGCTCTTGTTTGTGCTGTGATTGCTC 1140 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAGCGATCAATGGATATCGGTTGGACG 1200 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 GAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCAGGATCCTTATCATCATGCT 1260 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 ATGTAGCAACAGGTTCATTCTCGCGCACAGCTGTGAACTTCGCTGCTGGTTGCAAGACAA 1320 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 CCGTTTCAAACATTATCATGGCTGCCACTGTGATGGTTGCCTTGGAGCTTCTCACAAAGC 1380 consensus_11916#1 ------------------------------------------------------------ consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TCCTGTACTACACACCTGTGTCCATCC-TTGCATCAATCATTCTGTCAGCTCTTCCAGGA 1439 consensus_11916#1 -TCGGATCAGTGGAGATTGGTCTTTCAGTTGCAGTACTGATCCC-TCATTTGATCTGAAG 58 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TTGATCAATGTGCAGGAAGTCCGCTTCCTGTGGAAAGTCGACAAGATGGACTTCC-TCAC 1498 consensus_11916#1 TTTACTACTGTATTTTTTTTTTCATTTTGATTCATCAGAAGTATGTTGAAGTTTCATTTC 118 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 ATGCATGGGATCATTCCTTGGTGTTCTATTCGGATCAGTGGAGATTGGTCTTTCAGTTGC 1558 consensus_11916#1 TTGCATG----CATGCTT----ATGCAATTCTGATTTGGTGGAGCTCTTCTTGCAG---- 166 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 ACTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCT 1618 consensus_11916#1 -CTTCTTGTTTCCTTTGCAAAGATCATTATACAGTCGATTTGGCCTCAAGTAGAGATTCT 225 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGA 1678 consensus_11916#1 TGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGA 285 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 AACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAG 1738 consensus_11916#1 AACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAG 345 consensus_11916#2 -------------GTCATTTTACAAATAGAACTGATGT-CGTCTCTGTCACCAAGGCAGT 46 * * *** ** *** * * * * ** *** * consensus_11916#0 TTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGT 1798 consensus_11916#1 TTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTTGCTCGGT 405 consensus_11916#2 CTGGGTTTCA-----GTTCACGAAACAGATGTTACCTAAGCGTG----CTTTTGCCCCAT 97 * * * * *** * * * * * **** * ****** * * consensus_11916#0 CGTTCTTGACATGTCAAATG---TGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGA 1855 consensus_11916#1 CGTTCTTGACATGTCAAATG---TGGTAAACATGGATACTTCAGGTCTTGTGGCGCTGGA 462 consensus_11916#2 TAATCCTTATATTTGAGCTGCCTTTGTATGCAATTTTATATCTGG-CATGTAACGACAGT 156 ** * * ** * * ** * *** ** ** ** ** * *** ** * consensus_11916#0 AGAA-CTGCACAAGGAGCTGGC---GTGTCTCGGCATCCAGATGGCTATAGCCA--AGCC 1909 consensus_11916#1 AGAA-CTGCACAAGGAGCTGGC---GTGTCTCGGCATCCAGATGGCTATAGCCA--AGCC 516 consensus_11916#2 GGCATCCGGAGAACGTCTTCATTGGATGTTCCTTTTTCATGTTCATTCTTGCCATGAGAT 216 * * * * * ** * * *** * ** * * * * **** ** consensus_11916#0 TGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGG 1969 consensus_11916#1 TGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGG 576 consensus_11916#2 TCATTGGAAGGAAGTACAAGAAACTCTTTTGG---GTCTCTGCCATTGCACCTGT-ACTA 272 * *** *** * ** * * *** * *** * * * * * * * consensus_11916#0 ATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAA 2029 consensus_11916#1 ATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAA 636 consensus_11916#2 TCAGTTGCACTATCTACTCTGTTTGTCTATGCGACAAGAGCGGATAAGCACGGCGTGAAG 332 *** * * * * ** * * * ** ** **** *** consensus_11916#0 CGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATA 2089 consensus_11916#1 CGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATA 696 consensus_11916#2 ATTATACAAAAAGTG--AATTCAGGT--ATTA-ATGCAAGTTCTGTCGAGCAGATAGATC 387 ** ** * ** * * **** * *** ** * * * ** consensus_11916#0 AAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTG 2149 consensus_11916#1 AAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTG 756 consensus_11916#2 TCAAAGGAGGCTA-TGCTGCCGAATGTGCAA-AGATTGCTCTTGTT-TGTGCTGTGATTG 444 * ** *** **** * * ** * * * * * **** ****** ** consensus_11916#0 CACGATGATGCA-GCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTG 2208 consensus_11916#1 CACGATGATGCA-GCTTCAGCTGTAGTGTGGTGCTTCATGGATTGTGCGACGTGCAACTG 815 consensus_11916#2 CTC--TGACGGAAGCTGTTGCTGTTGGCCGCTCTTTTTCAG--CGATCAATGGATATCGG 500 * * *** * * *** ***** * * * ** * * * * * * * * consensus_11916#0 TTGGGGGAAGACGAACTGTGTCTGTC--TGAACTT----AGTATGCCGAGTTCGTCTAAA 2262 consensus_11916#1 TTGGGGGAAGACGAACTGTGTCTGTC--TGAACTT----AGTATGCCGAGTTCGTCTAAA 869 consensus_11916#2 TTGGACGGAAATAAGGAAATGGTAGCAATGGGCTTCATGAATATAGCNNNNTCCTTATCA 560 **** * * * * * * ** *** * *** * ** * * consensus_11916#0 TTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCA 2322 consensus_11916#1 TTCCCCACTATAGCTGTAGGTTTGTGATGTATCGGATGCATTTGTGAAGAGCAAATGCCA 929 consensus_11916#2 TCATGCTATGTAGCAACAGGTTCAT----TCTCGNGNACAGCTGTGAAC----------- 605 * * * **** ***** * * *** ** ****** consensus_11916#0 GGTTTTAAGTGTTGGAACTGATGATTGTGTAATATTATTATATTAATCGAGTTTGTATAA 2382 consensus_11916#1 GGTTTTAAGTGTTGGAACTAAAAAAAAAGA------------------------------ 959 consensus_11916#2 ------------------------------------------------------------ consensus_11916#0 TTAATTTGTACTCGAGTTTGTGCGTTTTGGCAAAATCCGAGCTAGTATGCTGCAAAATT 2441 consensus_11916#1 ----------------------------------------------------------- consensus_11916#2 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||