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Oryza sativa
cluster # 11918 cluster # 11918       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11918#0 length = 1791 sequences # 7  
consensus_11918#1 length = 746 sequences # 2  

consensusID : consensus_11918#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1791
fasta sequence
                              [ATTAGCCCAGGCGCCCAGCAGCAAGCTGTACCTAGCAAGCGACAATGGCTACGGGGGCGGCGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCCTCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCTACGGCGAGTGGGCCGTGGTCACCGGCCCGACGACGGGGCTCGGGCGATCCATGGCCATGGAGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAATTACAAGACTAATTACACAGATGGAGGCTAATTTGCAAAATGGATCTATTAACCCTAATTAGTCCATAATTTAACAATGTAGTGCTACACTAAATAAGTGCTAATCATAGACTAATTAGGCATAATAGATTCGTCTCGCCAAGTAGCCTCTATCTGTGTAATTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGACAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTTTTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTTTATTTTCTTTTTGCATATATAGTTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATAAAATATGGTTCTGTACATGTGTCCTTTTAATTATTGATATGTACTTCCTCTGTTTCACAATGTAAGTCATTCTAGTATTTCCAACATTTATATTAATGTTAATGAATCTAGATAGATATATATATGTCTAGATTTATTAACATTAATATAAATGTGGAAAATGATAGAATGACTTACATTGTGAAACGGGGGAGAACGTGTTATCCTTCCAAGTTATCCTTCCAATACTACTT]

[+] EMBL AK064965             [ATTAGCCCAGGCGCCCAGCAGCAAGCTGTACCTAGCAAGCGACAATGGCTACGGGGGCGGCGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCCTCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCTACGGCGAGTGGGCCGTGGTCACCGGCCCGACGACGGGGCTCGGGCGATCCATGGCCATGGAGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAATTACAAGACTAATTACACAGATGGAGGCTAATTTGCAAAATGGATCTATTAACCCTAATTAGTCCATAATTTAACAATGTAGTGCTACACTAAATAAGTGCTAATCATAGACTAATTAGGCATAATAGATTCGTCTCGCCAAGTAGCCTCTATCTGTGTAATTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGACAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTTTTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTTTATTTTCTTTTTGCATATATAGTTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATAAAATATGGTTCTGTACATGTGTCCTTTTAATTATTGATATGTACTTCCTCTGTTTCACAATGTAAGTCATTCTAGTATTTCCAACATTTATATTAATGTTAATGAATCTAGATAGATATATATATGTCTAGATTTATTAACATTAATATAAATGTGGAAAATGATAGAATGACTTACATTGTGAAACGGGGGAGAACGTGTTATCCTTCCAAGTTATCCTTCCAATACTACTT]
[+] EMBL CB658309             [                        GCTGCCCCTAGCAAGCGACAATGGCTACGGGGGCGGCGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCCTCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCTACGGCCAGTGGGCCGTGGTCACCGGCCCCACCACGGGGCTCGGGCGATCCATGGCCATGGAGCTCGCCCTCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCTGAGGCGACTCccc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB658308             [                        GCTGTACCTAGCAAGCGACAATGGCTACGGGGGCGGCGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCCTCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCTACGGCGAGTGGGCCGTGGTCACCGGCCCGACGACGGGGCTCGGGCGATCCATGGCCATGGAGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB659505             [                                                                                                                                                                                                                                      ATGGCCATGGAGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB655702             [                                                                                                                                                                                                                                                AGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCTGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAAGACAGGATGCTGCTGCCGGCGTTCGTGGCGACTGCCGACGACTACACGCGGGCGGCGGCGCTGTGGGTGGGGCACGGTCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCATTGGTACCTCGCCGCCTTCGTGCCAGACTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB655666             [                                                                                                                                                                                                                                                AGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCGAGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGTTCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGGCGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGGCGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCATGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTNTATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGGAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB655347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGGTGGCGATGATACGGGTGAACGCCATGGCGTTGACGGCGGTGACCCCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAGCCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTGTCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGAACAAGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_11918#0 ATTAGCCCAGGCGCCCAGCAGCAAGCTGTACCTAGCAAGCGACAATGGCTACGGGGGCGG CGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCC TCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCT ACGGCGAGTGGGCCGTGGTCACCGGCCCGACGACGGGGCTCGGGCGATCCATGGCCATGG AGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCG AGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGT TCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGG CGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGG CGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCA TGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAG CCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTG TCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACA AAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCT CCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACA CGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGC AGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCC GCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTG GCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTG AGCATTAAATATACACTAATTACAAGACTAATTACACAGATGGAGGCTAATTTGCAAAAT GGATCTATTAACCCTAATTAGTCCATAATTTAACAATGTAGTGCTACACTAAATAAGTGC TAATCATAGACTAATTAGGCATAATAGATTCGTCTCGCCAAGTAGCCTCTATCTGTGTAA TTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGA CAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTT TTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTT TATTTTCTTTTTGCATATATAGTTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGT TTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATAAA ATATGGTTCTGTACATGTGTCCTTTTAATTATTGATATGTACTTCCTCTGTTTCACAATG TAAGTCATTCTAGTATTTCCAACATTTATATTAATGTTAATGAATCTAGATAGATATATA TATGTCTAGATTTATTAACATTAATATAAATGTGGAAAATGATAGAATGACTTACATTGT GAAACGGGGGAGAACGTGTTATCCTTCCAAGTTATCCTTCCAATACTACTT



consensusID : consensus_11918#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 746
fasta sequence
                              [GTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAATTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGACAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTTTTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTTTATTTTCTTTTTGCATATATAGTTGTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGAT-CCCTGATGTATATATAAAATATGGTTCTGTACATTAAAAAGA]

[-] EMBL CB655667             [GTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAATTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGACAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTTTTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTTTATTTTCTTTTTGCATATATAGTTGTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGAT CCCTGATGTATATATAAAATATG                   ]
[-] EMBL CB655703             [  ACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATTGACGTGCAGCTGCAGGTGCCCTTGTACGTCCACACAAACATGCTGTCCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGAGACGGCCGACGATTACACGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATAGCCGTCCCGGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACTTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAATTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGACAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAATTGGCAGAAAATTTTTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTTTATTTTCTTTTTGCATATATAGTTGTTGCATATATGTTAATGGTTTAGTGTGGCGATGAAGTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAAT ATGCCCTGATGTATATATAAAATATGGTTCTGTACATTAAAAAGA]


>consensus_11918#1 GTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACAAAGGGAAGGGGATCGACGT GCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCTCCGCCGCCATCAAGGACAG GATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACACGCGGGCGGCGGCGCGGTG GGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGCAGCTGCAGTGGTTCCTCGC CGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCCGCAAGCACCTGCAGCACCG GGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTGGCCCTGTTTGGATATAGGG AAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTGAGCATTAAATATACACTAA TTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGA CAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTT TTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTT TATTTTCTTTTTGCATATATAGTTGTTGCATATATGTTAATGGTTTAGTGTGGCGATGAA GTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATA AAATATGGTTCTGTACATTAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11918#0      ATTAGCCCAGGCGCCCAGCAGCAAGCTGTACCTAGCAAGCGACAATGGCTACGGGGGCGG 60
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      CGCCGCTCTGGTTCACCTCGCTGGCCGGCCTCGGCGCCGCCTACCTCACCGTCGTCTTCC 120
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TCCGCCTCCTCCCTTACCTCGCCCTCTACCTCCGCCGGCCCAAGGACCTCCGCCGCTGCT 180
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      ACGGCGAGTGGGCCGTGGTCACCGGCCCGACGACGGGGCTCGGGCGATCCATGGCCATGG 240
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      AGCTCGCCCGCCGCGGCTTCAACCTCGTCCTCCTCGACCTCGATCGGGATAACCTCCGCG 300
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      AGGTGTCGGAGGCGATTCGCGAGGCCCACGCCGGCGCGGTGGCCACCAGGACGGTGGTGT 360
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TCGACCTGTCGACCGTCGGCACCGGCGCCGGCGAGGAGGGGATGCGGCGGCTGAGGGAGG 420
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      CGGTGGACGGGGTGGAGGTCGGGATGCTGGTGAACAACGCCGCCGTGGCGAGGCCCGGGG 480
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      CGCTCTACTTTCACGAGGCCGACGTGGAGCGGCTGGTGGCGATGATACGGGTGAACGCCA 540
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TGGCGCTGACGGCGGTGACCGCCGCCGTGCTGCCGGCGATGGCGAGGCGCGGCCGGGGAG 600
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      CCATCGTCAACGTCGGCTCCGGCTCCACCGTCGCCGTCCCGTCTTTTCCCTTGTACACTG 660
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TCTACAGCTCCACCAAACGGTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACA 720
consensus_11918#1      -------------------GTACGTGGAGCAGCTGTCGAAGAGCCTGTACGTGGAGTACA 41
                                          *****************************************

consensus_11918#0      AAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCT 780
consensus_11918#1      AAGGGAAGGGGATCGACGTGCAGCTGCAGGTGCCCTTCTACGTCCACACAAACATGCTCT 101
                       ************************************************************

consensus_11918#0      CCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACA 840
consensus_11918#1      CCGCCGCCATCAAGGACAGGATGCTGCTGCCGGCGTTCGTGGCGACGGCCGACGACTACA 161
                       ************************************************************

consensus_11918#0      CGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGC 900
consensus_11918#1      CGCGGGCGGCGGCGCGGTGGGTGGGGCACGGCCACATCGCCGTCCCCGACGCCGGCCAGC 221
                       ************************************************************

consensus_11918#0      AGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCC 960
consensus_11918#1      AGCTGCAGTGGTTCCTCGCCGCCTTCGTGCCGGACTTCGCCCACGACTGGTATCGCCTCC 281
                       ************************************************************

consensus_11918#0      GCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTG 1020
consensus_11918#1      GCAAGCACCTGCAGCACCGGGCCATCCTCTGGAACCTCATTTAATTTCATCCATATTTTG 341
                       ************************************************************

consensus_11918#0      GCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTG 1080
consensus_11918#1      GCCCTGTTTGGATATAGGGAAGTTTAGTCTGTCACATTAAATATTTGGGCACTAATCTTG 401
                       ************************************************************

consensus_11918#0      AGCATTAAATATACACTAATTACAAGACTAATTACACAGATGGAGGCTAATTTGCAAAAT 1140
consensus_11918#1      AGCATTAAATATACACTAATTA-------------------------------------- 423
                       **********************                                      

consensus_11918#0      GGATCTATTAACCCTAATTAGTCCATAATTTAACAATGTAGTGCTACACTAAATAAGTGC 1200
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TAATCATAGACTAATTAGGCATAATAGATTCGTCTCGCCAAGTAGCCTCTATCTGTGTAA 1260
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TTAGTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGA 1320
consensus_11918#1      ---GTTTTGTAAGTAGTCTGTGTTTAATACTTCAAATTAATGTTTAAATATCTAATGTGA 480
                          *********************************************************

consensus_11918#0      CAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTT 1380
consensus_11918#1      CAGTGACGAGCTAAAGTTTAATCACTAGATCCAAACAAGCCCTTAACTGGCAGAAAATTT 540
                       ************************************************************

consensus_11918#0      TTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTT 1440
consensus_11918#1      TTTTTTACCTCAAATCTCTTGAACAATCCACCAGTCAATCAAGCAATATATATGCATTTT 600
                       ************************************************************

consensus_11918#0      TATTTTCTTTTTGCATATATAGTT--TGCATATATGTTAATGGTTTAGTGTGGCGATGAA 1498
consensus_11918#1      TATTTTCTTTTTGCATATATAGTTGTTGCATATATGTTAATGGTTTAGTGTGGCGATGAA 660
                       ************************  **********************************

consensus_11918#0      GTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATA 1558
consensus_11918#1      GTTTGTGAGTGTGTTACTCCACCAACTAAGGTTTAAATAATGATCCCTGATGTATATATA 720
                       ************************************************************

consensus_11918#0      AAATATGGTTCTGTACATGTGTCCTTTTAATTATTGATATGTACTTCCTCTGTTTCACAA 1618
consensus_11918#1      AAATATGGTTCTGTACATTAAAAAGA---------------------------------- 746
                       ******************                                          

consensus_11918#0      TGTAAGTCATTCTAGTATTTCCAACATTTATATTAATGTTAATGAATCTAGATAGATATA 1678
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      TATATGTCTAGATTTATTAACATTAATATAAATGTGGAAAATGATAGAATGACTTACATT 1738
consensus_11918#1      ------------------------------------------------------------
                                                                                   

consensus_11918#0      GTGAAACGGGGGAGAACGTGTTATCCTTCCAAGTTATCCTTCCAATACTACTT 1791
consensus_11918#1      -----------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)