These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11933#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1891 fasta sequence [ACTACTCTTCTTCTTCCGCAGCGGCAGCCGCCTCCGCCTCCGGCCCCGCGCTCGCTGGCTAGGGTTAGGGTTTAGCCTCTCCCCCTCCCCCTATTCCTTTCGATGGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCT-CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAGATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAATGGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTCTGATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCATGGAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAAGCAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTTCCCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTCATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAAGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAGTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGATTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTTTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAGATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAAGGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGG-CCCGCGCAATTGCGCGGC-TAGCATTCATACATAATTATCGGTTTTTTTACATATAATATTACTTGAA] [+] EMBL AK101449 [ACTACTCTTCTTCTTCCGCAGCGGCAGCCGCCTCCGCCTCCGGCCCCGCGCTCGCTGGCTAGGGTTAGGGTTTAGCCTCTCCCCCTCCCCCTATTCCTTTCGATGGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCAGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCT CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCGCAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCAC CACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAGATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAATGGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTCTGATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCATGGAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAAGCAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTTCCCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTCATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAAGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAGTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGATTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTTTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAGATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAAGGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGG CCCGCGCAATTGCGCGGC TAGCATTCATACATAATTATCGGTTTTTTTACATATAATATTACTT ] [+] EMBL CB656817 [ CCCCTATTCCTTTCGATGGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCT CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCACCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCG ] [+] EMBL CB656791 [ CCCCCCTTCCTTTCGATGGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCCCCGACTCCGACGACCCCGACGACCTCCGCCGGCCTCCACTCCCTCGCCGACCCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCCCAGTCTCTCCCGCTTCTCCGca ] [+] EMBL CB656790 [ CCCCTATTCCTTTCGATGGATGCGGCGCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCTTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCT CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAGATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAAAAGCGCCTGGGCAACATCCATGGAGTCCACCGC ] [+] EMBL AK106522 [ GCACAAGCGCAAGCGGCCGGACGCCGACGACGACGGCGCTGCGGGGGCGGTGGACCTCTCCTCCCTGGAGGGCGCCGACGACGTGGAGGTGCTCGACCTCCGCGCCGCCAAGCGCCTCCTGCTCGCCTTCGAGCGCCGCCTGCGCGACAACCTCGAGGCCCGCATGAAGCACCCCGACGACCCCGCCCGCTTCGCCGACTCCGAGATCGCCCTCCACGCCGAGACCGACCGCCTCCGCCTCCTCGCCGGCGCCCCGGACCTCCTCCCGGACCTCGTCCCCCTCGGCCTCGCCTCCTCCCTCTCCTCCCTCCTCACCCACGACAACGCCGACCTCGCCGCCGCCGCTGCCTCCCTCCTCGCCGACCTCACCGACTCCGACGACCCCGACGACCT CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAGATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAATGGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTCTGATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCATGGAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAAGCAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTTCCCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTCATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAAGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAGTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGATTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTTTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAGATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACGAAGGATGACGTTAAGGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGG CCCGCGCAATTGCGCGGC TAGCATTCATACATAATTATCGGTTTTTTTACATATAATATTACTT ] [+] EMBL CB659551 [ GACGACCT CGCCGGCCTCCACTCCCTCGCCGACGCCCTCGTCGAAGCCAACGCCCTCGACCTCCTCGTCCACAATCTCTCCCGCTTCTCCGAGGCCGACCCCGACGAAGCCGAGGCTGTCCACCACACCCTCTCTGTCGTTGAAAACCTCCTCGAGCTCCGCCCCCAACTCGCCGACATTGTCTGCGACCGCACCAAGCTTCTCCGCTGGCTCCTCGCCCGCCTCAAGGCCCGCGAGTTCGATGCCAACAAGCAGTACGCCTCCGAGATCCTCGCCATCCTCCTACAGGACAGCCCCGCCAACCAGAAGCGCCTGGGCAACATCAATGGAGTCGACGGCCTGCTGCAGGCCGTTGCCATGTACAAGTCCAGGGACCCAAAGACCTCTGATGAGGAGGAGATGCTCGAGAACCTCTTCGATTGCCTCTGCTGTGTGCTCATGCCCATGGAGAACAAGGAAAGATTTGTCAAGGCGGAGGGCGTCGAGCTCATGATCATCATCATGAAGCAGAAGAAGCTGGCATACAGCTCTGCCATCCGGACCCTCGATTTTGCCATGACTAGGTTCCCACCTGCTTGCGAGCGCTTTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTCATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAAGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATCGATGTG ] [-] EMBL CB659552 [ TTGTTGATGTACTTGGGCTGAAGACCGCTTTTGCTGCGTTCATGGGTAAGATTCCTGTGAACAAGAAAAACAAAAAAGAGAGTTATCAGGAAGCACTAGAAGAACGGGTCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAGTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGATTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTTTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAGATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAAGGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGG CCCGCGCAATTGCGCGGC TAGCATTCATACATAATTATCGGTTTTTTTACATATAAacaaaaaagaa] [+] EMBL AU075602 [ TCATTTCACTAATTGCTTCATTGTTTGGTGGTATTACAAAAGGTTCACGAAGAATCAGGTTACTAGGAAAATTTGTTGAGAATGAATGTGAAAAGATAGACCGTTTGATGGAGTTTTACACAAGGTATTCAGAAAGAGTGAAAGCTGAGACTGAAAGACTTGACAGTCTTGATTTAGATGATCTAGAGATGGATGAAGATGAGCGCTACAATCGCAAGCTAGAAGCTGGTCTTTACACACTTCAGTTAATTGCACTTATTCTGGGGCATATATGGCACTCTGGCAATTCACAGATGAGAACAAGAATAGAGTTGCTTCTAAGACAGAACAAACTGACTAAGGATGACGTTAAGGATATACTTGAGGAGTATCATGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGCGTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGGNCNCGCGCAATTGCGCGGC TAGCATTCATACATAATTATCGGTTTTTTTACAAAAAAa ] [+] EMBL AU075665 [ TGACAACATTGGAGATCTGGATGGGCCTGAAGAGAAGGAAAGAGCGCAAGGGCGGACAAAAGAGATCATAGCATCTTTATCTTTGTGATGCGTACTCTATTTTGCGTCATCACCAGTCCACCACCCTGTAACCAAAACCAATGGTGTTGTAGCTCCTCTCATCTTGACAAGACGGACTATCATATGATGACTTGTGCGTAGGTTTGGTTGCGTTGCAGGGTATTCTTTTTGTAAACTAGTAATATAACTAGCTGGGTGG CCCGCGCAATTGCG GCCTTAGCATTCATACATAATTATCGGTTTTTTTACAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||