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Oryza sativa
cluster # 11935 cluster # 11935       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11935#0 length = 1057 sequences # 5  
consensus_11935#1 length = 590 sequences # 1  
consensus_11935#2 length = 443 sequences # 1  
consensus_11935#3 length = 421 sequences # 1  
consensus_11935#4 length = 264 sequences # 1  

consensusID : consensus_11935#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1057
fasta sequence
                              [GGGGGGACGGACAAGGGGGGGAGAAAAACATGGCAAGTGTAGAGGAAAGCTGGAGATTGAAACGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATTTAGTGGAGTTGACAGTAAAACATGAGAAACTAAAGGAAGAGCATGATTCTTTCCGTGATATTGCTGATAGAATGCTTGAAGAGAAGGACCGGGAGGTGGCTAAGCTCCTCAGGGAAAACAAGGATCTACATAACTCTTTAGAGGCTAAAGCGGCAGTTAGCATCAATGGTAATCAAAATCCAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCCTTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAGCACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATATGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTG-CCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGT-CAGCATGGCGTCCTTT-CAGCTGTGGCTTCATCGCCAGCAACT-G-CGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAAAGGATG-CTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGGAAATGAAATGCGCCAATTTTGCCTTCAAAAAAAAAAAAAAGA]

[+] EMBL CA766707             [GGGGGGACGGACAAGGGGGGGAGAAAAACATGGCAAGTGTAGAGGAAAGCTGGAGATTGAAACGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATTTAGTGGAGTTGACAGTAAAACATGAGAAACTAAAGGAAGAGCATGATTCTTTCCGTGATATTGCTGATAGAATGCTTGAAGAGAAGGACCGGGAGGTGGCTAAGCTCCTCAGGGAAAACAAGGATCTACATAACTCTTTAGAGGCTAAAGCGGCAGTTAGCATCAATGGTAATCAAAATCCAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCCTTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAGCACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATATGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTG CCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGT CAGCATGGCGTCCTTT CAGCTGTGGCTTCATCGNCAGCAACT G CGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTANCTGGGGGTAGCCGGAAA                                                                                                                                                                                                                                                                      ]
[-] EMBL CB668934             [                                                                                                                                                                                                                                                                                           CAATGGTAATCAAAATCCAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCCTTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAGCACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATATGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTG CCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGT CAGCATGGCGTCCTTT CAGCTGTGGCTTCATCGCCAGCAACT G CGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAGAGGATG CTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGGAAATGAAATGCGCCAATTTTGCCTTCAAAAAAAAAAAAAAGA]
[-] EMBL CB628908             [                                                                                                                                                                                                                                                                                               GGTAATCAAAATCCAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCCTTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAGCACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATATGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTG CCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGT CAGCATGGCGTCCTTT CAGCTGTGGCTTCATCGCCAGCAACT G CGGTACCAGACGGTGGATCCACGCCAAATTCATTTTTTTCAAGATTCACATTTTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAAAGGATG CTGTTTGCACGAAATCCCAGCGGTTTTTTTGGCCATAGATGATTCTATTTGTTTATTATTTTTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAAC    ACTTCAAAGAAGGATGAAATGCGCCAATTTTGCCTTAAAAAAAAA        ]
[+] EMBL C74730               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCATGATCAACAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATATGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTG CCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGT CAGCATGGCGTCCTTT CAGCTGTGGCTTCATCGCCAGCAACTNG CGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATCCTAGCTGGGGGNA CCGGAAA GATGCCTGTTT CACG AATCCCAGNGG  TTTCGGGCCA NGATGATc                                                                                                                                                                                                                    ]
[+] EMBL C96667               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAGAGATCACAAAAACGAG AGGAATAGATATGACANATCTAAAAAATGNTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTGNCCTGTGGTTGCAACATTACTGC ATTTAGCCCCGAAGAGCTAACGAAATGTCCAGCATGGCGTCCTTTCCAGCTGTGGCTTCATCGCCAGCAACT GCCGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAGAGGATG CTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAAaaaa                                                                                          ]


>consensus_11935#0 GGGGGGACGGACAAGGGGGGGAGAAAAACATGGCAAGTGTAGAGGAAAGCTGGAGATTGA AACGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATT TAGTGGAGTTGACAGTAAAACATGAGAAACTAAAGGAAGAGCATGATTCTTTCCGTGATA TTGCTGATAGAATGCTTGAAGAGAAGGACCGGGAGGTGGCTAAGCTCCTCAGGGAAAACA AGGATCTACATAACTCTTTAGAGGCTAAAGCGGCAGTTAGCATCAATGGTAATCAAAATC CAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCC TTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAG CACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAG CAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATA TGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGC TGCCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGTCAGCATG GCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGC CAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGC TGGGGGTAGCCGGAAAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGA TGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACT AGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATG AAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGGAAATG AAATGCGCCAATTTTGCCTTCAAAAAAAAAAAAAAGA



consensusID : consensus_11935#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [ATCACCAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGGGAGATCCCAAAAACGGGAAGGAATAGATATGCCATTTTTAAAAAATGTTTTCCTAAAGTTTTTGGAAACAGGGGAAGTGGGAGCATTGCTCCCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGTCAGCATGGGGTCCTTTCAGCTGTGGTTTCATCGCCAGCAACTGCGGTCCCAGACGGTGGATCCCCCCCAAATTCATTTTTTTCAAGATTCCCATTTTAGCAGAGGTACATAGATTTGCCATTTTAGCTGGGGGTACCCGGAGAGGATGCTGTTTCCACGAAATCCCAGCGGTTTTTTTGCCCATAGAGGATTTTATTTGTTTATTATTTTTAGGTCGCCACTTCCTTTCGTCCCATTTTGTAAAATTAGTGTATATAAAATTATGACCATTATAAGCAATTTTATCCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCACCCCTTCAAAGGCAAATGAAATGCACCGATTTTCCCTTCAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CB627800             [ATCACCAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGGGAGATCCCAAAAACGGGAAGGAATAGATATGCCATTTTTAAAAAATGTTTTCCTAAAGTTTTTGGAAACAGGGGAAGTGGGAGCATTGCTCCCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGTCAGCATGGGGTCCTTTCAGCTGTGGTTTCATCGCCAGCAACTGCGGTCCCAGACGGTGGATCCCCCCCAAATTCATTTTTTTCAAGATTCCCATTTTAGCAGAGGTACATAGATTTGCCATTTTAGCTGGGGGTACCCGGAGAGGATGCTGTTTCCACGAAATCCCAGCGGTTTTTTTGCCCATAGAGGATTTTATTTGTTTATTATTTTTAGGTCGCCACTTCCTTTCGTCCCATTTTGTAAAATTAGTGTATATAAAATTATGACCATTATAAGCAATTTTATCCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCACCCCTTCAAAGGCAAATGAAATGCACCGATTTTCCCTTCAAAAAAAAAAAAAAAAAAAAA]


>consensus_11935#1 ATCACCAGGAAGCAATGTTGAAGACTGAGCTCCGCAATATGGGGAGATCCCAAAAACGGG AAGGAATAGATATGCCATTTTTAAAAAATGTTTTCCTAAAGTTTTTGGAAACAGGGGAAG TGGGAGCATTGCTCCCTGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGA AATGTCAGCATGGGGTCCTTTCAGCTGTGGTTTCATCGCCAGCAACTGCGGTCCCAGACG GTGGATCCCCCCCAAATTCATTTTTTTCAAGATTCCCATTTTAGCAGAGGTACATAGATT TGCCATTTTAGCTGGGGGTACCCGGAGAGGATGCTGTTTCCACGAAATCCCAGCGGTTTT TTTGCCCATAGAGGATTTTATTTGTTTATTATTTTTAGGTCGCCACTTCCTTTCGTCCCA TTTTGTAAAATTAGTGTATATAAAATTATGACCATTATAAGCAATTTTATCCCTAAAGTG GAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCACCCCTTCAAA GGCAAATGAAATGCACCGATTTTCCCTTCAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11935#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [GCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGCAAATGAAATGCGCCAATTTTGCCTTCAAGGATGTTAATTTTGTGCTTACAGGTGGTCAGCGTTAATTTTGATGTGTGTGCAGTGTGCT]

[-] EMBL AU181871             [GCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGCTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGCAAATGAAATGCGCCAATTTTGCCTTCAAGGATGTTAATTTTGTGCTTACAGGTGGTCAGCGTTAATTTTGATGTGTGTGCAGTGTGCT]


>consensus_11935#2 GCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGC CAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAGC TGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGA TGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACT AGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAGTGGAAGGGATAATG AAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGGCAAATG AAATGCGCCAATTTTGCCTTCAAGGATGTTAATTTTGTGCTTACAGGTGGTCAGCGTTAA TTTTGATGTGTGTGCAGTGTGCT



consensusID : consensus_11935#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 421
fasta sequence
                              [CTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTNCCCTGTGGTTGCAACATTACTGCAATTTANCCCCGAAGAGCTAACGAAATGTCAGCATGGCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGNCATTCTAGCTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU056624             [CTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTNCCCTGTGGTTGCAACATTACTGCAATTTANCCCCGAAGAGCTAACGAAATGTCAGCATGGCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGCCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGNCATTCTAGCTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTATATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11935#3 CTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGCTNCCCTGT GGTTGCAACATTACTGCAATTTANCCCCGAAGAGCTAACGAAATGTCAGCATGGCGTCCT TTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACGCCAAATTC ATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGNCATTCTAGCTGGGGGT AGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAGATGATTCT ATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGTCACATTTTGTAAAACTAGTGTAT ATAAAATTATGAACATTATAAGCAATTTTATGCCTAAAAAAAAAAAAAAAAAAAAAAAAA A



consensusID : consensus_11935#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 264
fasta sequence
                              [GCCATCCATGACCTTCAAATTGCTCAATCCAAATATGGTGAAGAGATTGAAGCAAGGGATTTGGCTCTCGCTGGATTCTGACAAAAAGTTAAAGAATGGTCATGGCAAAATTGGATTCTCTTACTTCTAAATTCCTTTCCGAAAAAGAATCATGGGAGAAAAACGTGGCAAGTGTAGAGGGAAAGCTGGAGATTGGAAATGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATTTAGTGGG]

[+] EMBL AU056623             [GCCATCCATGACCTTCAAATTGCTCAATCCAAATATGGTGAAGAGATTGAAGCAAGGGATTTGGCTCTCGCTGGATTCTGACAAAAAGTTAAAGAATGGTCATGGCAAAATTGGATTCTCTTACTTCTAAATTCCTTTCCGAAAAAGAATCATGGGAGAAAAACGTGGCAAGTGTAGAGGGAAAGCTGGAGATTGGAAATGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATTTAGTGGG]


>consensus_11935#4 GCCATCCATGACCTTCAAATTGCTCAATCCAAATATGGTGAAGAGATTGAAGCAAGGGAT TTGGCTCTCGCTGGATTCTGACAAAAAGTTAAAGAATGGTCATGGCAAAATTGGATTCTC TTACTTCTAAATTCCTTTCCGAAAAAGAATCATGGGAGAAAAACGTGGCAAGTGTAGAGG GAAAGCTGGAGATTGGAAATGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGA TGAACTTAAGAAGAATTTAGTGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      GGGGGGACGGACAAGGGGGGGAGAAAAACATGGCAAGTGTAGAGGAAAGCTGGAGATTGA 60
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      AACGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTAAGAAGAATT 120
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      TAGTGGAGTTGACAGTAAAACATGAGAAACTAAAGGAAGAGCATGATTCTTTCCGTGATA 180
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      TTGCTGATAGAATGCTTGAAGAGAAGGACCGGGAGGTGGCTAAGCTCCTCAGGGAAAACA 240
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      AGGATCTACATAACTCTTTAGAGGCTAAAGCGGCAGTTAGCATCAATGGTAATCAAAATC 300
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      CAGGACCTGCTAAACAGGATGCAATGGACATTGAACTGGCTGAGCAGCAAATTCTGCTCC 360
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------------------
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      TTGCACGGCAACAGGCACAAAGAGAAGAGGAATTGGCTCAATCACAGAGGCATATATTAG 420
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      ------------------------------------------------ATCACCAGGAAG 12
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      CACTTCAACAAGAAATTGAGGAGCTTGAGCGTGAGAACCGCCTTCATGATCAACAGGAAG 480
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      CAATGTTGAAGACTGAGCTCCGCAATATGGGGAGATCCCAAAAACGGGAAGGAATAGATA 72
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      CAATGTTGAAGACTGAGCTCCGCAATATGGAGAGATCACAAAAACGAGAAGGAATAGATA 540
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      TGCCATTTTTAAAAAATGTTTTCCTAAAGTTTTTGGAAACAGGGGAAGTGGGAGCATTGC 132
consensus_11935#3      --------CTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGC 52
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      TGACATATCTAAAAAATGTTATCCTAAAGCTTCTGGAAACAGGGGAAGTGGGAGCATTGC 600
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      TCCC-TGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGTCAGCAT 191
consensus_11935#3      TNCCCTGTGGTTGCAACATTACTGCAATTTANCCCCGAAGAGCTAACGAAATGTCAGCAT 112
consensus_11935#2      ------------------------------------------------------------
consensus_11935#0      TGCC-TGTGGTTGCAACATTACTGCAATTTAGCCCCGAAGAGCTAACGAAATGTCAGCAT 659
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      GGGGTCCTTTCAGCTGTGGTTTCATCGCCAGCAACTGCGGTCCCAGACGGTGGATCCCCC 251
consensus_11935#3      GGCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACG 172
consensus_11935#2      -GCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACG 59
consensus_11935#0      GGCGTCCTTTCAGCTGTGGCTTCATCGCCAGCAACTGCGGTACCAGACGGTGGATCCACG 719
consensus_11935#4      ----------------------------------------------GCCATCCATGACCT 14
                                                                      *  *  **   * 

consensus_11935#1      CCAAATTCATTTTTTTCAAGATTCCCATTTTAGCAGAGGTACATAGATTTGCCATTTTAG 311
consensus_11935#3      CCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGNCATTCTAG 232
consensus_11935#2      CCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAG 119
consensus_11935#0      CCAAATTCATTCTTCTCAAGATTCACATTCTAGCAGAGGTACATAGATTTGACATTCTAG 779
consensus_11935#4      TCAAATT-GCTCAATCCAAATATGGTGAAGAGATTGAAGCA-AGGGATTTGGC--TCTCG 70
                        ******   *     ***   *            ** * * *  ****** *  * * *

consensus_11935#1      CTGGGGGTACCCGGAGAGGATGCTGTTTCCACGAAATCCCAGCGGTTTTTTTGCCCATAG 371
consensus_11935#3      CTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAG 292
consensus_11935#2      CTGGGGGTAGCCGGAGAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAG 179
consensus_11935#0      CTGGGGGTAGCCGGAAAGGATGCTGTTTGCACGAAATCCCAGCGGTTTTTCTGGCCATAG 839
consensus_11935#4      CTGGATTCTGACAAAAAGT-TAAAGAATGGTCATGGCAAAATTGGATTCTCTTACT-TCT 128
                       ****       *  * **  *   *  *   *        *  ** ** * *  *  *  

consensus_11935#1      AGGATTTTATTTGTTTATTATTTTTAGGTCGCCACTTCCTTTCGT-CCCATTTTG---TA 427
consensus_11935#3      ATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGT-CACATTTTG---TA 348
consensus_11935#2      ATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGT-CACATTTTG---TA 235
consensus_11935#0      ATGATTCTATTTGTTTATTATTTCTAGGTCGCCACTTCCTCTCGT-CACATTTTG---TA 895
consensus_11935#4      AAATTCCTTTCCGAAAAAGAATCATGGGAGAAAAACGTGGCAAGTGTAGAGGGAAAGCTG 188
                       *   *  * *  *   *  * *  * **     *         **    *        * 

consensus_11935#1      AAATTAGTGTATATAAAATTATGACCATTATAAGCAATTT-TATCCCTAAAGTGGAAGGG 486
consensus_11935#3      AAACTAGTGTATATAAAATTATGAACATTATAAGCAATTT-TATGCCTAAAAAAAAAAAA 407
consensus_11935#2      AAACTAGTGTATATAAAATTATGAACATTATAAGCAATTT-TATGCCTAAAGTGGAAGGG 294
consensus_11935#0      AAACTAGTGTATATAAAATTATGAACATTATAAGCAATTT-TATGCCTAAAGTGGAAGGG 954
consensus_11935#4      GAGATTGGAAATGTGAGTCTGTGAAGGCTGAGAGCAATGGGCATGCTGGAGATGAACTTA 248
                        *  * *   ** * *   * ***    *   ******    ** *   *     *    

consensus_11935#1      ATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCACCCCTT----CAAAGG 542
consensus_11935#3      AAAAAAAAAAAAAA---------------------------------------------- 421
consensus_11935#2      ATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGG 354
consensus_11935#0      ATAATGAAATAGTGGGATCGGCAGAAATATGTTATGTATTTGCAACACTTACTTCAAAGG 1014
consensus_11935#4      AGAAGAATTTAGTGGG-------------------------------------------- 264
                       * **  *   *                                                 

consensus_11935#1      CAAATGAAATGCACCGATTTTCCCTTCAAAAAAAAAAAAAAAAAAAAA------------ 590
consensus_11935#3      ------------------------------------------------------------
consensus_11935#2      CAAATGAAATGCGCCAATTTTGCCTTCAAGGATGTTAATTTTGTGCTTACAGGTGGTCAG 414
consensus_11935#0      GAAATGAAATGCGCCAATTTTGCCTTCAAAAAAAAAAAAAAGA----------------- 1057
consensus_11935#4      ------------------------------------------------------------
                                                                                   

consensus_11935#1      -----------------------------
consensus_11935#3      -----------------------------
consensus_11935#2      CGTTAATTTTGATGTGTGTGCAGTGTGCT 443
consensus_11935#0      -----------------------------
consensus_11935#4      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)