These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1002 fasta sequence [GGACTGAAGGAGTAACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC--------GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG-AATTTTGTTTGGACCAAGGT-CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC-TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATAAAAAATATCACGCTTTTTGGAAAAA] [+] EMBL CF294540 [GGACTGAAGGAGTAGAAAATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCCGGTATTTAGGTAATTAGGTTTGTGCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATC ] [+] EMBL AK066998 [ ACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATTATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG AATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTAT ] [+] EMBL CF282375 [ ACGCATACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCC ] [+] EMBL CF327042 [ TACTCTCCCCTCTGACTCTTTGCGCCAAGTCAATCTCCCCGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCCGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATG AATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCC ] [+] EMBL CF282118 [ CGTCTGTCTTCTCGGCCTCAACTCCCGTCTCCTCGCTAGTTCGCCCGCCGCGCCGCCTGCGTCGATTTCAGTCCATCCTGCGGAGGGGAGCAGCGGTGGGTGCCGTCCTCCTGCTGCTTCCGCCTCC GGTAATTAGGTTTGTTCGTTGAGACGACATGCCTAAGATAAAGACAAGCCGTGTCAAGTATCCTGAAGGATGGGAGCTTATAGAACCAACTCTGCGTGATTTGGAAGCCAAGATGAGGGAAGCCGAGAATGATCCACATGATGGGAAGAGGAAGTGCGAAGCTCTCTGGCCAATCTTTCGTATTTCTCATCAAAAAAGCCGTTACATATATGATCTTTACTATCGAAGAAAGGAGATATCAAAAGAGCTGTATGNAATTTTGTTTGGACCAAGGT CATGCTGATAAAAATCTGATCGCGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTCTTGTAGGGTCCCCAAGCACCTCAG ] [+] EMBL BM419372 [ GGTCCATCCTGATAAAAATCTGATC CGAAGTGGAAAAAGCCAGGTTATGAGCGTCTTTGCTGCCTCCGATGCATACAGACACGAGACCACAACTTTGCGACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCATTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAGTGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACCCTTCCTTGCTAaaaaaaaaa ] [-] EMBL CF294541 [ ATGCATACAGACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACCCTTGGGCTATGGCATGTGCCTGGTGAGTAATGACGATTTCTCAACATAAAGAGTTCGCAAATGGTTCAGTAAAAAATAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTAAAACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATAAAAAATATCACGCTTTTTGGAAAAA] [-] EMBL CF282119 [ GACACGAGACCACAACTTTGCAACCACTTGTGTC TGTAGGGTCCCCAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACCAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAATATACTGTATCACGCTTaaaaaaaaa ] [-] EMBL CF282376 [ CAAGCACCTCAGGGAAGAAAAGGTTATAGAGTGTGTCCATTGTGGGTGCAGAGGGTGTGCCAGTGGTGATTGAAGTCGCTGTCCTGTGGCTACAAATAATCTGAGAGTAATCGCTCGAGATGTTTCCTTGTGTTTGATCTCTGTTAAGACAAGCACCATATGACCATATAATCAGGCGATTCGTGTGGTGTACTGTAAACTCTTGGGCTATGGCATGTGTCTGGTGAGTAATGACGATTTCTCAACATGTTGTGTTCGCAAATGGTTCAGTAGAAACTAGCTGGAAGTTTGATGGATTACTGTACCCCGCTAGACCTACTTACTACAATACTACTGTATGAACACTTCCTTGCTACAGAGGTATTAGGATGATGTTGAGTTATCAGGTTTTCTGCAAAAAAAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||