These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11952#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 400 fasta sequence [TTTTTTCTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG-GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA-GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA-GGGAGAT-CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGCTTG] [+] EMBL CF314563 [TTTTTTCTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGCTT ] [-] EMBL CF314564 [ TTTTTCTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGCTTG] [+] EMBL CF314007 [ TTTTTTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGC ] [+] EMBL CF337516 [ TTTTTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGGGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAAGGGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGAGGGGAGATNCGGCAATAGCCGGTGGTGGCTGCCATGGTAAAAGAGAGAGAGAGCTT ] [+] EMBL CF322005 [ TTTCTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGCT ] [-] EMBL CF314006 [ TTTTTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCGNGT GCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCA GGTAGAAGAGAGAGAGAGCT ] [-] EMBL CF322004 [ TTCTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGAGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAGAGAGAGAGCTT ] [-] EMBL CF318055 [ TTTTTCTCCTTCCTCCCGTCTTCTTTCTTCTCCTCTTCCGTTGGCAGCGAGAGAGGGAGAAGAGGGGACGAGCGGGGCGCCGGCCCTCCG GTGGCCGAAACGCGGCGACGTCGGCAACATAACATGTTCCCCGTCGACGCGCATCCGGGGACGGCAGAGGTCGGCAGTGGAAGTGAGATATGAAGCCGGAACGGCGGCGGCAAAAGCTTGCTCCGGCCGGTAAAAGAAGTGGCTATAGTGGCTTATAGGACGGCTAA GGGAGAGGGGAAACTAGAAAAATGGGTTCACCTCATCAAGGCAAGCCCGGTGGCGCGAGGGTTTGTCCGGCAATGCTCCGGTGA GGGAGAT CGGCAATAGCCGGTGGTGGCTGCCATGGTAGAAGAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||