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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11954#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1993 fasta sequence
[CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG-CAGCCGGA-GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC-TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA-GCAAGTGAAGCTATCAAATGC-TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG-----TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTTTCGGTGTTC]
[+] EMBL C27805 [CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTG GCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGG AGNCAG CGGANGCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTNGGTAGGAGGACTAGGAGTGCGGCNGCTCGGGGAGAGGCTTCCAATGGAAAGCNCCACCGGGGAAGAAGG ]
[+] EMBL AU160985 [ TCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCG ]
[+] EMBL AK101878 [ GTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCT ]
[+] EMBL AK102523 [ CACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAGTTTTTTTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTT ]
[+] EMBL AK106531 [ ACCAAATTCCCCCAAATCGCAGCTGTTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCAGATCCATCTCGGGTTCCTCCCGCCGTTGGCAG CAGCCGGA GCTTTTTTCCGCGGAAGAAATGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTAGGAGTGCGGCGGCTCGGGGAGAGGC TGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGGCTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCGAGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTCCACATGTCAA GCAAGTGAAGCTATCAAATGC TGGAGGGAGGCTAATAATTGCATCAGATGGAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAGAGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACACCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAGATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTGGGAGTCTATCAACAGCGCAGATGAAAATTTCTGTTTGCACTGGGAAGATAGCTCACAGGATTTCAACCCCGTAG TTTTTTTTTTTTTTGAACCTTAGTATGTAAAGTGAAATGTCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGAATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCTATCCTAATCAATGGTAATGTCTTTCGGTGTTC]
[-] EMBL AU093318 [ CGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCCTCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCGCCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGGAGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGCCGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGGCATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTGTTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGGACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGGTCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTGGATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAAGTCATTGTGCCAATTCCACATGTCAAGGCAAGTGAAGCTATCAAATGCTTGGAGGGAGGCTAATAATTGCATCAGATGGAAATTGGG ]
[+] EMBL OSC28311 [ naactanCCTGTNTGGTTATTGATATCATCCCATCTGATCATTCTTCAACACCTNCATCACTATCTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTTCTGTTGGAAAGCTTGGAAACAAGTCTGCTNCATTTGACTCTGTGGAGGAATTATTTGAAGAGGGTTCCGCAATGATGGATGAAAGGTTGGGTAGGAATTTCCCATCAAAAGCAAACTCGTCCCCATCTCGCTGTGCAATCT ]
[-] EMBL C28488 [ TTTAGTG CAG TAA NGA GTGGTT CTG TCTGCCCCATCGACACCAT GGTTGGCCCTTA CCTTG TCAGATTGT GGAAAAAGAAGGATGCAATGGAAGGTAAAAGANCTAGNCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGG CCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATNATAATCTGTTTGCTGCTGGAACCAAGTATTATTGGTG ]
consensusID : consensus_11954#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence
[GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTGTTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTATTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATTTCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACATTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCCTCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTAGATTCTTAACTCTCTTTC]
[+] EMBL BE039649 [GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTTCAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGTGCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTTCGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATTATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTGTTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTATTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATTTCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACATTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCCTCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTAGATTCTTAACTCTCTTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11954#0 CTCAGTTCGGTACTTCTTCTTCCTTCACTCTCCCCACCAAATTCCCCCAAATCGCAGCTG 60
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 TTCGCCACCCGCATTGCGCCGCCATTGCCTCCAAATCCGAGTACTCCTTGAGTAATCTCA 120
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 GATCCATCTCGGGTTCCTCCCGCCGTTGGCAGCAGCCGGAGCTTTTTTCCGCGGAAGAAA 180
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 TGGCGCCGTTTCGGTGAGTTCTTGGCAGTTTGGGATGATGCTTGGTGGGTAGGAGGACTA 240
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 GGAGTGCGGCGGCTCGGGGAGAGGCTGCGATGGAGAGCGCCGCCGGGGAGGAGGGGAAGG 300
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CTGCCCCGTCGCTTCCCCTGGCGACCCTGATCGGCCGCGAGCTCCGCGGCGGCGGCTCCG 360
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 AGCGGCCGCTCGTCCGGTACGGCCACTTCGGCTTCGCCAAGCGCGGCGAGGACTACTTCC 420
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 TCGTCAAGCCCGACTGCCTCCGCGTCCCGGGCGACCCTTCCTCCGCCTTCTCCGTCTTCG 480
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CCGTGTTCGACGGACACAATGGCGTGTCGGCGGCGGTGTTCAGCAAGGAGCACCTGCTGG 540
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 AGCACGTGATGAGCGCCGTGCCGCAGGGCATCGGCCGCGACGACTGGCTGCAGGCGCTGC 600
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CGCGCGCGCTGGTCGCGGGCTTCGTGAAGACGGACATCGACTTCCAACGCAAGGGGGAGG 660
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CATCAGGGACGACAGCGACGCTGGTCGTCGTCGATGGGTTCACGGTCACGGTGGCGTCTG 720
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 TTGGGGACTCCAGGTGCATATTGGACACGCAGGGCGGTGTGATCTCGCTGCTAACCGTGG 780
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 ACCATCGTCTCGAGGAGAATGTAGAGGAGCGGGAGCGCGTCACCGCGAGTGGAGGGGAGG 840
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 TCAGCCGGCTCAACCTGTGTGGTGGACAGGAGGTGGGACCTCTCAGATGCTGGCCAGGTG 900
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 GATTGTGCCTTTCAAGATCGATTGGGGATACTGACGTTGGGGAGTTCATTGTGCCAATTC 960
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CACATGTCAAGCAAGTGAAGCTATCAAATGCTGGAGGGAGGCTAATAATTGCATCAGATG 1020
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 GAATTTGGGATGCACTGTCCTCAGAAGCTGCTGCTCAGGCATGCCGAGGATTGCCTGCAG 1080
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 AGCTGGCTGCAAAGCTTGTCGTGAAGCAAGCACTGAAGACAAGTGGGCTGAAAGATGACA 1140
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CCACCTGTGTGGTTGTTGATATCATCCCATCTGATCATTCTTCAACACCTCCATCACTAT 1200
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CTCCAAAGAAAAACCAGAACAAGTTGAGATCTCTTCTTTTTGGTAGGAGGTCACATAGTT 1260
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CTGTTGGAAAGCTTGGAAACAAGTCTGCTTCATTTGACTCTGTGGAGGAATTATTTGAAG 1320
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 AGGGTTCCGCAATGTTGGATGAAAGGTTGGGTAGGAATTTTCCATCAAAAGCAAACTCGT 1380
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 CCCCATCTCGCTGTGCAATCTGCCAAGTGGATCAAGCACCTTTTGAAGATTTAGTGACAG 1440
consensus_11954#1 ------------------------------------------------------------
consensus_11954#0 ATAATGGAGGTGGTTGCTGTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTT 1500
consensus_11954#1 ------------------GTTCTGCCCCATCGACACCATGGGTTGGCCCTTATCTTTGTT 42
******************************************
consensus_11954#0 CAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGT 1560
consensus_11954#1 CAGATTGTAGGAAAAAGAAGGATGCAATGGAAGGTAAAAGATCTAGTCGCTCAACAGCGT 102
************************************************************
consensus_11954#0 GCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTT 1620
consensus_11954#1 GCAGGTGAAATTGCCAATAGGACTAACTGGTCCTTGTTCGTGCAAACTGGTCTCCTGGTT 162
************************************************************
consensus_11954#0 CGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATT 1680
consensus_11954#1 CGGTTGTCTGCCACATGTAAAAAGAGGATAATAATCTGTTTGCTGCTGGATCCAAGTATT 222
************************************************************
consensus_11954#0 ATTGGTGAAACTAACTGCAATCTAGCCTGAACTGAACAAATTGGGCTACTAACAATCTTG 1740
consensus_11954#1 ATTGGTGAAATTAACTGCATTCTATCCTGAACTGAACATATTGGTCTACTAACATTTTTG 282
********** ******** **** ************* ***** ********* * ***
consensus_11954#0 GGAGTCTATCAA-CAGCGCAGATGAAA-ATTTCTGTTTG---CACTGGGAAGATAGCTCA 1795
consensus_11954#1 TTAGTTTATTAATCATCTCACTTTTATCATTTTTCTTTGTTTCTCTCTTTTTTTTTTTTA 342
*** *** ** ** * ** * * **** * **** * ** * * *
consensus_11954#0 CAGGAT-TTCAACCCCGTAGTTTTTTTTTTTTT-TGAACCTTAGTATGTAAAGTGAAATG 1853
consensus_11954#1 TTTTATCTTTTATTTCATCCTCTCTCTCTTCCTCTGCCTCCCCTCTTTTTCCTTCTAATT 402
** ** * * * * * * * ** * ** * * * * ***
consensus_11954#0 TCTAGCTTAACAATGTTTGTAAGAGATGGCAATTGGCAAGGCTCCTTGTTCTACCTTGGA 1913
consensus_11954#1 TCTAACTGTGCTCCTTCTTTCTTCATTTTTATTTTATTTATTTTTTCCCCTTTTATAACA 462
**** ** * * * * * * ** * * * * *
consensus_11954#0 ATGTATATGCTTGTGGAGCCGAACAGACTAATTTATTTATCTCATGCT--ATCCTAATCA 1971
consensus_11954#1 TTTTCCTTCTTCACGAAACTCCCCTCCCCCATCTTTTCTCCTCTCTCTTTATCCTCTTCC 522
* * * * * * * * * ** * ** *** ** ***** **
consensus_11954#0 ATGGTAATG--TCTTTCGGTGTTC------------------------------------ 1993
consensus_11954#1 TCTCTCTTTCTTTTTTCGTTTTTCTTCTTTTTTCTTTCGTCTCTCCTTTCTTTCTCCTTA 582
* * * ***** * ***
consensus_11954#0 ------------------
consensus_11954#1 GATTCTTAACTCTCTTTC 600
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||