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Oryza sativa
cluster # 11969 cluster # 11969       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11969#0 length = 1739 sequences # 4  
consensus_11969#1 length = 1546 sequences # 1  
consensus_11969#2 length = 789 sequences # 1  
consensus_11969#3 length = 664 sequences # 1  
consensus_11969#4 length = 502 sequences # 2  

consensusID : consensus_11969#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1739
fasta sequence
                              [TCGTCTCCAAACCCTTCCCAAAACCCTACTCCGCGCACGCGCCTCTCCTTCTAGAACCTTCTGGAACCCTCGCCCCCGCGAAGGCGGCGCCG-CCGCCGAGATGGCCTCCTCCCCCTCCGCCGTCGTCCTGCAGGCCGCCCTCGACGGCGACCTCCACCTCCTGTGTGAAATGGCCAAGAAGTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGAGACACCAATACTTCTCGCCGCATGTGACGGGGACATTAATGTTTTAATATACCTTCTTGATCATGGTGGTGACCCAGCCATACC-TAACGCGGGGGGCTTCATGCCGCTGCAC-TACGCAGCAGAGTACGGGCATGTTGATGTTGTGAGACTATTGCTGTCCAAAGGAG-TTCATGTGGATCCTCTGAATTATAGTGGGGCCCCGCTGCACTTGGCTACCGCAAATGACCATGATCAGGTTGCGAAGGTTCTGCTTGAGCATGGTGCTGATCCCAACAGAGTTGTCAACCATGTCCTTTCACCACTCGTTGTTGCTTGCTGCAGCCACTCCTTGAAATGCATGAAGTTACTGATCAAGGCTGGTGCTGATGTGAATGATAGAAGTTCTACTGGACCAAGAACGACCCCTTTAGTGCTTGCAGTTGATGATGGATCAGCCGATATTGTCAAAATCTTGCTAGAGGCTGGAGCTGACCCTAACATTCGTAACGAG--TGGGAGGATTCCTATCATGATGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTGTTTCCTAGGACAAAACCAATTCCATGTCTGCCAGATTGGAGTGTTGATGGGATAATTAGAACTATGAGATTCACACGTACCGAACCTGAGGATGCAGTTCCTGTGGAAATACTAGTATCTGATTCGAAGTTAAATGCCAAGGAAGCATTTGCAGAGGGTGAATACATTACAGCAATCTACTTCTACACCAAGGCACTGGAAAAAGCCCCACTTGATGCCACCTTGTTCGCCAACCGCAGCCTCTGCTGGCTGCGGCTGCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCC-TGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGAGAAGCGGCGGCGGCTTTCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAGCTGCACTTGTCTTCCCTTTGTGTGCGACTCTAATGCAAGCGCAGACTGGCAGCATGATATTTGTATATGATATATGTGAAGTCCGGCAGT]

[+] EMBL AK101252             [TCGTCTCCAAACCCTTCCCAAAACCCTACTCCGCGCACGCGCCTCTCCTTCTAGAACCTTCTGGAACCCTCGCCCCCGCGAAGGCGGCGCCG CCGCCGAGATGGCCTCCTCCCCCTCCGCCGTCGTCCTGCAGGCCGCCCTCGACGGCGACCTCCACCTCCTGTGTGAAATGGCCAAGAAGTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGAGACACCAATACTTCTCGCCGCATGTGACGGGGACATTAATGTTTTAATATACCTTCTTGATCATGGTGGTGACCCAGCCATACC TAACGCGGGGGGCTTCATGCCGCTGCAC TACGCAGCAGAGTACGGGCATGTTGATGTTGTGAGACTATTGCTGTCCAAAGGAG TTCATGTGGATCCTCTGAATTATAGTGGGGCCCCGCTGCACTTGGCTACCGCAAATGACCATGATCAGGTTGCGAAGGTTCTGCTTGAGCATGGTGCTGATCCCAACAGAGTTGTCAACCATGTCCTTTCACCACTCGTTGTTGCTTGCTGCAGCCACTCCTTGAAATGCATGAAGTTACTGATCAAGGCTGGTGCTGATGTGAATGATAGAAGTTCTACTGGACCAAGAACGACCCCTTTAGTGCTTGCAGTTGATGATGGATCAGCCGATATTGTCAAAATCTTGCTAGAGGCTGGAGCTGACCCTAACATTCGTAACGAG  TGGGAGGATTCCTATCATGATGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTGTTTCCTAGGACAAAACCAATTCCATGTCTGCCAGATTGGAGTGTTGATGGGATAATTAGAACTATGAGATTCACACGTACCGAACCTGAGGATGCAGTTCCTGTGGAAATACTAGTATCTGATTCGAAGTTAAATGCCAAGGAAGCATTTGCAGAGGGTGAATACATTACAGCAATCTACTTCTACACCAAGGCACTGGAAAAAGCCCCACTTGATGCCACCTTGTTCGCCAACCGCAGCCTCTGCTGGCTGCGGCTGCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCC TGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGAGAAGCGGCGGCGGCTTTCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAGCTGCACTTGTCTTCCCTTTGTGTGCGACTCTAATGCAAGCGCAGACTGGCAGCATGATATTTGTATATGATATATGTGAAGTCCGGCAGT]
[+] EMBL C97400               [                                 CGCACG NCCTCTCCTTCTAGAACCTTCTGGAACCCTCGCCCCCGCGAAGGCGACGCCGCCCGANGA ATGGCCTCCTCCCCCTCCGCCGTCGTCCTGCAGGCCGCCCTCGACGGCGACCTCCACCTCCTGTGTGAAATGGCCAAGAAGTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGAGACACCAATACTTCTCGCCGCATGTGACGGGGACATTAATGTTTTAATATACCTTCTTGATCATGGTGGTGACCCAGCCATACCTTAACGCGGGGGGCTTCATGCCGCTGCACTTACGCAGCAGAGTACGGGCATGTTGATGTTGTGAGACTATTGCTGTCCAAAGGAGTTTCATGTGGATCCTCTGAATTATAGTGGGGCCCCGCTGCACTTGGCTACCGCAAATGACCATGATCAGGTTGCGAAGGTTCTGCTTGAGCATGGTGCTGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF327620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTCCTTGAAATGCATGAAGTTACTGATCAAGGCTGGTGCTGATGTGAATGATAGAAGTTCTACTGGACCAAGAACGACCCCTTTAGTGCTTGCAGTTGATGATGGATCAGCCGATATTGTCAAAATCTTGCTAGAGGCTGGAGCTGACCCTAACATTCGTAACGAGGATGGGAGGATTCCTATCATGATGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTGTTTCCTAGGACAAAACCAATTCCATGTCTGCCAGATTGGAGTGTTGATGGGATAATTAGAACTATGAGATTCGCACGTACCGAACCTGAGGATGCAGTTCCTGTGGAAATACTAGTATCTGATTCGAAGTTAAATGCCAAGGAAGCATTTGCAGAGGGTGAATACATTACAGCAATCTACTTCTACACCAAGGCACTGGAAAAAGCCCCACTTGATGCCACCTTGTTCGCCAACCGCAGCCTCTGCTGGCTGCGGCTGCGAGAGGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTTGCGCCCTGGTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF327621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGAGAAGCGGCGGCGGCTTTCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATTTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAGCTGCACTTGTCTTCCCTTTGTGTGCGACTCTAATGCAAGCGCAGA                                             ]


>consensus_11969#0 TCGTCTCCAAACCCTTCCCAAAACCCTACTCCGCGCACGCGCCTCTCCTTCTAGAACCTT CTGGAACCCTCGCCCCCGCGAAGGCGGCGCCGCCGCCGAGATGGCCTCCTCCCCCTCCGC CGTCGTCCTGCAGGCCGCCCTCGACGGCGACCTCCACCTCCTGTGTGAAATGGCCAAGAA GTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAG CTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTC AGGCTCTCACAGAGGTGAGACACCAATACTTCTCGCCGCATGTGACGGGGACATTAATGT TTTAATATACCTTCTTGATCATGGTGGTGACCCAGCCATACCTAACGCGGGGGGCTTCAT GCCGCTGCACTACGCAGCAGAGTACGGGCATGTTGATGTTGTGAGACTATTGCTGTCCAA AGGAGTTCATGTGGATCCTCTGAATTATAGTGGGGCCCCGCTGCACTTGGCTACCGCAAA TGACCATGATCAGGTTGCGAAGGTTCTGCTTGAGCATGGTGCTGATCCCAACAGAGTTGT CAACCATGTCCTTTCACCACTCGTTGTTGCTTGCTGCAGCCACTCCTTGAAATGCATGAA GTTACTGATCAAGGCTGGTGCTGATGTGAATGATAGAAGTTCTACTGGACCAAGAACGAC CCCTTTAGTGCTTGCAGTTGATGATGGATCAGCCGATATTGTCAAAATCTTGCTAGAGGC TGGAGCTGACCCTAACATTCGTAACGAGTGGGAGGATTCCTATCATGATGGCAGCAGCTC GTGGTCAACGAGAGCTTGTTGAAATTCTGTTTCCTAGGACAAAACCAATTCCATGTCTGC CAGATTGGAGTGTTGATGGGATAATTAGAACTATGAGATTCACACGTACCGAACCTGAGG ATGCAGTTCCTGTGGAAATACTAGTATCTGATTCGAAGTTAAATGCCAAGGAAGCATTTG CAGAGGGTGAATACATTACAGCAATCTACTTCTACACCAAGGCACTGGAAAAAGCCCCAC TTGATGCCACCTTGTTCGCCAACCGCAGCCTCTGCTGGCTGCGGCTGCGAGAAGGAGACG TCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTGCGCCCTGGTTGGTCCAAGGCATGGT ACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGAGAAGCGGCGGCGGCTTTCA CGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGT TGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTG CTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCT CACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATCTAAACTGTTTAG CTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGT TCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTT TGATAGATTATTGTCGATACATATTGCAGCTGCACTTGTCTTCCCTTTGTGTGCGACTCT AATGCAAGCGCAGACTGGCAGCATGATATTTGTATATGATATATGTGAAGTCCGGCAGT



consensusID : consensus_11969#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1546
fasta sequence
                              [CCGCTTCCTCTCCTCTCCAAAACCCTCCCCAAAAACCACGCCCCCGCCTTCCAGAACCTTCTGGAACCGCGATGGCCCCCTCCCCTTCCGACGTCGCCCTGCAGGCCGCCCAGGACGGCAACCTCCGCCTCCTCAGGAAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCGATCGATGGGAACGTTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGGCATGATGAGGCTGTAAGACTATTGCTGTCCAAAGGAGTTCATGTGGATCCTCTGAATTATCGTGGGGCCCCACTGCACTTGGCTGCCTCAAAGGACCGGGTTCAAGCCATGAAGGTTCTGCTTGAACATGGTGCTGATCCCAACAGAGTTGTCAATCATATCTTTTCACCACTCATGATGGCATGCTGCGGGCACTCCTTGAAATGCGTGAAGCTACTTGTTGAGGCTGGCGCTGATGTGAACGGGGCTGGAGCTGACCCTAACATTCCTGACGAGGAAGGGAGGATTCCTATCATGGTGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAACCTATTCCATGTCTGCCAGATTGGAATGTTGACGGGATAATTAGAACTATGAGAACCACACGTATTGAACCTCAGTCTGCTATTCCTGTGGAAGAACAAGTGTCTGATGCAAAGTCGAAAGGAAAGGAAGCATTTGCAAAGGGTGACTACCTTACAGCCATCTACTTCTACACCCTGGCAATGGATAAATCCCCACTTGATGCCACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGGCAGCGAGAAGGGGACAGAGCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAAAGGAGCAGTGGACGCATTCGGGGAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGAACGCGTTAAGGGAGGCGATCGAGTGTCTGAAGAGAGCTGCTTGATCTGAAGATCCGAATAACCCTTGAGCAGCTACTGCATCGTCCTTTTGGCCTCACCTCACCTGTCAGACTGCTTCACATCTTTCCACTGTAACTACCAACGACTAGGTTTTGCAAACCATGCTGACTGTTTAGCTATCTCTGCTGTCAGAGTACGTATGGCAGGAACATGCACTGTCTTTCGGTCAGAAACCATATGGTTTGCTAGGTCATCATCACCCATACATATGCAGTTGCACTTTCTTCCATTTTGTGCGCAACTCATGCAAGTGCAAACTGGCAGTAATAGTATATGATATGTAAAGTTCGTCAGT]

[+] EMBL AK063560             [CCGCTTCCTCTCCTCTCCAAAACCCTCCCCAAAAACCACGCCCCCGCCTTCCAGAACCTTCTGGAACCGCGATGGCCCCCTCCCCTTCCGACGTCGCCCTGCAGGCCGCCCAGGACGGCAACCTCCGCCTCCTCAGGAAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCGATCGATGGGAACGTTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGGCATGATGAGGCTGTAAGACTATTGCTGTCCAAAGGAGTTCATGTGGATCCTCTGAATTATCGTGGGGCCCCACTGCACTTGGCTGCCTCAAAGGACCGGGTTCAAGCCATGAAGGTTCTGCTTGAACATGGTGCTGATCCCAACAGAGTTGTCAATCATATCTTTTCACCACTCATGATGGCATGCTGCGGGCACTCCTTGAAATGCGTGAAGCTACTTGTTGAGGCTGGCGCTGATGTGAACGGGGCTGGAGCTGACCCTAACATTCCTGACGAGGAAGGGAGGATTCCTATCATGGTGGCAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAACCTATTCCATGTCTGCCAGATTGGAATGTTGACGGGATAATTAGAACTATGAGAACCACACGTATTGAACCTCAGTCTGCTATTCCTGTGGAAGAACAAGTGTCTGATGCAAAGTCGAAAGGAAAGGAAGCATTTGCAAAGGGTGACTACCTTACAGCCATCTACTTCTACACCCTGGCAATGGATAAATCCCCACTTGATGCCACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGGCAGCGAGAAGGGGACAGAGCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAAAGGAGCAGTGGACGCATTCGGGGAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGAACGCGTTAAGGGAGGCGATCGAGTGTCTGAAGAGAGCTGCTTGATCTGAAGATCCGAATAACCCTTGAGCAGCTACTGCATCGTCCTTTTGGCCTCACCTCACCTGTCAGACTGCTTCACATCTTTCCACTGTAACTACCAACGACTAGGTTTTGCAAACCATGCTGACTGTTTAGCTATCTCTGCTGTCAGAGTACGTATGGCAGGAACATGCACTGTCTTTCGGTCAGAAACCATATGGTTTGCTAGGTCATCATCACCCATACATATGCAGTTGCACTTTCTTCCATTTTGTGCGCAACTCATGCAAGTGCAAACTGGCAGTAATAGTATATGATATGTAAAGTTCGTCAGT]


>consensus_11969#1 CCGCTTCCTCTCCTCTCCAAAACCCTCCCCAAAAACCACGCCCCCGCCTTCCAGAACCTT CTGGAACCGCGATGGCCCCCTCCCCTTCCGACGTCGCCCTGCAGGCCGCCCAGGACGGCA ACCTCCGCCTCCTCAGGAAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGA ATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCC TTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGT TCTATGCCGCGATCGATGGGAACGTTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTG ACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGGC ATGATGAGGCTGTAAGACTATTGCTGTCCAAAGGAGTTCATGTGGATCCTCTGAATTATC GTGGGGCCCCACTGCACTTGGCTGCCTCAAAGGACCGGGTTCAAGCCATGAAGGTTCTGC TTGAACATGGTGCTGATCCCAACAGAGTTGTCAATCATATCTTTTCACCACTCATGATGG CATGCTGCGGGCACTCCTTGAAATGCGTGAAGCTACTTGTTGAGGCTGGCGCTGATGTGA ACGGGGCTGGAGCTGACCCTAACATTCCTGACGAGGAAGGGAGGATTCCTATCATGGTGG CAGCAGCTCGTGGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAACCTATTC CATGTCTGCCAGATTGGAATGTTGACGGGATAATTAGAACTATGAGAACCACACGTATTG AACCTCAGTCTGCTATTCCTGTGGAAGAACAAGTGTCTGATGCAAAGTCGAAAGGAAAGG AAGCATTTGCAAAGGGTGACTACCTTACAGCCATCTACTTCTACACCCTGGCAATGGATA AATCCCCACTTGATGCCACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGGCAGCGAG AAGGGGACAGAGCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGTTGGTCCA AGGCATGGTACCGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAAAGGAGCAGTGG ACGCATTCGGGGAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGAACGCGTTAA GGGAGGCGATCGAGTGTCTGAAGAGAGCTGCTTGATCTGAAGATCCGAATAACCCTTGAG CAGCTACTGCATCGTCCTTTTGGCCTCACCTCACCTGTCAGACTGCTTCACATCTTTCCA CTGTAACTACCAACGACTAGGTTTTGCAAACCATGCTGACTGTTTAGCTATCTCTGCTGT CAGAGTACGTATGGCAGGAACATGCACTGTCTTTCGGTCAGAAACCATATGGTTTGCTAG GTCATCATCACCCATACATATGCAGTTGCACTTTCTTCCATTTTGTGCGCAACTCATGCA AGTGCAAACTGGCAGTAATAGTATATGATATGTAAAGTTCGTCAGT



consensusID : consensus_11969#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence
                              [ATTCCATGTTCTCCCAGATTTGGATTTTTTNAATGGGATTANTTTAGAACTTTTGAGAATCCACACGTACCGAACCTGGAGGAATGCCAGTTCCCTGTGNAAANACTAGTATCTGATTTCGAANTTAAATGCCCAAGGAAGCTTTGNCAGAGGTTGATTACATTACANCATTCTACTTCTAACACCAGGNCACTGGAAAAAGCCCCACTTGATGCCCACNTTGTTCGCCAACCGCAGCNTCTGCTGGCTNCGGCTNCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGTAGAAGCGGCGGCGGCTTTCCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAAAAAAAAAAA]

[+] EMBL C97401               [ATTCCATGTTCTCCCAGATTTGGATTTTTTNAATGGGATTANTTTAGAACTTTTGAGAATCCACACGTACCGAACCTGGAGGAATGCCAGTTCCCTGTGNAAANACTAGTATCTGATTTCGAANTTAAATGCCCAAGGAAGCTTTGNCAGAGGTTGATTACATTACANCATTCTACTTCTAACACCAGGNCACTGGAAAAAGCCCCACTTGATGCCCACNTTGTTCGCCAACCGCAGCNTCTGCTGGCTNCGGCTNCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGTAGAAGCGGCGGCGGCTTTCCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTGTTTCCCAAACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGTCGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAAAAAAAAAAA]


>consensus_11969#2 ATTCCATGTTCTCCCAGATTTGGATTTTTTNAATGGGATTANTTTAGAACTTTTGAGAAT CCACACGTACCGAACCTGGAGGAATGCCAGTTCCCTGTGNAAANACTAGTATCTGATTTC GAANTTAAATGCCCAAGGAAGCTTTGNCAGAGGTTGATTACATTACANCATTCTACTTCT AACACCAGGNCACTGGAAAAAGCCCCACTTGATGCCCACNTTGTTCGCCAACCGCAGCNT CTGCTGGCTNCGGCTNCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGC CCTGCGCCCTGGTTGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAA GAACTACAGTAGAAGCGGCGGCGGCTTTCCACGGAAGCGCTGAAACTTGACCCTGAGAAC TACGAGATCAAGATCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCT GAAGAAGATAAGAACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGAC CTCACCTTTCAGACTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACG GCCTGTTTCCCAAACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTTTGGT CGAAAAAAAAAACGTAGTAACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGAT CAAAATAGTTTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAA AAAAAAAAA



consensusID : consensus_11969#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [TTTTTTTTTTTTTGGGGGGGATGACGAATTCGGGTATTGATTTCGTACGGTTTGCTGGCTAGTTTAGATGGAAATCCTCCAATTCGAGGATAGATGGATTGGATTTACTCGATTTCTACGGTTTGGACTCCCATTTGTGCGGATTGCTGAATTAGCTACAGTATATTTTCCCCCCTTTTTTTAATCTGTTTGATTCACTTACGTGGCTGTGTTGTTCGGATTTTGCTGCTGCTGGTGGAATCGATCCTTTGTAGAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCGATCGATGGGAACATTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGTCTGCTTACTGTGCTCTTCGGTTCACTTGCCGGATCTGGATTTTAAGGATGGCTTATATGGCATTTCTTGCATACCAATGACATGATATCTGTCTGTGGATTATCTTGGTTGAACCTTTGTGCTAATTTT]

[+] EMBL CA759758             [TTTTTTTTTTTTTGGGGGGGATGACGAATTCGGGTATTGATTTCGTACGGTTTGCTGGCTAGTTTAGATGGAAATCCTCCAATTCGAGGATAGATGGATTGGATTTACTCGATTTCTACGGTTTGGACTCCCATTTGTGCGGATTGCTGAATTAGCTACAGTATATTTTCCCCCCTTTTTTTAATCTGTTTGATTCACTTACGTGGCTGTGTTGTTCGGATTTTGCTGCTGCTGGTGGAATCGATCCTTTGTAGAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCGATCGATGGGAACATTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGTCTGCTTACTGTGCTCTTCGGTTCACTTGCCGGATCTGGATTTTAAGGATGGCTTATATGGCATTTCTTGCATACCAATGACATGATATCTGTCTGTGGATTATCTTGGTTGAACCTTTGTGCTAATTTT]


>consensus_11969#3 TTTTTTTTTTTTTGGGGGGGATGACGAATTCGGGTATTGATTTCGTACGGTTTGCTGGCT AGTTTAGATGGAAATCCTCCAATTCGAGGATAGATGGATTGGATTTACTCGATTTCTACG GTTTGGACTCCCATTTGTGCGGATTGCTGAATTAGCTACAGTATATTTTCCCCCCTTTTT TTAATCTGTTTGATTCACTTACGTGGCTGTGTTGTTCGGATTTTGCTGCTGCTGGTGGAA TCGATCCTTTGTAGAGATGGCGAAGAAGTTGGATTTGCGAGGAGTCAAGGACAAGAATGG CCTAAGCGCGCTTCACTTCGCTGCAAGCCATGGGCACCTGGATTGCTGCAAGTTCCTTGT GGAGGAATCGGGCCTTGATGTCAACTCGGTTGGTCACAAAGGTGAAACGCCAGTGTTCTA TGCCGCGATCGATGGGAACATTCAGGTTTTGGGGTACCTTCTTGATCATGGTGGTGACCC GGTGAAACCCGAGGAGAGGGGCTGCACGCCGCTGCACAATGCGGCAGAGAATGGTCTGCT TACTGTGCTCTTCGGTTCACTTGCCGGATCTGGATTTTAAGGATGGCTTATATGGCATTT CTTGCATACCAATGACATGATATCTGTCTGTGGATTATCTTGGTTGAACCTTTGTGCTAA TTTT



consensusID : consensus_11969#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 502
fasta sequence
                              [TTTTTTTTTGGAGGCGAGCATCTCCCATTGATTCGGCAAGGTGCGATCGTGTGGTGTACTGGTTTGCAATGCACGATTCCGGATGTGGGGGGAAATCTGGGGTGGTTGCAGCTGCGATGTTCTCTGCGCGGTAGCTCATAGCAAAAATCTGGGTGGCGATTGACGAATCGGGTGTTGATTTCGTTCTGTTTGATCGCTGGTTTAGGTGGAAATACCTAATTGGGGGCTATGTGTATTGCATAGTTTGGAGATTTCTGAATTAGCCTTTTGTTTCCCCCAAATTTTCTGTTTGATTCACTCGCAATCTATCTATCTATCTATCCTGGGTAGAAATGGCCAAGAAGTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGCGTGCACATCAATGATTTCTCG]

[-] EMBL AU082971             [TTTTTTTTTGGAGGCGAGCATCTCCCATTGATTCGGCAAGGTGCGATCGTGTGGTGTACTGGTTTGCAATGCACGATTCCGGATGTGGGGGGAAATCTGGGGTGGTTGCAGCTGCGATGTTCTCTGCGCGGTAGCTCATAGCAAAAATCTGGGTGGCGATTGACGAATCGGGTGTTGATTTCGTTCTGTTTGATCGCTGGTTTAGGTGGAAATACCTAATTGGGGGCTATGTGTATTGCATAGTTTGGAGATTTCTGAATTAGCCTTTTGTTTCCCCCAAATTTTCTGTTTGATTCACTCGCAATCTATCTATCTATCTATCCTGGGTAGAAATGGCCAAGAAGTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGCGTGCACATCAATGATTTCTC ]
[-] EMBL OSC3351              [                                                           ctGTTT CAAT CACAAT  CGGATGT GGGGGAAATCT GGGTGGTTGCAACTGCAATGTTCCCTGCGCGGTAGCTCATAGCAAAAATCTGGGTGGCGATTGACGAATCGGNTGTTGATTTCGTTCTGTTTGATCGCTGGTTTAGGTGGAAATACCTAATTGGGGGCTATGTGTATTGCATAGTTTGGAGATTTCTGAATTAGCCTTTTGTTTCCCCCAAATTTTCTGTTTGATTCACTCGCAATCTATCTATCTATCTATCCTGGGTAGAAATGGCCAAGAAGTTGGA CTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTGCGTGCACATCAATGATTTCTCG]


>consensus_11969#4 TTTTTTTTTGGAGGCGAGCATCTCCCATTGATTCGGCAAGGTGCGATCGTGTGGTGTACT GGTTTGCAATGCACGATTCCGGATGTGGGGGGAAATCTGGGGTGGTTGCAGCTGCGATGT TCTCTGCGCGGTAGCTCATAGCAAAAATCTGGGTGGCGATTGACGAATCGGGTGTTGATT TCGTTCTGTTTGATCGCTGGTTTAGGTGGAAATACCTAATTGGGGGCTATGTGTATTGCA TAGTTTGGAGATTTCTGAATTAGCCTTTTGTTTCCCCCAAATTTTCTGTTTGATTCACTC GCAATCTATCTATCTATCTATCCTGGGTAGAAATGGCCAAGAAGTTGGACCTGCGGGGAT TCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAGCTATGGGCATCTGGAGA TCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTCAGGCTCTCACAGAGGTG CGTGCACATCAATGATTTCTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11969#0      TCGTCTCCAAACCCTTCCCAAAACCCTACTCCGCGCACGCGCCTCTCCTTCTAGAACCTT 60
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      -----------------------------CCGCTTCCTCTCCTCTCCAAAACCCTCCCCA 31
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CTGGAACCCTCGCCCCCGCGAAGGCGGCGCCGCCGCCGAGATGGCCTCCTCCCCCTCCGC 120
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      AAAACCACGCCCCCGCCTTCCAGAACCTTCTGGAACCGCGATGGCCCCCTCCCCTTCCGA 91
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CGTCGTCCTGCAGGCCGCCCTCGACGGCGACCTCCACCTCCTGTGTGAAATGGCCAAGAA 180
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      CGTCGCCCTGCAGGCCGCCCAGGACGGCAACCTCCGCCTCCTCAGGAAGATGGCGAAGAA 151
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      GTTGGACCTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCACTTGGCTGCAAG 240
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      GTTGGATTTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCACTTCGCTGCAAG 211
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CTATGGGCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTTGATGTCAACTC 300
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      CCATGGGCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTTGATGTCAACTC 271
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      AGGCTCTCACAGAGGTGAGACACCAATACTTCTCGCCGCATGTGACGGGGACATTAATGT 360
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      GGTTGGTCACAAAGGTGAAACGCCAGTGTTCTATGCCGCGATCGATGGGAACGTTCAGGT 331
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      TTTAATATACCTTCTTGATCATGGTGGTGACCCAGCCATACCTAACGCGGGGGGCTTCAT 420
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      TTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGCAC 391
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      GCCGCTGCACTACGCAGCAGAGTACGGGCATGTTGATGTTGTGAGACTATTGCTGTCCAA 480
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      GCCGCTGCACAATGCGGCAGAGAATGGGCATGATGAGGCTGTAAGACTATTGCTGTCCAA 451
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      AGGAGTTCATGTGGATCCTCTGAATTATAGTGGGGCCCCGCTGCACTTGGCTACCGCAAA 540
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      AGGAGTTCATGTGGATCCTCTGAATTATCGTGGGGCCCCACTGCACTTGGCTGCCTCAAA 511
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      TGACCATGATCAGGTTGCGAAGGTTCTGCTTGAGCATGGTGCTGATCCCAACAGAGTTGT 600
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      GGACCGGGTTCAAGCCATGAAGGTTCTGCTTGAACATGGTGCTGATCCCAACAGAGTTGT 571
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CAACCATGTCCTTTCACCACTCGTTGTTGCTTGCTGCAGCCACTCCTTGAAATGCATGAA 660
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      CAATCATATCTTTTCACCACTCATGATGGCATGCTGCGGGCACTCCTTGAAATGCGTGAA 631
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      GTTACTGATCAAGGCTGGTGCTGATGTGAATGATAGAAGTTCTACTGGACCAAGAACGAC 720
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      GCTACTTGTTGAGGCTGGCGCTGATGTGAACGGGGCTGGAGCTGACC------------- 678
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CCCTTTAGTGCTTGCAGTTGATGATGGATCAGCCGATATTGTCAAAATCTTGCTAGAGGC 780
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      ------------------------------------------------------------
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      TGGAGCTGACCCTAACATTCGTAACGAGTGGGAGGATTCCTATCATGATGGCAGCAGCTC 840
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      ---------CTAACATTCCTGACGAGGAAGGGAGGATTCCTATCATGGTGGCAGCAGCTC 729
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      GTGGTCAACGAGAGCTTGTTGAAATTCTGTTTCCTAGGACAAAACCAATTCCATGT-CTG 899
consensus_11969#2      -----------------------------------------------ATTCCATGTTCTC 13
consensus_11969#1      GTGGTCAACGAGAGCTTGTTGAAATTCTATTTCCTCGGACAAAACCTATTCCATGT-CTG 788
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      CCAGATTGGAGTGTT---GATGGGATAATT--AGAACTAT--GAGATTCACACGTACCGA 952
consensus_11969#2      CCAGATTTGGATTTTTTNAATGGGATTANTTTAGAACTTTTGAGAATCCACACGTACCGA 73
consensus_11969#1      CCAGATTGGAATGTT---GACGGGATAATT--AGAACTAT--GAGAACCACACGTATTGA 841
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      -------------------------------------------------TTTTTTTTTGG 11
                                                                                   

consensus_11969#0      ACCTGAGG--ATGC-AGTTCC-TGTGGAAATACTAGTATCTGATT-CGAAGTTAAATGCC 1007
consensus_11969#2      ACCTGGAGGAATGCCAGTTCCCTGTGNAAANACTAGTATCTGATTTCGAANTTAAATGCC 133
consensus_11969#1      ACCTCAGT--CTGCTA-TTCC-TGTGGAAGAACAAGTGTCTGATG-CAAAGTCGAAAGGA 896
consensus_11969#3      ------------------------------------------------------------
consensus_11969#4      AGGCGAGCATCTCCCATTGATTCGGCAAGGTGCGATCGTGTGGTG----TACTGGTTTGC 67
                                                                                   

consensus_11969#0      -AAGGAAGCATTTGCAGAGGGTGAATACATTACAGCAATCTACTTCTA-CACCAAGGCAC 1065
consensus_11969#2      CAAGGAAGCTTTGNCAGAGGTTGATTACATTACANCATTCTACTTCTAACACCAGGNCAC 193
consensus_11969#1      -AAGGAAGCATTTGCAAAGGGTGACTACCTTACAGCCATCTACTTCTA-CACCCTGGCAA 954
consensus_11969#3      ------TTTTTTTTTTTTTGGGGGGGATGACGAATTCGGGTATTGATTTCGTACGGTTTG 54
consensus_11969#4      AATGCACGATTCCGGATGTGGGGGGAAATCTGGGGT-GGTTGCAGCTGCGATGTTCTCTG 126
                                 *        *  *   *             *     *             

consensus_11969#0      TGGAAAAAGCCCCACTTGATGCC-ACCTTGTTCGCCAACCGCAGCCTCTGCTGGCTGCGG 1124
consensus_11969#2      TGGAAAAAGCCCCACTTGATGCCCACNTTGTTCGCCAACCGCAGCNTCTGCTGGCTNCGG 253
consensus_11969#1      TGGATAAATCCCCACTTGATGCC-ACCTTGTTTGCCAACCGGAGCCTTTGCTGGCTGCGG 1013
consensus_11969#3      CTGGCTAGTTTAGATGGAAATCC--TCCAATTCGAGGATAGATGGATTGGATTTACTCGA 112
consensus_11969#4      CGCGGTAGCTCATAGCAAAAATC--T---GGGTGGCGATTGACGAATCGGGTG---TTGA 178
                             *      *    *   *          *   *  *  *  *  * *      * 

consensus_11969#0      CTGCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTGCGCCCTGGT 1184
consensus_11969#2      CTNCGAGAAGGAGACGTCGCTCTATTGGATGCGCGACGCTGCAAAGCCCTGCGCCCTGGT 313
consensus_11969#1      CAGCGAGAAGGGGACAGAGCTTTACTGGATGCACAGCAGTGCAGGATGCTGCGCCCTGGT 1073
consensus_11969#3      TTTC-TACGG-----TTTGGACTCCCATTTGTGCGGAT-TGCTGAATTAGCTACAGTATA 165
consensus_11969#4      TTTCGTTCTG-----TTTGATCGCTGGTTTAGGTGGAAATACCTAATTGGGGGCTATGTG 233
                          *     *        *          *         * *           *  *   

consensus_11969#0      TGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAG-AGA 1243
consensus_11969#2      TGGTCCAAGGCATGGTACCGTGAGGGCGCGGCCCTCAGTCTCCTGAAGAACTACAGTAGA 373
consensus_11969#1      TGGTCCAAGGCATGGTACCGTGAGGGCGCAGCTCTCAGTTTCATGAAGGACTACAA-AGG 1132
consensus_11969#3      TTTTCCCCCCTTT------TTTTAATC-TGTTTGATTCACTTACGTGGCTGTGTTGTTCG 218
consensus_11969#4      TATTGCATAGTTTGGAGATTTCTGAAT-TAGCCTTTTGTTTCCCCCAAATTTTCTGTTTG 292
                       *  * *      *       *                   *          *        

consensus_11969#0      AGCGGCGGCGGCTTTC-ACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGA 1302
consensus_11969#2      AGCGGCGGCGGCTTTCCACGGAAGCGCTGAAACTTGACCCTGAGAACTACGAGATCAAGA 433
consensus_11969#1      AGCAGTGGACGCATTC-GGGGAGGCACTGAAACTTGACCCCATGAGCGACGAGGTCAAGA 1191
consensus_11969#3      GATT-TTGCTGCTGCTGGTGGA---ATCGATCCTTTGTAGAGATGGCGAAGAAGTTGGAT 274
consensus_11969#4      -ATT-CACTCGCAATCTATCTATCTATCTATCCTGGGTAGAAATGGCCAAGAAGTTGGAC 350
                                 **         *       *  **            * * **  *     

consensus_11969#0      TCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGA 1362
consensus_11969#2      TCGCGTTAAGAGAGGCGTTGGAGTGTCGGAAGAGAGCTGCACGCTCTGAAGAAGATAAGA 493
consensus_11969#1      ACGCGTTAAGGGAGGCGATCGAGTGTCTGAAGAGAGCTGCTTGATCTGAAGATCCGAATA 1251
consensus_11969#3      TTGCGAGGAGTCAAGGACAAGAATGGCCTAAGCGCGCTTCAC-TTCGCTGCAAGCCATGG 333
consensus_11969#4      CTGCGGGGATTCAAGGACATGAATGGGCGAAATGCGCTTCAC-TTGGCTGCAAGCTATGG 409
                         ***   *   * *     ** **    **  * *** *    *      *    *   

consensus_11969#0      ACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGA 1422
consensus_11969#2      ACCCTTGAGCTGCTGCTGCTGCTGCATCAGTGCATCACCCTTTTGACCTCACCTTTCAGA 553
consensus_11969#1      ACCCTTGAGCAGCTACTGC--------------ATCGTCCTTTTGGCCTCACCTCAC--- 1294
consensus_11969#3      GCACCTGGATTGCTGCAAGTTCCTTGTGGAGGAATCGGGCCTT-GATGTCAACT--CGGT 390
consensus_11969#4      GCATCTGGAGATCTGCAAGTTCCTGGTGGAGGAATCGGGCCTT-GATGTCAACT--CAGG 466
                        *   **     ** *                 ***   * ** *   *** **  *   

consensus_11969#0      CTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTG-TTTCCCA 1481
consensus_11969#2      CTGCCACATCTCTGATCTCACATTCTCTCTACGTGTAACTACCAACGGCCTG-TTTCCCA 612
consensus_11969#1      CTGTCAGACTGCT----TCACAT-CTTTCCAC-TGTAACTACCAACGACTAGGTTTTGCA 1348
consensus_11969#3      TGGTCACAAAGGTGAA---ACGCCAGTGTTCTATGCCGCGATCGATGGGAAC--ATTCAG 445
consensus_11969#4      CTCTCACAGAGGTGCGTGCACATCAATGATTTCTCG------------------------ 502
                           ** *    *      **            *                          

consensus_11969#0      AACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTT-TGGTCGAAAAAAAAA 1540
consensus_11969#2      AACTATCTAAACTGTTTAGCTGATCACCATGCATCTGTGTCCTT-TGGTCGAAAAAAAAA 671
consensus_11969#1      AACCATGCTGACTGTTTAGCT-ATCTCTGC-TGTCAGAGTACGTATGGCAGGAACATGCA 1406
consensus_11969#3      GTTTTGGGGTACCTTCTTGATCATGGTGGTGACCCGGTGAAACCCGAGGAGAGGGGCTGC 505
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      ACGTAGT--AACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGT 1598
consensus_11969#2      ACGTAGT--AACTAGGAGTAGTTCGCTGGGAAGGGACATCCCTTGAGAGATCAAAATAGT 729
consensus_11969#1      CTGTCTTTCGGTCAGAAACCATATGGTTTGCTAGGTCATCATCACCCATACATATGCAGT 1466
consensus_11969#3      ACGCCGCTGCACAATGCGGCAGAGAATGGTCTGCTTACTGTGCTCTTCGGTTCACTTGCC 565
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      TTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAGCTGCACTTG 1658
consensus_11969#2      TTCCTGTTAGTTTCCTGTAGTTTGATAGATTATTGTCGATACATATTGCAAAAAAAAAAA 789
consensus_11969#1      TGCACTT---TCTTCCATTTTGTGCGCAACTCATGCAAGTGCAAACTGGCAGTAATAGTA 1523
consensus_11969#3      GGATCTGGATTTTAAGGATGGCTTATATGGCATTTCTTGCATACCAATGACATGATATCT 625
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      TCTTCCCTTTGTGTGCGACTCTAATGCAAGCGCAGACTGGCAGCATGATATTTGTATATG 1718
consensus_11969#2      ------------------------------------------------------------
consensus_11969#1      TATGATATGTAAAGTTCGTCAGT------------------------------------- 1546
consensus_11969#3      GTCTGTGGATTATCTTGGTTGAACCTTTGTGCTAATTTT--------------------- 664
consensus_11969#4      ------------------------------------------------------------
                                                                                   

consensus_11969#0      ATATATGTGAAGTCCGGCAGT 1739
consensus_11969#2      ---------------------
consensus_11969#1      ---------------------
consensus_11969#3      ---------------------
consensus_11969#4      ---------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)