cluster # 11973

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Oryza sativa
cluster # 11973 cluster # 11973 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11973#0 length = 1929 sequences # 9
consensusID : consensus_11973#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1929
fasta sequence
                              [TCTCCCTTTCGCCGCCGCCGCCGCNGTTTCCCACCATGCGCCGCTTCGTCGCCGACCGGGCGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCGCGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGGCCGCGGCGGCGGCGCTGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGGTGTCACTCGACACCATCAACCCCAAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGGTATAAAGGGTTTGCGTGATGAAATTGCTGCTGGAATTGCTGCCC-GTGATGGTTTTCAT-GCTAG--TGGAGATAA-CATATTCCTAACAGATGGAGCGAGCCCAGCAGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTGTTATAAATCCAGGGAACCCAACTGGGC-AGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGTCGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGTACCAAGAAAACATATATGTAGAAGACAAGAAATTCCATTCTTTCAAAAAGATCGCACGATCAAT-GGGATACACAGATGATGATCTTCCTTTAGTATCATTCCAATCAGTTTCGAAAGGTTACTACGGAGAATGTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAATTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTCGCTAGCCTCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTC-TTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAAGAATCTCGTAAACTGAAAAATTGCTGGCATTGGATGTACTTCTAAAACTTGGCTTTTCTGCCTTCTGTCAAAGGCAATGCCATCAACTTCAAATCAAAATAATAAGACCATCCATTCGCACCACCCTGGATTGGTCAGTGTAACTCCTCCTCAGCTCTTGTTAGGTCGAATGAAAACCTGCAAAATCCTGGAGAATTGCTTACTTGCAAAAAGAAGTTAAAAACCTTTGATTCTGTTTGCCAAAAAAAAAAGA]

[+] EMBL CB656405             [TCTCCCTTTCGCCGCCGCCGCCGCNGTTTCCCACCATGCGCCGCTTCGTCGCCGACCGGGCGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCGCGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGGCCGCGGCGGCGGCGCTGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGGTGTCACTCGACACCATCAACCCCAAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGGTATAAAGGGTTTGCGTGATGAAATTGCTGCTGGAATTGCTGCCC GTGATGGTTTTCAT GCTAG  TGGAGATAA CATATTCCTAACAGATGGAGCGAGCCCAGCAGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB622588             [                   GCCGC GTTTCCCACCATGCGCCGCTTCGTCGCCGACCGGGCGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCGCGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGCCGGCGGCGGCGGCGCTGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGGTGTCACTCCACACCATCAACCCCAAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGAATTTACAACCAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGATACTTTATTGCGACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCACAGAGGTCTTGTCGGTATGTGATCATCCAGCTCTGCTGGATAAAAGTGACACTCATGCTCTGTACGGTTCACATGCTATAGAAAGAGCGTGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATACTCAGGGTATAAAGGGTTTGCGTGATGATATTGCTGCTGGAATTGCTGCCC GTGATGGTTTTCAT GCTAG  TGGAGATAA CAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BM422210             [                                                                                                                   AGGCG GCCGTCTG CGGGG TGGCCCCTCGG GGCATCCCCGC     G CGCGGGGGGGGCGCTGG CATGGCTTCCG CATGGTGAGGG CATGTCGACCGCGG TG CGGCGCGGCGCCGGTGTCACTCGACACCATCAACCCAAGGGTGTTGAAGTGTGAATATGCTGTCCG GGAGAGATTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCC TTTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGG CAGCAGCCAGTTACATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGG AAATTCTAGA AAGATCCCAGGAAGAGCAACAGGAGCCTATAG CATAGTCAGGGTATAAAGGG TTGCGTGATGAAATTGCTGCTGGAATTG TGCCCGGTGATGGTTTNCATGGCTAGATTGGAGATAACCATATTCCTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BE040432             [                                                                                                                                                                                                                                                                CAA CCCGAGGGGTGGAAGTGTGAATATGCTGTCCGTGGAGAGATTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTTTTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTACATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAACTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCCCAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGGTATAAAGGGTTTGCGTGATGAAATTGCTGCTGGAATTGCTGCCC GTGATGGTTTTCAT GCTAG  TGGAGATAA CATATTCCTAACAGATGGAGCAAGCCCAGCAGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGGATCACTGGTAGAGCACTTGTTGGTATAAATCCAGGGAACCCAACTGGGCAAGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGGTG ATTCTTCAAAAATGAAGG CTTGGTCTT TTGGCGATGAGGTGTACCCAG AAACCTATATGTGAAAGACAAGGAATTCCTTCCTTTCAAAAGGATCGCCCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK060481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCAATTATTGATAAGATCTGAGAATGATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTGTTATAAATCCAGGGAACCCAACTGGGC AGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGTCGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGTACCAAGAAAACATATATGTAGAAGACAAGAAATTCCATTCTTTCAAAAAGATCGCACGATCAAT GGGATACACAGATGATGATCTTCCTTTAGTATCATTCCAATCAGTTTCGAAAGGTTACTACGGAGAATGTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAATTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTCGCTAGCCTCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGATAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTC TTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAAGAATCTCGTAAACTGAAAAATTGCTGGCATTGGATGTACTTCTAAAACTTGGCTTTTCTGCCTTCTGTCAAAGGCAATGCCATCAACTTCAAATCAAAATAATAAGACCATCCATTCGCACCACCCTGGATTGGTCAGTGTAACTCCTCCTCAGCTCTTGTTAGGTCGAATGAAAACCTGCAAAATCCTGGAGAATTGCTTACTTGCAAAAAGAA                                      ]
[+] EMBL AU032346             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATGGTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATGAGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTGTTATAAATCCAGGGAACCCAACTGGGC AGGTTCTTGCTGAGGAAAATCAAAAGAAAATTGTCGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGTACCAAGAAAACATATATGTAG AGGCCAGAAATCCCATTCTTTC AAAAGATCGCACGATCAATGGGGAT CNCAGATGATGAnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB622589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCAGTTTCGAAAGGTTACTACGGAGAATGTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAATTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTTGCTAGCCTCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTC TTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAAGAATCTCGTAAACTGAAAAATTGCTGGCATTGGATGTATTTCTAAAACTTGGCTTTTCTGCCTTCTGTCAAAGGCAATGCCATCAACTTCAAATCAAAATAATAAGGCCATCCATTCGCACCACCCTGGATTGGTCAGTGTAACTCCTCCTCAGCTCTTGTTAGGTCGAATGAAAACCTGCAAAATCCTGGAGAATTGCTTACTTGCAAAAAGAAGTTAAAAACCTTTGATTCTGTTTGCCAAAAAAAAAAGA]
[+] EMBL C26957               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGTGGCATCAGTAAACCTNTNTTCCAACGTGTCTGGCCAAATACTCGCTAGCCTCATAATGAACCCACCGAAGCTTGGGGATGANTCCTATGANTCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTNTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGNCCCAGAAGGCAATTGGAGCTGCCCAAGCAGNTGGTACTGCCCCANATGCGTATTATGNCCGCCGGCTTCTTTGAAGCTACTGGAATT TT TTGTTtg                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF340711             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCTAGCCTCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAGACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCTTAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATTTGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATGCCCGCCGCCTTC TTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGGTTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGATCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAAGAATCTCGTAAACTGAAAAATTGCTGGCATTGGATGTACTTCTAAAACTTGGCTTTTCTGCCTTCTGTCAAAGGCAATGCCATCAACTTCAAATCAAAATAATAAGACCATCCATTCGCACCACCCTGGATTGGTCAGTGTAACTCCTCCTCAGCTCTTGTTAGGTCGAATGAAAACCT                                                                          ]




>consensus_11973#0
TCTCCCTTTCGCCGCCGCCGCCGCNGTTTCCCACCATGCGCCGCTTCGTCGCCGACCGGG
CGCGGCGCGCGGTGACCTCCTCCGCCGCTTCGATGCGCGCGGCCGCCACCAGATCAGCCG
CGCCGTCTGCCGGGGCTGCCCCCTCGGCGCCATCCCCGCCGCCGGCCGCGGCGGCGGCGC
TGGCCATGGCTTCCGCCATGGTGAGGGCCATGTCGACCGCGGCTGCCGGCGCGGCGCCGG
TGTCACTCGACACCATCAACCCCAAGGTGTTGAAGTGTGAATATGCTGTCCGTGGAGAGA
TTGTTACACATGCTCAGAATTTACAACAAGAATTACAGAAAAACCCAGACTCACTTCCTT
TTGACGAGATACTTTATTGCAACATTGGAAATCCCCAATCTCTTGGCCAGCAGCCAGTTA
CATTTTTCAGAGAGGTCTTGTCGTTATGTGATCATCCAGCTCTGCTGGATAAAAGTGAAA
CTCATGCTCTGTACAGTTCAGATGCTATAGAAAGAGCATGGCAAATTCTAGACAAGATCC
CAGGAAGAGCAACAGGAGCCTATAGCCATAGTCAGGGTATAAAGGGTTTGCGTGATGAAA
TTGCTGCTGGAATTGCTGCCCGTGATGGTTTTCATGCTAGTGGAGATAACATATTCCTAA
CAGATGGAGCGAGCCCAGCAGTGCACATGATGATGCAATTATTGATAAGATCTGAGAATG
ATGGCATTCTCTGCCCTATTCCGCAATACCCGCTCTACTCCGCGTCAATTGCTCTCCATG
GTGGTTCTCTTGTTCCTTATTTCCTTGATGAAGAGACAGGTTGGGGACTGGAGGTTGATG
AGCTTAAGAAACAATTGGAGGAGGCTCAGTCTAAGGGTATCACTGTTAGAGCACTTGTTG
TTATAAATCCAGGGAACCCAACTGGGCAGGTTCTTGCTGAGGAAAATCAAAAGAAAATTG
TCGAATTCTGCAAAAATGAAGGACTTGTTCTTCTTGCAGATGAGGTGTACCAAGAAAACA
TATATGTAGAAGACAAGAAATTCCATTCTTTCAAAAAGATCGCACGATCAATGGGATACA
CAGATGATGATCTTCCTTTAGTATCATTCCAATCAGTTTCGAAAGGTTACTACGGAGAAT
GTGGAAAACGAGGAGGCTATATGGAAGTAACTGGATTTAGCGCTGATGTAAGGGAACAAA
TTTACAAGGTGGCATCAGTAAACCTGTGTTCCAACGTGTCTGGCCAAATACTCGCTAGCC
TCATAATGAACCCACCGAAGGCTGGGGATGAATCCTATGAATCCTTCATGGTAGAGAAAG
ACGGGATCCTCTCCTCTCTGGCTCGACGTGCAAAGGCTTTGGAAGAAGCCTTCAACAGCT
TAGAAGGCATAACATGCAACAAGGCCGAGGGTGCGATGTATCTCTTCCCTCGCATCTATT
TGCCCCAGAAGGCAATTGGAGCTGCCCAAGCAGCTGGTACTGCCCCAGATGCGTATTATG
CCCGCCGCCTTCTTGAAGCTACTGGAATTGTTGTTGTTCCTGGTTCTGGATTTGGGCAGG
TTCCTGGAACGTGGCATTTTAGATGCACAATTTTGCCACAGGAGGACAAAATACCAGCGA
TCATATCCAAGTTCAAGGAGTTCCACGAGAAGTTCATGGATGAATTCCGGGATTAAGAAT
CTCGTAAACTGAAAAATTGCTGGCATTGGATGTACTTCTAAAACTTGGCTTTTCTGCCTT
CTGTCAAAGGCAATGCCATCAACTTCAAATCAAAATAATAAGACCATCCATTCGCACCAC
CCTGGATTGGTCAGTGTAACTCCTCCTCAGCTCTTGTTAGGTCGAATGAAAACCTGCAAA
ATCCTGGAGAATTGCTTACTTGCAAAAAGAAGTTAAAAACCTTTGATTCTGTTTGCCAAA
AAAAAAAGA
clustalw multiple alignements is not computed in this case