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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11975#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1337 fasta sequence
[TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTCGCCGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAA--ATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA-GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTCCCAAAAAAAAAAAAAAAAAAGGA]
[+] EMBL AK065701 [TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTCGCCGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAA ATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATT ]
[+] EMBL CB656042 [ GCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTAC ]
[+] EMBL AK067898 [ TATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCA ]
[-] EMBL CB654713 [ AATTCAGTGATGTCTTTGTGGATGAGCCACCATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGCCCTAGAGA GGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTTTTTGGCACAAGGAACAAAATATGGTTAGCCACCCATGATATATCAGAGGTATAATGCTTACCCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTTTAGAAGTAATGTTAATGCATTTTTTCAAGTGTTGTACTGCGAATAATTCGATGGGTTTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAATTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATTTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCATTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTCCCAAAAAAAAAAAAAAAAAAGGA]
[+] EMBL CB679712 [ AGAGACGTATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATT ]
consensusID : consensus_11975#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1284 fasta sequence
[CGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAAATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAAAAAAAAAGA]
[+] EMBL CB654712 [CGCCGCCCTTGCGCCGCCTCCGCGGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGGATTGGATGGCATCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAAATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACC ]
[-] EMBL CB656043 [ AACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCCATCGTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAAAACATCTTGCTGCCTATGCAGATGAATTTTTGGTTCATGGTGTTGATGTGGAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCACAGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAAAAAAAAAGA]
consensusID : consensus_11975#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence
[TTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTCTTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCCTGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATGTGCCAAGCATGCCAATGTGGCCATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATTGAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGATTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT]
[-] EMBL CB631942 [TTAGGAATTGATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGATAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCGGAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCAGAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTCTTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCCTGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATGTGCCAAGCATGCCAATGTGGCCATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATTGAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGATTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT]
consensusID : consensus_11975#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence
[GCCCTTGACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGTTCACGCTCTTCTAGTGTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCATGGCGTGCATGGCATTTCATAGGCAAAAAGTGTTAGAACAGTGGCATGGTTGATTACATCTTTTTGGAATTTCGCTTAGAACAGTTCATGAGGGTCCCTTTCTTGAATTTTTCAATTTGATCTGT]
[+] EMBL CB631941 [GCCCTTGACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGCGAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGCGGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGTGGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAAGGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCATCAAACGATGGCACGGCACTTGTTACAAATTTTGAATCAGACAAACCTCCAGCAGAATTTGCAAATATATATAAAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAGCTGCTGCCATGGAAGCACTACATGCATATCCTGTATGTGTTTAGTGAAGGCAAAATGAACATTGAACGGCTGAAGCAACTTGTCGATCTGGTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGTTCACGCTCTTCTAGTGTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCATGGCGTGCATGGCATTTCATAGGCAAAAAGTGTTAGAACAGTGGCATGGTTGATTACATCTTTTTGGAATTTCGCTTAGAACAGTTCATGAGGGTCCCTTTCTTGAATTTTTCAATTTGATCTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11975#1 ------------------------------------------------------------
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 TCTTTACCTAGTTCGGCTTGGGCCTCGCACCGACTCCGACTCCGACCCCGACTCCGACTC 60
consensus_11975#2 ---------------------------------------------------TTAGGAATT 9
consensus_11975#1 --CGCCGCCCTTGCGCCGCCTCCGC---GGAGCCCTCCCCTCCCCGCCGGCGGCGGCTGC 55
consensus_11975#3 -----------------GCCCTTG----ACTCTCCTCCCCTCCCCGCCGGCGGCGGCTGC 39
consensus_11975#0 GCCGCCGCCCTTGCGCCGCCTCCGC---GGAGCCCTCCCCTCCCCGCCGGCGGCGTCTGC 117
consensus_11975#2 GATGAAGAACTTGTCGAACTATTGGGACGTTATTCACCTATACCTGTAACTTATGCTGGG 69
* * * ** * ** * * *
consensus_11975#1 GAAGCGACTGGATTGGATGGCATCGAG------------GGTTCCGTCTCCACCGTGCGC 103
consensus_11975#3 GAAGCGACTGCATTGGATGGCGTCGAGATGCGCGGCGAGGGTTCCGTCTCCACCGTGCGC 99
consensus_11975#0 GAAGCGACTGGATTGGATGGCATCGAG------------GGTTCCGTCTCCACCGTGCGC 165
consensus_11975#2 GGTGTGTCTACAATGGATGACCTAGAGAGG------ATAAAAAGAGCAGGCAACAGTCGA 123
* * * ** * ****** * * *** * ** * **
consensus_11975#1 GGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGT 163
consensus_11975#3 GGCGGCGCGGTCTGGCTGGGCTGGCCCGGTGGTCTCCATCCGGCCGGCGAGATCCGGCGT 159
consensus_11975#0 GGCGGCGCGGTCCGGTTGGGCTGTCCCGATGGTCTCCGTCCGGCCGGCGAGATCCGGCGT 225
consensus_11975#2 GTTGATGT--TACGGTTGGGAGTGCCCT-TGATAT--ATTCGG---AGGAGATTTGCCCT 175
* * * * ** **** *** ** * * * *** ***** * * *
consensus_11975#1 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAA 223
consensus_11975#3 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTAGCTTCAGGCCGTGTATCGATATTCATAA 219
consensus_11975#0 GGCGAGAGGACGTGCTGTGGTGTGCGCCGTTATCTTCAGGCCGTGTATCGATATTCATAA 285
consensus_11975#2 ACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCCAACCATGATATATCA 235
** * *** ** *** * * * * * * * ** ** *
consensus_11975#1 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 280
consensus_11975#3 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 276
consensus_11975#0 GGGGAAAGTTAAACAGATTGTTGGCTCTACTCTTCGGGATTCA---TCAAACGATGGCAC 342
consensus_11975#2 GAGTGTTGTACTGCGAATAATTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGT 295
* * ** * ** ** * * * * * * * **** * *
consensus_11975#1 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATATA 339
consensus_11975#3 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATATA 335
consensus_11975#0 GGCACTTGTTACAAATTTTGAATCAGACAA-ACCTCCAGCAGAATTTGCAAATATATA-- 399
consensus_11975#2 TCGATTTTGTTCGGATCTGGAACTAGGCTTTACATTGAGGACTGGCCG-AGCTGTTTATC 354
* ** * * ** * *** ** * ** * ** * * * * * **
consensus_11975#1 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 399
consensus_11975#3 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 395
consensus_11975#0 AAGAGGATGAACTTATTGGTGGACATGTAATCATGCTTGGTGCAGATCCTGCTAGTCAAG 459
consensus_11975#2 AAGCGACTGCACTATATGTTTTTGAGATTAAAACACTGTTAACATGATATGTAAGCACAT 414
*** * ** *** ** * * * * * ** ** ** ** *
consensus_11975#1 CTGCTGCCATGGAAGCACTACATGCATATCCTGGTGGTTTGCAAGTTGGAGGTGGAATAA 459
consensus_11975#3 CTGCTGCCATGGAAGCACTACATGCATATCCTG--------------------------- 428
consensus_11975#0 CTGCTGCCATGGAAGCACTACATGCATATCCTG--------------------------- 492
consensus_11975#2 CTACTGAGTTAGCCCGTCTGATGGTGAAACATAATGG----------------------- 451
** *** * * ** * * * *
consensus_11975#1 ATTTGGAGAATGCGATATCTTACCTTAATGAAGGTGCCAGTCACGTGATTGTTACTTCTT 519
consensus_11975#3 -----------------------------------------------------------T 429
consensus_11975#0 -----------------------------------------------------------T 493
consensus_11975#2 ------------------------------------------GGGCCTCCACTAGTCCAC 469
consensus_11975#1 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 575
consensus_11975#3 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 485
consensus_11975#0 ATGTGTTTAGTGA-AGGCAAAAT---GAACATTGAACGGCTGAAGCAACTTGTCGATCTG 549
consensus_11975#2 AGCTCATTAATCATACTCAACATTTGGCGTACCAAGCTGCAGTGGTTACAGTGCGTTTTC 529
* * *** * * * *** ** * * * * ** * * ** ** * *
consensus_11975#1 GTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCC 635
consensus_11975#3 GTTGGGAAACATACGCTTGTTTTGGACCTTAGTTGTAGAAAAAAG--TTCACGCTCTTCT 543
consensus_11975#0 GTTGGGAAACATAGGCTTGTTTTGGACCTTAGTTGTAGAAAAAAGGATGGAAGATATGCC 609
consensus_11975#2 TTTGGAAGTGGGCCGAGGGATTTATGCCCCACTTAAAATGTGGGCATTTCCCCACTTTCC 589
**** * * * *** ** * ** * * * *
consensus_11975#1 ATC--GTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAA 693
consensus_11975#3 AGT--GTGATGCCTATGCTGCATGTCGGCATACGGACAATTCCAAACGCAT-GGCGT--- 597
consensus_11975#0 ATC--GTGACTGACAGATGGCAGAAATTCAGTGATGTCTTTGTGGATGAGCCAACATTAA 667
consensus_11975#2 TGCAGGTCATGTGAAATCACTACTGCAGTACTCCTATG-TGCCAAGCATGCCAATGTGGC 648
** * * * * * *
consensus_11975#1 AACATCTTGC-----TGCCTATGCAGAT--GAATTTTTGGTTCATGGT--GTTGATGTG- 743
consensus_11975#3 -GCATGGCAT-----TTCATAGGCAAA---AAGTGTTAGAACAGTGGC--ATGGTTG--- 643
consensus_11975#0 AACATCTTGC-----TGCCTATGCAGAT--GAATTTTTGGTTCATGGT--GTTGATGTG- 717
consensus_11975#2 CATGTGGCCTGTGGGTCTATTGGCGACGTTTGGCTGTGGAGTACTGCTCAGTAATGGATT 708
* * * ** * * ** * *
consensus_11975#1 GAGGGGAAAAGGGTAGGAATTGATGAAGAACTTGTCG--AACTATTGG-----GACGTTA 796
consensus_11975#3 -ATTACATCTTTTTGGAATTTCGCTTAGAAC--------AGTTCATGA-----GGGTCCC 689
consensus_11975#0 GAGGGGAAAAGGTTAGGAATTGATGAAGAACTTGTCG--AACTATTGG-----GACGTTA 770
consensus_11975#2 GAGTAAAACATCTCAAGGCACCATTTGCAACTTCTCAGCAGTTCATAATGCAAGAGCTGA 768
* * *** * * * *
consensus_11975#1 TTC-ACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGA 855
consensus_11975#3 TTT-CTTGAATTTTTCAATTTGATCTGT-------------------------------- 716
consensus_11975#0 TTC-ACCTATACCTGTAACTTATGCTGGGGGTGTGTCTACAATGGATGACCTAGAGAGGA 829
consensus_11975#2 TTTGTTTGGAACTATGGATGCAAATTGTTGGTCTTGT----------------------- 805
** * **
consensus_11975#1 TAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCG 915
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 TAAAAAGAGCAGGCAACAGTCGAGTTGATGTTACGGTTGGGAGTGCCCTTGATATATTCG 889
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 GAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCC 975
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 GAGGAGATTTGCCCTACAAGGACGTCGTTCTTTGGCACAAGGAACAAAATATGGTTAGCC 949
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 AACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCAC 1035
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 AACCATGATATATCAGAGGTATAATGCTTAACCTGTTCCATCAGCTCGATTGTTATGCAC 1009
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 AGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAA 1095
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 AGACCTCCAGGGTCTAGAAGTAATGCTAATGCATTTTCTCAAGTGTTGTACTGCGAATAA 1069
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 TTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGG 1155
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 TTCGATGGGTCTTCTGTGGTATAAGTTCAAGCTGAAGGGTTCGATTTTGTTCGGATCTGG 1129
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 AACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTT 1215
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 AACTAGGCTTTACATTGAGGACTGGCCGAGCTGTTTATCAAGCGACTGCACTATATGTTT 1189
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 TTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAAAAAAAAAAA 1275
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 TTGAGATTAAAACACTGTTAACATGATATGTAAGCACATCTACTGAGTTAGCCCGTCTGA 1249
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 AAAAAAAGA--------------------------------------------------- 1284
consensus_11975#3 ------------------------------------------------------------
consensus_11975#0 TGGTGAAACATAATGGGGGCCTCCACTAGTCCACAGCTCATTAATCATACTCAACATTTG 1309
consensus_11975#2 ------------------------------------------------------------
consensus_11975#1 ----------------------------
consensus_11975#3 ----------------------------
consensus_11975#0 GCGTCCCAAAAAAAAAAAAAAAAAAGGA 1337
consensus_11975#2 ----------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||