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Oryza sativa
cluster # 11979 cluster # 11979       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11979#0 length = 1439 sequences # 2  
consensus_11979#1 length = 1362 sequences # 7  

consensusID : consensus_11979#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1439
fasta sequence
                              [CCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTGCACCAATTATTACATGTGGAGTGTGGACTCTGTCTCTCTCTATCTCTCTCGTTTTGGTAGTTTTCTTGCACTTTCAAGATTCAACTGAGCAGTTGTGTTATGTATCATTAAATGAGCTTGTATTTTCTTAGCTCGGGTGTGACATGAACATATAAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATGGATACTCTTGGGAGTATGTGTTGCAAAAAAAAATAAAAA]

[+] EMBL CB644946             [CCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTGCACCAATTATTACATGTGGAGTGTGGACTCTGTCTCTCTCTATCTCTCTCGTTTTGGTAGTTTTCTTGCACTTTCAAGATTCAACTGAGCAGTTGTGTTATGTATCATTAAATGAGCTTGTATTTTCTTAGCTCGGGTGTGACATGAACATATAAGGTTTCGATGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB644947             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATTAAATGAGCTTGTATTTTCTTAGCTCGGGTGTGACATGAACATATAAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATGGATACTCTTGGGAGTATGTGTTGCAAAAAAAAATAAAAA]


>consensus_11979#0 CCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCA GCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCC CGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCG CCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGG AAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCG TCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAG ATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGC CAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAAT CCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTC TCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTG CTTTCTACCGTGATGTTTCAGGTGCACCAATTATTACATGTGGAGTGTGGACTCTGTCTC TCTCTATCTCTCTCGTTTTGGTAGTTTTCTTGCACTTTCAAGATTCAACTGAGCAGTTGT GTTATGTATCATTAAATGAGCTTGTATTTTCTTAGCTCGGGTGTGACATGAACATATAAG GTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTA AGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATAC TTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATC TTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTC CAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAAT TCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTG CTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGA CAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTAC AGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGT AACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAG CTTTGCCTCTTGCCTAAATGGATACTCTTGGGAGTATGTGTTGCAAAAAAAAATAAAAA



consensusID : consensus_11979#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1362
fasta sequence
                              [GGCCCGCCCATCGCAGCCCAAATCCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATTCATACTCTTGGGAGTATGTGTTGCAAAATATCTTTGTTGTGTGAAATGTGTACATGGTCTCTGCAATCCCAAGTTGATGACATTTGAATCAAAAAAAA]

[+] EMBL CB667535             [GGCCCGCCCATCGCAGCCCAAATCCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB652283             [                  CAAATCCCTTGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGACCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGATTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATAATATTGAGCTTAAGAAcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AY224470             [                                                                                                                                                                   CGGCTGCTGTGTTGGACGGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTGCCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGATCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCATTACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGA                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK062624             [                                                                                                                                                                                                                                                                                                                                                                                                                  CTTCTATGCTTCCTGGTGCCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTATTCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGATTCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAAT                                                                                                                                                                 ]
[-] EMBL CB667536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GATTCATGTTTTTCCAACACTATTTCTCTTG ATTCAACTATGCGAGTGCGGTATCATGGACCACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATTCATACTCTTGGGAGTATGTGTTGCAAAATATCTTTGTTGTGTGAAATGTGTACATGGTCTCTGCAATCCCAAGTTGATGAC                 ]
[-] EMBL CA763645             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAAATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATTCATACTCTTGGGAGTATGTGTTGCAAGATATCTTTGTTGTGTGAAATGTGTACATGGTCTCTGCAATCCCAAGTTGATGACATTTGAATCAAAAAAAA]
[-] EMBL C28238               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGNATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATT                                                                                                  ]


>consensus_11979#1 GGCCCGCCCATCGCAGCCCAAATCCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGA CCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGA TTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGAC GGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTG CCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGA TCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCAT TACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTG CCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTAT TCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGAT TCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACC ACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTTTCGATGTTTCAAT GACGTCAGAGGCCGTGCTACATTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACA GGAAAATTGTCCATTCTGGTGGGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTA TCTAGCACTGGCAACTGCATTTGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGAT AGGTTCCTTCGCCAAACGGGCGTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGT GCATGAATATTTCTTCACCTACCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCC TTCGAAGCGAGGGAATTTACAGGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTC ATTAGCATCCGTCTCAATCGGAGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGA GCTAAGATAAAGTGCAACTTTTTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGAT ATGAACACTAAGAATCTGTTGTAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAA TCACTTTTACCATTTCCCATTGTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTA AATTCATACTCTTGGGAGTATGTGTTGCAAAATATCTTTGTTGTGTGAAATGTGTACATG GTCTCTGCAATCCCAAGTTGATGACATTTGAATCAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11979#0      -----------------------CCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGA 37
consensus_11979#1      GGCCCGCCCATCGCAGCCCAAATCCCATGGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGA 60
                                              *************************************

consensus_11979#0      CCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGA 97
consensus_11979#1      CCTCCCGGCGCTGAAGGCATCCAGCGGCCGCGCTCCAGGCCCCCCCCCCCAGATCTAGGA 120
                       ************************************************************

consensus_11979#0      TTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGAC 157
consensus_11979#1      TTGAGCGATCCCCTCCTTTTCCCCGCGGTCCCCCATGGCGACGCGGCTGCTGTGTTGGAC 180
                       ************************************************************

consensus_11979#0      GGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTG 217
consensus_11979#1      GGCGCTCCTCCTCCCCATCATCGCCGCCACCGCCGCCGCCTCGCCGCTTCCCGAGGCGTG 240
                       ************************************************************

consensus_11979#0      CCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGA 277
consensus_11979#1      CCCGGTGCCTACTGCGGCGGAGGAAATCCTTGGGCCTGGCGGCACATGCACGACGCTGGA 300
                       ************************************************************

consensus_11979#0      TCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCAT 337
consensus_11979#1      TCGCCGCGGCGACCCTGTCGGCGTCATCGAGGGGGATGAGGTAACATTGGCGAAGGCCAT 360
                       ************************************************************

consensus_11979#0      TACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTG 397
consensus_11979#1      TACTCTTCTTCACATGAACAAAGATGATTACATTGCTGTACTCTTCTATGCTTCCTGGTG 420
                       ************************************************************

consensus_11979#0      CCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTAT 457
consensus_11979#1      CCCATTCTCACAAGAATGCAAGCCAAATTTTGAGATATTAGCATCTTTGTTCCCATCTAT 480
                       ************************************************************

consensus_11979#0      TCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGAT 517
consensus_11979#1      TCGGCATTTTGCGTTTGAAGAATCCTCAATCAGGCCAAGTATAATATCAAGATATGGGAT 540
                       ************************************************************

consensus_11979#0      TCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACC 577
consensus_11979#1      TCATGGTTTTCCAACACTATTTCTCTTGAATTCAACTATGCGAGTGCGGTATCATGGACC 600
                       ************************************************************

consensus_11979#0      ACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGTGCACCAATTATTAC 637
consensus_11979#1      ACGGACTGTTAAGTCCCTGGCTGCTTTCTACCGTGATGTTTCAGGT-------------- 646
                       **********************************************              

consensus_11979#0      ATGTGGAGTGTGGACTCTGTCTCTCTCTATCTCTCTCGTTTTGGTAGTTTTCTTGCACTT 697
consensus_11979#1      ------------------------------------------------------------
                                                                                   

consensus_11979#0      TCAAGATTCAACTGAGCAGTTGTGTTATGTATCATTAAATGAGCTTGTATTTTCTTAGCT 757
consensus_11979#1      ------------------------------------------------------------
                                                                                   

consensus_11979#0      CGGGTGTGACATGAACATATAAGGTTTCGATGTTTCAATGACGTCAGAGGCCGTGCTACA 817
consensus_11979#1      -------------------------TTCGATGTTTCAATGACGTCAGAGGCCGTGCTACA 681
                                                ***********************************

consensus_11979#0      TTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTG 877
consensus_11979#1      TTCAGTAGATGGTATTGAGCTTAAGAAGGATGCTGAACAGGAAAATTGTCCATTCTGGTG 741
                       ************************************************************

consensus_11979#0      GGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATT 937
consensus_11979#1      GGCACGCTCACCGGAGAAAATACTTCAGCAGGATACTTATCTAGCACTGGCAACTGCATT 801
                       ************************************************************

consensus_11979#0      TGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGC 997
consensus_11979#1      TGTAATCTTGAGGTTACTGTATCTTCTCTTTCCAAAGATAGGTTCCTTCGCCAAACGGGC 861
                       ************************************************************

consensus_11979#0      GTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTA 1057
consensus_11979#1      GTGGAGGAGGCATACTCTTTTTCCAAACTTGGTGGGTGTGCATGAATATTTCTTCACCTA 921
                       ************************************************************

consensus_11979#0      CCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACA 1117
consensus_11979#1      CCTTGAACAAGCAAGACACAAATTCTTTAGGTTATACCCTTCGAAGCGAGGGAATTTACA 981
                       ************************************************************

consensus_11979#0      GGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGG 1177
consensus_11979#1      GGAAGGGGCCAGGAATGCCACTGCTTGGGCTTCCAAGTCATTAGCATCCGTCTCAATCGG 1041
                       ************************************************************

consensus_11979#0      AGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTT 1237
consensus_11979#1      AGAACCAAGCACTATTGGAAGGACAAACTCTACAAATGAGCTAAGATAAAGTGCAACTTT 1101
                       ************************************************************

consensus_11979#0      TTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTG 1297
consensus_11979#1      TTTGTCCGCAGGGATATTTGTACAGTAGAGTATCAGGATATGAACACTAAGAATCTGTTG 1161
                       ************************************************************

consensus_11979#0      TAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATT 1357
consensus_11979#1      TAACCGGCTTTGTTAGATATTGTAACATCCTTAGAATAATCACTTTTACCATTTCCCATT 1221
                       ************************************************************

consensus_11979#0      GTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATGGATACTCTTGGGAGTAT 1417
consensus_11979#1      GTTACTTTCACTTCGGTTTATAGCTTTGCCTCTTGCCTAAATTCATACTCTTGGGAGTAT 1281
                       ******************************************  ****************

consensus_11979#0      GTGTTGCAAAAAAAAATAAAAA-------------------------------------- 1439
consensus_11979#1      GTGTTGCAAAATATCTTTGTTGTGTGAAATGTGTACATGGTCTCTGCAATCCCAAGTTGA 1341
                       *********** *   *                                           

consensus_11979#0      ---------------------
consensus_11979#1      TGACATTTGAATCAAAAAAAA 1362
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)