cluster # 1198

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Oryza sativa
cluster # 1198 cluster # 1198 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1198#0 length = 219 sequences # 2

consensusID : consensus_1198#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 219
fasta sequence

                              [TTTTTTTTTTTTTCAGAAAGAGCAATACTGATTGCTTGCAAGTTGCAACCCATATATTATGATGGTTTTGAACAGGTCTTATCCTTGGGCAAAACCGCAAAACATGACAATTGCCAAGTAGCATAGGCCATAAAATTTCAAAAGTTAGTAGCAGGATTCTGAATAAACAACAGATCAGGCATACATGTACACAGAAAATGGATAGCAGCATATATCAGG]

[-] EMBL CA754333             [TTTTTTTTTTTTTCAGAAAGAGCAATACTGATTGCTTGCAAGTTGCAACCCATATATTATGATGGTTTTGAACAGGTCTTATCCTTGGGCAAAACCGCAAAACATG                                                                                                                 ]
[+] EMBL OSAA31850            [                      CAATACTGATTGCTTGCAAGTTGCAACCCATATATTATGATGGTTTTGAACAGGTCTTATCCTTGGGCAAAACCGCAAAACATGACAATTGCCAAGTAGCATAGGCCATAAAATTTCAAAAGTTAGTAGCAGGATTCTGAATAAACAACAGATCAGGCATACATGTACACAGAAAATGGATAGCAGCATATATCAGG]




>consensus_1198#0
TTTTTTTTTTTTTCAGAAAGAGCAATACTGATTGCTTGCAAGTTGCAACCCATATATTAT
GATGGTTTTGAACAGGTCTTATCCTTGGGCAAAACCGCAAAACATGACAATTGCCAAGTA
GCATAGGCCATAAAATTTCAAAAGTTAGTAGCAGGATTCTGAATAAACAACAGATCAGGC
ATACATGTACACAGAAAATGGATAGCAGCATATATCAGG

clustalw multiple alignements is not computed in this case