cluster # 11997

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Oryza sativa
cluster # 11997 cluster # 11997 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11997#0 length = 1389 sequences # 7

consensus_11997#1 length = 538 sequences # 1
consensus_11997#2 length = 236 sequences # 1

consensusID : consensus_11997#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1389
fasta sequence

                              [CGAATAAACCCCTCACCACGGCGGCGCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCCCGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCACCTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCAAGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGATCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATCTGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTCTTATGCCTACAAGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGCTAGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCCGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGTGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAATGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCCACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG-CAAACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAGGTTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAACTGTATTTTTGTGATTTCAAAAAAAAAA]

[+] EMBL AK060554             [CGAATAAACCCCTCACCACGGCGGCGCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCCCGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCACCTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCAAGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGGCAAGAAGAGCCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGATCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATCTGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTCTTATGCCTACAAGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGCTAGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCCGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGTGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAATGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCCACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCGCAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG CAAACACTAGGAGAGGATCAGAATTCAGTGAGTTTA                                                                                               ]
[+] EMBL AK103490             [   ATAAACCCCTCACCACGGCGGCGCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCCCGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCACCTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCAAGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGATCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATCTGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTCTTATGCCTACAAGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGCTAGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCCGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGTGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAATGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCCACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGGGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG CAAACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAGGTTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAACTGTATTT                    ]
[+] EMBL AU173105             [                         GCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCCCGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCACCTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCAAGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTAGGGGCAAATCTTTTTATTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK061041             [                                                                                                                                                                                                                                                                                                                                                   TTATGCTATTAAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGATCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATCTGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTCTTATGCCTACAAGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGCTAGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCCGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGTGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAATGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCCACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG CAAACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAGGTTAACTGTATTTTGTTGGAAATACATGAA                                        ]
[+] EMBL CA754603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCCGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGTGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAATGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCCACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGNCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGNCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGGATGTTGGTACCTTTCTTATATNTCCATGTAACTTGNNCAACACTA GAGAGGATCAGAATTCAGTGAGTTTAGCTGACACT                                                                                      ]
[+] EMBL BM418907             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATGAAT GTCA CCT TTTGCCCTCC CAGAATACACA CTACCACCCCACAT CCACCTCAAATGCATTACAGGCCT CAGTGAGACCACCTCCACCAAACATGATGCCACCCCCTCCTCTTGGCATGGTAA GCCTCC CCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCAC ACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG C AACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACCCTGATAC AATTCTCGAGGTTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAACTGTATTTTTGTGATTTCAAAAAAAAAA]
[+] EMBL AU173106             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AACATGATGCCACCCCCTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTGGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCCACCGCCGCCACCACCACCTT TGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGGCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTG CAAACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAGGTTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAAaaa                         ]




>consensus_11997#0
CGAATAAACCCCTCACCACGGCGGCGCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCC
GCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCC
CGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCAC
CTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCA
AGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGG
CTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAA
TATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAG
CCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCT
CCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGA
TCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATC
TGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTC
TTATGCCTACAAGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGCT
AGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCCC
GCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAGT
GCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAAT
GCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGCC
ACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCCC
TCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGTG
GAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGCC
ACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATGG
CACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTGCA
AACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAGG
TTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAACTGTATTTTTGTGATTTCA
AAAAAAAAA

consensusID : consensus_11997#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence

                              [GCGGATTCCGCANTAGCCCCAAAGACAGAGTAACANCTCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATNNAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTNAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTTGGGGCGAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTNCGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCCAGATAATGCGAGATCCTGAAACTGGAAATTCACNANGCTTTGGCTTTGTGAGCTATGACTCCNTTGAATCNTCTNNTNTNGCTATAGAGGCAATGAACAACCNACATCTNTGTTNCCGGCCAATTACTGTCTCTTATGCCTACCCAGAAAGACNCCNAAGGAGAACGCCNTGGCNCACCTGCAGAGAAGTTGCTACCANCAAATACCCNGGTTCTCCNAAAGAATAGGCCNCACCCTATGTTTGCCANTGGNCCCCCTACCC]

[+] EMBL BE228377             [GCGGATTCCGCANTAGCCCCAAAGACAGAGTAACANCTCTACACCAGGGCTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATNNAGATTTTGAATATGATCAAGCTATATGGAAAACCAATAAGAGTNAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTTGGGGCGAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTNCGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCCAGATAATGCGAGATCCTGAAACTGGAAATTCACNANGCTTTGGCTTTGTGAGCTATGACTCCNTTGAATCNTCTNNTNTNGCTATAGAGGCAATGAACAACCNACATCTNTGTTNCCGGCCAATTACTGTCTCTTATGCCTACCCAGAAAGACNCCNAAGGAGAACGCCNTGGCNCACCTGCAGAGAAGTTGCTACCANCAAATACCCNGGTTCTCCNAAAGAATAGGCCNCACCCTATGTTTGCCANTGGNCCCCCTACCC]




>consensus_11997#1
GCGGATTCCGCANTAGCCCCAAAGACAGAGTAACANCTCTACACCAGGGCTATGGATTTG
TAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATNNAGATTTTGAATATGATCAAGC
TATATGGAAAACCAATAAGAGTNAACAAGGCTTCACAAGACAAGAAGAGCCTTGATGTTG
GGGCGAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCTCCTGTNCGATA
CCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCCAGATAATGCGAGATCCTGAAACTG
GAAATTCACNANGCTTTGGCTTTGTGAGCTATGACTCCNTTGAATCNTCTNNTNTNGCTA
TAGAGGCAATGAACAACCNACATCTNTGTTNCCGGCCAATTACTGTCTCTTATGCCTACC
CAGAAAGACNCCNAAGGAGAACGCCNTGGCNCACCTGCAGAGAAGTTGCTACCANCAAAT
ACCCNGGTTCTCCNAAAGAATAGGCCNCACCCTATGTTTGCCANTGGNCCCCCTACCC

consensusID : consensus_11997#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence

                              [TGGNGGCACCANCCACANGCTGGTGGTATGCCGGCACCTCCTAATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAAAGTTCCATACCATATGGCACATTGTAGCTGTAGACTGANGAATGTTGGTACCTTTCTTATATTTCCATGTTNACTTGCAAACACTANGANGAGGATCAGAAATTCANTGAGTTTTAAGCTGAACACTGAATACAAAAT]

[+] EMBL AA754615             [TGGNGGCACCANCCACANGCTGGTGGTATGCCGGCACCTCCTAATGTCCATGCCACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAAAGTTCCATACCATATGGCACATTGTAGCTGTAGACTGANGAATGTTGGTACCTTTCTTATATTTCCATGTTNACTTGCAAACACTANGANGAGGATCAGAAATTCANTGAGTTTTAAGCTGAACACTGAATACAAAAT]




>consensus_11997#2
TGGNGGCACCANCCACANGCTGGTGGTATGCCGGCACCTCCTAATGTCCATGCCACCGCC
GCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAAAGTTCCATACCATATGGCACAT
TGTAGCTGTAGACTGANGAATGTTGGTACCTTTCTTATATTTCCATGTTNACTTGCAAAC
ACTANGANGAGGATCAGAAATTCANTGAGTTTTAAGCTGAACACTGAATACAAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11997#0      CGAATAAACCCCTCACCACGGCGGCGCCGCTTCCGCAACTCTCCTCCTCTCGCCGCCGCC 60
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      GCCGCCGCCGCCCGCCGCCCGCCGGAGCCCGAAGCCGGGCATGACGACGCGCATCGCGCC 120
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CGGCGTGGGCGCCAACCTGCTCGGGCAGCACTCGGCGGAGCGGAACCAGGACGCCACCAC 180
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CTACGTCGGCAACCTCGACCCCCAGGTTTCGGAGGAGTTACTATGGGAATTATTTGTGCA 240
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      AGCAGGCCCTGTTGTTAATGTCTATGTCCCCAAAGACAGAGTAACAAATCTACACCAGGG 300
consensus_11997#1      ----------GCGGATTCCG-CANTAGCCCCAAAGACAGAGTAACANCTCTACACCAGGG 49
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATTAAGATTTTGAA 360
consensus_11997#1      CTATGGATTTGTAGAATTCAGAAGTGAAGAAGATGCAGATTATGCTATNNAGATTTTGAA 109
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      TATGATCAAGCTATATGGAAAACCAATAAGAGTAAACAAGGCTTCACAAGACAAGAAGAG 420
consensus_11997#1      TATGATCAAGCTATATGGAAAACCAATAAGAGTNAACAAGGCTTCACAAGACAAGAAGAG 169
consensus_11997#2      -------------------------------------------------------TGGNG 5
                                                                                * *

consensus_11997#0      CCTTGATGTAGGGGCAAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCT 480
consensus_11997#1      CCTTGATGTTGGGGCGAATCTTTTTATTGGCAATCTCGATCCGGATGTTGACGAAAAGCT 229
consensus_11997#2      GCACCANCCACANGCTGGTGGTAT-GCCGGCACC-----TCCTAATGTCCATGCCACCGC 59
                        *   *       **   *  * *    ****       ***  ****  * *  *    

consensus_11997#0      CCTGTACGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCAAGATAATGCGAGA 540
consensus_11997#1      CCTGTNCGATACCTTCAGTGCGTTTGGAGTGATTGTGACTAATCCCCAGATAATGCGAGA 289
consensus_11997#2      CGCCACCACCACCTTCTGGTTAAACATA-TGCTGGTGAAAAGTTCC-ATACCATATGGCA 117
                       *     *   ****** *         * ** * ****  * * ** * *  **  *  *

consensus_11997#0      TCCTGAAACTGGAAATTCACGAGGCTTTGGCTTTGTGAGCTATGACTCCTTTGAATCATC 600
consensus_11997#1      TCCTGAAACTGGAAATTCACNANGCTTTGGCTTTGTGAGCTATGACTCCNTTGAATCNTC 349
consensus_11997#2      CATTGTAGCTGTAGACTGANGAATGTTGGTACCTTTC--TTATATTTCCAT--GTTNACT 173
                          ** * *** * * * *  *   ** *    * *    ***   *** *    *    

consensus_11997#0      TGATCAAGCTATAGAGGCAATGAACAACCAACATCTATGTAACCGGCCAATTACTGTCTC 660
consensus_11997#1      TNNTNTNGCTATAGAGGCAATGAACAACCNACATCTNTGTTNCCGGCCAATTACTGTCTC 409
consensus_11997#2      TGCAAACACTANGANGAGGATCAGAAATTCA---NTGAGTTTTAAGCTGAACACTGAATA 230
                       *       ***    *   ** *  **   *    *  **     **  *  ****  * 

consensus_11997#0      TTATGCCTACA-AGAAAGACACAAAAGGAGAACGCCATGGCACACCTGCAGAGAGGTTGC 719
consensus_11997#1      TTATGCCTACCCAGAAAGACNCCNAAGGAGAACGCCNTGGCNCACCTGCAGAGAAGTTGC 469
consensus_11997#2      CAAAAT------------------------------------------------------ 236
                         *                                                         

consensus_11997#0      TAGCAGCAAATAACCCTGGTTCTCAGAAGAATAGGCCACACACTATGTTTGCAAGTGGCC 779
consensus_11997#1      TACCANCAAATACCCNGGTTCTCCNAAAGAATAGGCCNCACCCTATGTTTGCCANTGGNC 529
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CGCCTACGCAAGGGCTTGCAAATGGTGCACCTGTGCCTCGACCTTTTTCCAATGGGGCAG 839
consensus_11997#1      CCCCTACCC--------------------------------------------------- 538
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      TGCCACCTCAGATTCAACATGTTCGACCGCCGCCACCTCCTATGCAACAATTCCCTCCAA 899
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      TGCAGATGAATGGTCAGCCTGTTTGGCCTCCGCAGAATACACAGCTACCACCCCACATGC 959
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CACCTCAAATGCATTACAGGCCTGCAGTGAGACCACCTCCACCAAACATGATGCCACCCC 1019
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CTCCTCTTGGCATGGTAAGGCCTCCGCCGCCTCCTTCCAGTATGCCAGCTCCACCTATGT 1079
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      GGAGGCCACCCCCACCCCCACAACAAGCTGGTGGTATGCCACCACCTCCTATGTCCATGC 1139
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      CACCGCCGCCACCACCACCTTCTGGTTAAACATATGCTGGTGAAGGTTCCATACCATATG 1199
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      GCACATTGTAGCTGTAGACTGAGAATGTTGGTACCTTTCTTATATTTCCATGTAACTTGC 1259
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      AAACACTAGGAGAGGATCAGAATTCAGTGAGTTTAGCTGACACTGATACAAATTCTCGAG 1319
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      GTTAACTGTATTTTGTTGGAAATACATGAATTTTGTGGTTAACTGTATTTTTGTGATTTC 1379
consensus_11997#1      ------------------------------------------------------------
consensus_11997#2      ------------------------------------------------------------
                                                                                   

consensus_11997#0      AAAAAAAAAA 1389
consensus_11997#1      ----------
consensus_11997#2      ----------