These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11998#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2130 fasta sequence [TCGCACCCCACACCGCGGGACGATCTATCGGTCAGAAAAAGCGAGCAGAGCGGTGGGGGAGAATGGCGGTGGCGGCGGCGACGGTTCGATGGCTCGTCCTTCTCCTGGCCGTGTCGGCGGCGGCCACGGCGTCGCGCGAGAAGTGGTGGCATGGCGCCGGCGGCGAGGCGAGTGGTGGCGGCCACCTCGTGCAGAAGGAGTGGCGGAGGGTGGTCGCCGCGAGCGACGCTGGCCTGGTGACGGCCGTGGATGTCGCCGACGCGGCCGGCACCGCGTACCGGCTGCACTTCATCACGATGAGCCCCGGGACGCTGTTCCTCCCCGTGCAGCTGCACGCCGACATGGTGTTCTACGTGCACAGCGGGAGGGGCAAGGTGACTTACATAGAAGAAGGGGACAGTGAATCAAGTTCGCTTCAGGTGGAGAGGGGGGACGTCTACAACTTCGATCAGGGTACCATCCTCTACATTCAGAGTAACGCATGCGGCACGAGAGAGCGCCTTCAAATTTACGCCATCTTCACCAGCGACAGCATCAACGCTGATGACCCAAGGCATCCGACATCAGAAGTTTATTCCTTTGTCAGTGACCTGTTGAAAGGATTTGAAGTAGAAGTCCTTCGACCGGGCTTCGGGGTTCCACGCGAAGTTGTGGAATCCATCAAATCGACCAAAACCCCGCCGGCGATCATACCGTATAATCCAGAGGAGGAGGACGAGGACGACTCGTCAAATTGGACGGAGGAAATCACCGACGCGCTGTGGGGAGTGCGAGATCCTCACTTCCTGAACAAGAAGAAGAAGGACAAACAAAAGGACAAGCACAAGGGCAAGGACAAGAAGTCCAAGAGCAAGGCCTTCAACTTCTACTCCGGCAAGCCGGACGTCGAGAACTGCTACGGATGGAGCAGATCGATGACCAACCGAGACCTCGAGACCTTGCGGGGATCCAACATTGGCATGTTCATGGTGAACCTGACCACGGGCGCCATGATGGGACCTCACTGGAACCCGAGAGCGACCGAGATCGCCGTTGTGACCCAGGGCGCGGGGATGGTGCAGATAGTCTGTCCCAGCATCCCGTCCGGCGAGAGCAAGAAGCATCACCACGATGAGGAGGGCGGCCGTGGCGATCACGGCCACGGCGGCGGCGGCGTCCGGTGCAAGAACTCGTTGTTCAGGGTGAAGGAAGGCGACGTGCTCGTGGTGCCGCGGTTCCACCCCATGGCGCAGATATCCTTCAACAACGACTCGTTCGTGTTCGTCGGGTTCAGCACCGACATGGGCCACAACCACCCGCAGTTCCTCGCCGGGAGGCACTACGTCCTGCAGGTGATCGGCAAGGAGATTCTGGCGCGGTCGCTCGGCCAGGACAACTCCACCAACGTCGGGAGGCTGCTGTCGTCGCAGCGCGAGTCGGCGATAATGGCGTGCACCTCCTGCGCGGAGGAGCTGGAGAGGAAGGCGGAGGAGGAGGAAGAGGGTGGTGGAGGGAAGGGGGAGAAAGAGCGGGAGGAGGAAGAGAGGAGGCAGCGGGAGAAAGAGGAGGAAGAAAGGAGGAGACAAGAAGAGGAGAGGAAGAGGAGGGAAGAAGAAGAGAAGGAAAGGAGAGAGCGGGAGGAGGAGGAAAGGAGGCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA-GC--A-GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA-GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT-CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA-CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAGCTTTCCTCTCAAAAAAAAA] [+] EMBL AK102651 [TCGCACCCCACACCGCGGGACGATCTATCGGTCAGAAAAAGCGAGCAGAGCGGTGGGGGAGAATGGCGGTGGCGGCGGCGACGGTTCGATGGCTCGTCCTTCTCCTGGCCGTGTCGGCGGCGGCCACGGCGTCGCGCGAGAAGTGGTGGCATGGCGCCGGCGGCGAGGCGAGTGGTGGCGGCCACCTCGTGCAGAAGGAGTGGCGGAGGGTGGTCGCCGCGAGCGACGCTGGCCTGGTGACGGCCGTGGATGTCGCCGACGCGGCCGGCACCGCGTACCGGCTGCACTTCATCACGATGAGCCCCGGGACGCTGTTCCTCCCCGTGCAGCTGCACGCCGACATGGTGTTCTACGTGCACAGCGGGAGGGGCAAGGTGACTTACATAGAAGAAGGGGACAGTGAATCAAGTTCGCTTCAGGTGGAGAGGGGGGACGTCTACAACTTCGATCAGGGTACCATCCTCTACATTCAGAGTAACGCATGCGGCACGAGAGAGCGCCTTCAAATTTACGCCATCTTCACCAGCGACAGCATCAACGCTGATGACCCAAGGCATCCGACATCAGAAGTTTATTCCTTTGTCAGTGACCTGTTGAAAGGATTTGAAGTAGAAGTCCTTCGACCGGGCTTCGGGGTTCCACGCGAAGTTGTGGAATCCATCAAATCGACCAAAACCCCGCCGGCGATCATACCGTATAATCCAGAGGAGGAGGACGAGGACGACTCGTCAAATTGGACGGAGGAAATCACCGACGCGCTGTGGGGAGTGCGAGATCCTCACTTCCTGAACAAGAAGAAGAAGGACAAACAAAAGGACAAGCACAAGGGCAAGGACAAGAAGTCCAAGAGCAAGGCCTTCAACTTCTACTCCGGCAAGCCGGACGTCGAGAACTGCTACGGATGGAGCAGATCGATGACCAACCGAGACCTCGAGACCTTGCGGGGATCCAACATTGGCATGTTCATGGTGAACCTGACCACGGGCGCCATGATGGGACCTCACTGGAACCCGAGAGCGACCGAGATCGCCGTTGTGACCCAGGGCGCGGGGATGGTGCAGATAGTCTGTCCCAGCATCCCGTCCGGCGAGAGCAAGAAGCATCACCACGATGAGGAGGGCGGCCGTGGCGATCACGGCCACGGCGGCGGCGGCGTCCGGTGCAAGAACTCGTTGTTCAGGGTGAAGGAAGGCGACGTGCTCGTGGTGCCGCGGTTCCACCCCATGGCGCAGATATCCTTCAACAACGACTCGTTCGTGTTCGTCGGGTTCAGCACCGACATGGGCCACAACCACCCGCAGTTCCTCGCCGGGAGGCACTACGTCCTGCAGGTGATCGGCAAGGAGATTCTGGCGCGGTCGCTCGGCCAGGACAACTCCACCAACGTCGGGAGGCTGCTGTCGTCGCAGCGCGAGTCGGCGATAATGGCGTGCACCTCCTGCGCGGAGGAGCTGGAGAGGAAGGCGGAGGAGGAGGAAGAGGGTGGTGGAGGGAAGGGGGAGAAAGAGCGGGAGGAGGAAGAGAGGAGGCAGCGGGAGAAAGAGGAGGAAGAAAGGAGGAGACAAGAAGAGGAGAGGAAGAGGAGGGAAGAAGAAGAGAAGGAAAGGAGAGAGCGGGAGGAGGAGGAAAGGAGGCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA GC A GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAG ] [+] EMBL BI797346 [ gagtcgGGAGGAGGAAAGGA GCAGAGGGAGAAGGAAGAGAAGAAGAGGAGGGAGGAAGAAGACGG AGGAGGAGAGAAGAGGAAGAAGAAGA CGGAGGAGGAGA GAGGAAGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCC AAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTGTAAAaa ] [+] EMBL AU181966 [ GAGGGAAGAGAAGAAGAGGAGGGAGGAAGAAGA GC A GAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCC ] [+] EMBL AA753899 [ ggGAA AAG GGAGGG GG AGNGGA GC GNNGNGAGAA AGGGAGAAGA NNCNGAGGA GAGAGGAAGAGGAGGAGG NCAAGAGGATGGAAG GGAGATGACCCAAAACCGAGGA GGAAGAGGGGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTAGCCTCCTCCCTTCCAAGAACCCGCCTGTAAACGGTTAAGTAAGCTGTTAATGTGTATAAACGTAGCTTTCCTCTCAAAAAAAAA] [+] EMBL AA750686 [ GGAAGAAGA GCGGAGGAGGAGAGAAGAGGAAGAAGAAGAGCGGAGGAGGAGA GAGGAAGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTAAGCAGAGAGGGA ] [+] EMBL OSC21771 [ AGGAAGAAGAAGAGCGGAGGA GAGAGGAAGAGGAGGAGGAGCAAGAGGATGGAAGAGGAGATGAGCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTNGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTNGCTAAGCAAGTTAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTNTAGAGGCCGGNCTGCATA CTACGTGCGTACTTTCGTTTCTTNCACTGTG ] [+] EMBL BI797006 [ agcCCAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGA CGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAA GGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTG ACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGCCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCCCTGTGTCGTGATGTA CTGAGTTAAATAACCTGTTGATGTGTAAAAa ] [+] EMBL AA752318 [ CAAAACCGAGGAGGGAAGAGGAGGAAGGAGACTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATCGGAATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGCGTCCAGCTACAGTAGTTT CTGCGTAAATAATGCTGGTCTTGCTCGTGTAGAGGCCGGCCTGCATA CTACGTGCGTACTTTCGTTTCTTCCACTGTGTCGTGATGTAGCTGAGTTAAATAAGCTGTTGATGTGTATAATCGTA ] [+] EMBL AA749990 [ CTGGGGAGAGCGGCAGATTCGTTTGCCCAGGAGCTTGAAAAAACGCTTCATTGGTATCAAGGGCAGGCTCTCCAGTGGCTAAGCAAGTGAGCAGAGAGGGACATTTGGAGGTGAACGC TCCAGGTACAGTAGTTTCCTCCGTAAATAATGCTGGTCTTCCTCGTGTAGAGGCCGG CTGCATATCTACGTGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||