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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11999#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2370 fasta sequence
[TCCATCTCTCTCTCTCCTCCTCCTCTCTTGCCCTAGAGAGAGAGAGAGAGAGGGAGGGGGCCGCAAGAGAGAGAGAGATCGATCACCGGCCGCCCTCCGGAGCTCGCGCGCTCGTTCGTTCGTTCGTTCGATCATTCGTACGTCCACAACAATTCCGGCGACGCGACCGTCGCCGTACGTTTGCGGTGGCGCGGCAGCGTCGTCGGCGGTGAAGAAGAAGAAGAAGAAGATCGAAGAAGAGGAAGAGGATGGGCAACTGCTGCGTGTCCCGGCCGTCCGGCGCCGACAAGCGGCGGCGCTGCGGCAGCTCCACCGCCCCGCACACCCGCGGCGGCAGGCGGGTGATCGGCGCCGCCAACATGCGGTGCCTCTCCACGGTCTCCTCCGTGTCGGACGCGGCGCGCGCCGTGATGTCGAACGAGCCGGCGACCGTGCTGGGCAACAGCGGCAGCAGCGGCAACGGCGGCGTGATGGCGGCGGAGGAGATGCTGCGGCGGTACGAGATCGGGGAGGAGCTGGGTCGGGGGGAGTTCGGGGTGACGCGGCGGTGCCGGGACGCGGTGACGGGGGAGCGGCTGGCGTGCAAGTCGATCAGCAAGCGGAAGCTCCGGAGCAGCGTGGACGTGGAGGACGTGCGGCGGGAGGTGGCCATCATGCGGTCGCTGCCGGCGCACGCCAACGTGGTGAGGCTCCGGGAGGCGTTCGAGGACGCCGACGCCGTCCACCTCGTCATGGAGGTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCGTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCGCCGTCATGCGCACCATCATGGACGTCGTCCAGCACTGTCACAAGAACGGCGTCATGCATCGGGACCTCAAACCTGAGAACTTTCTGTATGCCAATGCATCTGAGAACTCCCCTCTCAAGGTCATCGACTTCGGCCTCTCAGTGTGCTTCAAACCTGGTGCAAGATTCAATGAGATTGTTGGATCTCCCTACTACATGGCACCAGAAGTCCTGAAGAGAAACTATGGACAAGAAATAGACATATGGAGTGCAGGAGTCATACTGTACATCTTGCTATGTGGTGTTCCTCCTTTCTGGGCCGAGACCGACGAAGGGATCGCACAGGCCATCATCCGGTCACATATCGACTTCCAAAGAGAGCCTTGGCCAAAGGTGTCAGATAATGCCAAGGATCTTGTAAGGAGGATGCTTGATCCAAACCCATATACTCGGTTGACGGCTCAACAGGTTCTAGAGCATCCTTGGATACAGAATGCAAGTGCAGCTCCCAACATTCCTCTGGGAGAAGCAGTCAGGTCCAGGCTGAAGCAATTCACTGTTATGAACAAGTTCAAGAAGAAGGCCTTACTTGTGGTGGCGGAGTACTTACCAACCGAAGAGCTGGATGCAATCAGGGAGCTGTTCAATATGTTGGACACCAAAAAGAAGGGGCACTTGACACTAGAAGAGCTCAGAAAGGGACTGCAAGTGATAGGGCACAACATCCATGACACAGATGTCGATATGCTCATGGAAGCTGCAGACATAGATGGAAATGGCATACTGGATTGCAAGGAGTTTGTGACAGTATCCATTCACCTGAAGAAAATCCGTAGCGATGAGCACCTTCCGAAGGTGTTCAGCTTCTTCGACAAGAACGGCAGCGGGTACATAGAGATCGAAGAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTT-AACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTCATAACTGAGA-GAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCAC-GGGGTTCAGTGA-CCCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAAATAC-ACCCTTTCTCTTTCTCTGAAAACAGAGAAAAAAAAAGAAAGAAAGAGTTGTATCCTTCTGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCACTAACCGCTTTGGTGCAAATT-CTCCGCGGCCGCACAGTAAGGGCCAAAAAAAGAAAGAAGCAATAATATAAGATTGTT]
[+] EMBL AK072981 [TCCATCTCTCTCTCTCCTCCTCCTCTCTTGCCCTAGAGAGAGAGAGAGAGAGGGAGGGGGCCGCAAGAGAGAGAGAGATCGATCACCGGCCGCCCTCCGGAGCTCGCGCGCTCGTTCGTTCGTTCGTTCGATCATTCGTACGTCCACAACAATTCCGGCGACGCGACCGTCGCCGTACGTTTGCGGTGGCGCGGCAGCGTCGTCGGCGGTGAAGAAGAAGAAGAAGAAGATCGAAGAAGAGGAAGAGGATGGGCAACTGCTGCGTGTCCCGGCCGTCCGGCGCCGACAAGCGGCGGCGCTGCGGCAGCTCCACCGCCCCGCACACCCGCGGCGGCAGGCGGGTGATCGGCGCCGCCAACATGCGGTGCCTCTCCACGGTCTCCTCCGTGTCGGACGCGGCGCGCGCCGTGATGTCGAACGAGCCGGCGACCGTGCTGGGCAACAGCGGCAGCAGCGGCAACGGCGGCGTGATGGCGGCGGAGGAGATGCTGCGGCGGTACGAGATCGGGGAGGAGCTGGGTCGGGGGGAGTTCGGGGTGACGCGGCGGTGCCGGGACGCGGTGACGGGGGAGCGGCTGGCGTGCAAGTCGATCAGCAAGCGGAAGCTCCGGAGCAGCGTGGACGTGGAGGACGTGCGGCGGGAGGTGGCCATCATGCGGTCGCTGCCGGCGCACGCCAACGTGGTGAGGCTCCGGGAGGCGTTCGAGGACGCCGACGCCGTCCACCTCGTCATGGAGGTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCGTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCGCCGTCATGCGCACCATCATGGACGTCGTCCAGCACTGTCACAAGAACGGCGTCATGCATCGGGACCTCAAACCTGAGAACTTTCTGTATGCCAATGCATCTGAGAACTCCCCTCTCAAGGTCATCGACTTCGGCCTCTCAGTGTGCTTCAAACCTGGTGCAAGATTCAATGAGATTGTTGGATCTCCCTACTACATGGCACCAGAAGTCCTGAAGAGAAACTATGGACAAGAAATAGACATATGGAGTGCAGGAGTCATACTGTACATCTTGCTATGTGGTGTTCCTCCTTTCTGGGCCGAGACCGACGAAGGGATCGCACAGGCCATCATCCGGTCACATATCGACTTCCAAAGAGAGCCTTGGCCAAAGGTGTCAGATAATGCCAAGGATCTTGTAAGGAGGATGCTTGATCCAAACCCATATACTCGGTTGACGGCTCAACAGGTTCTAGAGCATCCTTGGATACAGAATGCAAGTGCAGCTCCCAACATTCCTCTGGGAGAAGCAGTCAGGTCCAGGCTGAAGCAATTCACTGTTATGAACAAGTTCAAGAAGAAGGCCTTACTTGTGGTGGCGGAGTACTTACCAACCGAAGAGCTGGATGCAATCAGGGAGCTGTTCAATATGTTGGACACCAAAAAGAAGGGGCACTTGACACTAGAAGAGCTCAGAAAGGGACTGCAAGTGATAGGGCACAACATCCATGACACAGATGTCGATATGCTCATGGAAGCTGCAGACATAGATGGAAATGGCATACTGGATTGCAAGGAGTTTGTGACAGTATCCATTCACCTGAAGAAAATCCGTAGCGATGAGCACCTTCCGAAGGTGTTCAGCTTCTTCGACAAGAACGGCAGCGGGTACATAGAGATCGAAGAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTT AACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTCATAACTGAGA GAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCAC GGGGTTCAGTGACCCCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAAATAC ACCCTTTCTCTTTCTCTGAAAACAGAGAAAAAAAAAGAAAGAAAGAGTTGTATCCTTCTGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCACTAACCGCTTTGGTGCAAATT CTCCGCGGCCGCACAGTAAGGGCCAAAAAAAGAAAGAAGCAATAATATAAGATTGTT]
[+] EMBL C22514 [ CTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTT AACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTCATAACTGAGAGGAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTNGTCTCCACATTTTTGGGATGCAAAGGTACCAC GGGGTTCAGTGA CCCTGAATG TTCAGATGCAGATGTCAAAGNGCAGGCTTAAATACAACCCTT ]
[+] EMBL C22515 [ ACCAGCTGTTAAACTAAGTGATGTGGTCTCTACATGCAATGCTCACTGNCTCACTCATAACTNAGA GAATGTGAAAAACATGGCGCAGTTTNCCTTGTTCCCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCACGGGGGTTCAGTGA CCCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAAATAC ACCCTTTCTCTTTCTCTGAAAACAGAGGGAAAAAAAGAAAGAAAGAGTTGTATCCNTCTGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCACTAACCGCTTTGGTGCAAATTNCTC ]
consensusID : consensus_11999#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2057 fasta sequence
[CCTACCTCCTCTCGACTCTTCGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATGCCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCTCCTCCTCCTCTCTCTCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGGGGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCCCCGAGCCGGCGCCCGCGTCCGCGTCCCACCACGACGTGGTGGTTGTTGGCGCCGGGATCATCGGGCTCTCCATCGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCTGCCGTCCCGTGCACCGGCGCCACCGGCGCAGGTACCCTCAGTGCGCGTGCA-TGTGCGTGGGGGGAGTTGGGTAATATGGCCTCTAGGGTTTTGATGTCCCGTTGGTGTGTGCGCTCGCGCAGGGCAGGGATACCTATGGATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTGGCGGTGCGGAGCAAGCAGCTGTGGGAGGAGCTCGCCGCCGAGGTGGATGGCCTCGGGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACTAGTTGGGAGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATCTCAGGCAGGAATACGTGCGGAATGCTTGTCTGCTGCTTCATTGCATGCATTGGAGCCGGAACTCTATGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCAGGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGAGATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGGTGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGCCTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGTGATGCCACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATCATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCCTATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAATGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAGAAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTTTTTCCTACGCTGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCTTTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTGCGACAGGACATGAAGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTCACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGACAGGTTTTCAGGATGACCATTTATCTGGAGGCCCAACTTCAGATCCTCAAGCGTCAAATTACCGCTGTTGTCTTTGTCCATCTTGTGGAACATCTGAGTATATTTATCCATCTCCTCCACCGGTAAATTCTTGGCAACGACCTTCATCGGCAAATGCTTCACAGTGAAGAAGTACACCACATTTGAAGAAAATAAGAATAGTAGCAGCAGGTTCTCTGCAACTTACTCCAAGTGCCTTCTTTTTGAACTTATTCATGGCTGAGAATTGCATCAGTCTGGATCGAACAATCTCTCCGAGCGAAACGTTTGGAGCCCTATCGGCATTCTTGAGCCAAGGATGCTCTGTTTTTTGCAGGAGGAGAAACAATCTCAACTGAGCATGTAATGTAACACTACTTACTGTACATTATTAAAC-TTCCCCCTTTTTGCAATAATGTCAAAGACATGGCAA]
[+] EMBL AK106812 [CCTACCTCCTCTCGACTCTTCGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATGCCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCTCCTCCTCCTCTCTCTCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGGGGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCCCCGAGCCGGCGCCCGCGTCCGCGTCCCACCACGACGTGGTGGTTGTTGGCGCCGGGATCATCGGGCTCTCCATCGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCTGCCGTCCCGTGCACCGGCGCCACCGGCGCAGGTACCCTCAGTGCGCGTGCA TGTGCGTGGGGGGAGTTGGGTAATATGGCCTCTAGGGTTTTGATGTCCCGTTGGTGTGTGCGCTCGCGCAGGGCAGGGATACCTATGGATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTGGCGGTGCGGAGCAAGCAGCTGTGGGAGGAGCTCGCCGCCGAGGTGGATGGCCTCGGGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACTAGTTGGGAGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATCTCAGGCAGGAATACGTGCGGAATGCTTGTCTGCTGCTTCATTGCATGCATTGGAGCCGGAACTCTATGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCAGGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGAGATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGGTGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGCCTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGTGATGCCACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATCATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCCTATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAATGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAGAAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTTTTTCCTACGCTGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCTTTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTGCGACAGGACATGAAGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTCACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGACAGGTTTTCAGGATGACCATTTATCTGGAGGCCCAACTTCAGATCCTCAAGCGTCAAATTACCGCTGTTGTCTTTGTCCATCTTGTGGAACATCTGAGTATATTTATCCATCTCCTCCACCGGTAAATTCTTGGCAACGACCTTCATCGGCAAATGCTTCACAGTGAAGAAGTACACCACATTTGAAGAAAATAAGAATAGTAGCAGCAGGTTCTCTGCAACTTACTCCAAGTGCCTTCTTTTTGAACTTATTCATGGCTGAGAATTGCATCAGTCTGGATCGAACAATCTCTCCGAGCGAAACGTTTGGAGCCCTATCGGCATTCTTGAGCCAAGGATGCTCTGTTTTTTGCAGGAGGAGAAACAATCTCAACTGAGCATGTAATGTAACACTACTTACTGTACATTATTAAAC TTCCCCCTTTTTGCAATAATGTCAAAGACATGGC ]
[+] EMBL AU182850 [ CATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATGCCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCTCCTCCTCCTCTCTCTCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGGGGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCCCCGAGCCGGCGCCCGCGTCCGCGTCCCACCACGACGTGGTGGTTGTTGGCGCCGGGATCATCGGGCTCTCCATCGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCCGCCGTCCCGTGCACCGGCGCCACCGGCGCAGGTACCCTCAGTGCGCGTGCATTGTGCGTGGGGGGAGTTGGGTAATATGGC ]
[+] EMBL CA765066 [ ATGTTCATCTTGATATTGATGAAAACACTGAAAT NGGATCGGGCACCGTCCCTCTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTGCGACAGGACATGAAGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTCACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGACAGGTTTTCAGGATGACCATTTATCTGGAGGCCCAACTTCAGATCCTCAAGCGTCAAATTACCGCTGTTGTCTTTGTCCATCTTGTGGAACATCTGAGTATATTTATCCATCTCCTCCACCGGTAAATTCTCGGCAACGACCTTCATCGGCAAATGCTTCACAGTGAAGAAGTACACCACATTTGAAGAAAATAAGAATAGTAGCAGCAGGTTCTCTGCAACTTACTCCAAGTGCCTTCTTTTTGAACTTATTCATGGCTGAGAATTGCATCAGTCTGGATCGAACAATCTCTCCGAGCGAAACGTTTGGAGCCCTATCGGCATTCTTGAGCCAAGGATGCTCTGNTTTTTGCAGGANGAGAAACAATCTCAACTGAGCATGNAATGNAACACTACNTACTGNACATTATTAAACTTTCCCCCTTTTTGCAATAATGTCAAAGACATGGTAA]
consensusID : consensus_11999#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2043 fasta sequence
[GGTGGCTGCTCCTCCGCCTTCGCGGTTTCCACCAGGATGATCCGCTTCAGCCGCGGCCGCGTGCCGGCGGCCATCCTCCCCGTCACCAGCAACGACGAGCCCTGCTGCAGCTGCTCCCCTGAAAACAACAACAAAAACAACGACGGCGGCGGAGGCGGATGCGACGGCGGCGAGCACCAGAAGGGGAAGTCGTGGAGGAGGTGGCAGTACAGGAGATGCGGCGGCGGTGGCGGTGGCGGGGGCGGGAGGAAGAACGCCATCCTCGGGGACGCGGCCGACGTGAAGACGGCGGCGGGGTTCGCGGAGAGGTACAGGCTGGGGGCGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCTCCGACGCGGCCACCGGGGAGGCCCTGGCCTGCAAGACGATCCGCCGGAAGCGGCTGCGCCGGTGCCGCGGCGACGCCGAGGACGTGCGGCGGGAGGTGGAGATCCTCCGCCGCATCTCCGCCCTCGGCGCCGGCGCCGACTCCGTGGTGCGACTCCGCGACGCCTGCGAGGACTCCGACGGCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCTTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCAAGCTCGCCCGCACCATCGTCGGCGTCGTCCAGCTGTGCCACGAGAACGGGGTGATGCACAGAGACCTGAAGCCGGAGAACTTCCTGTTCGCCAACAAGTCGGAGGACTCACCTCTCAAGGCCATCGATTTCGGCCTCTCGGTGTTCTTCAAGCCAGGAGAAAGATTCACCCAGGTGGTTGGGAGCACATACTACATGGCACCAGAGGTTCTCAACAGAAGCTATGGCCCAGAAGCAGATGTCTGGAGCGCCGGCGTCATCCTCTACATCCTGCTCTGCGGAGTTCCTCCTTTCTGGGGAGACAATGATGAGAAAACGGTGACGGCGATACTCCAGGGTGGGATCAACTTCCAGAGGGAGCCATGGCCCAAGGTGTCCCCGCATGCAAAGGACCTTGTCAGCAAGATGCTTGACCCCGATCCTTCTACCCGGTTGACAGCAAAGGAAGTCCTTGAGCATCCTTGGCTCAAGAATGCCGATAGGGCTCCAAACGTTTCGCTCGGAGAGATTGTTCGATCCAGACTGATGCAATTCTCAGCCATGAATAAGTTCAAAAAGAAGGCACTTGGAGTCGTTGCCAAGAATTTACCGGTGGAGGAGATGGATAAATATACTCAGATGTTCCACAAGATGGACAAAGACAACAGCGGTAATTTGACGCTTGAGGATCTGAAGTTGGGCCTCCAGATAAATGGTCATCCTGTTCCAGAGACAGAGATCGAAATGCTGTTAGAAGCTGGTGACATAGATGGAAATGGAACATTAGATTGCGAGGAGTTTGTAACGGTATTACTTCACATATAGAAGATGAGTAATGAGGAGTACCTACCTAAAGCTTTCAAGTTCTTCGACAAAGATGGTAATGGTTTCATTGAAATGGAGGAGTTGATGGATGCTTTAGGTGATGAACTGGGCCCTACTGAGCAAGTGGTTAAAGATATTATTCGAGACATTGACACTGATAAGGATGGTCGCATTAGCTATCAGGAGTTTGAATCAATGATGATATCTGGATCAGACTGGAGAAATGCTTCCCGACGATACTCAAAAGCAAATTTCAGCTCCCTCAGTCGTAAGCTGTGCAAAGGAAATTCATGAAACAGAGGAGGATCTGAGCAACAGTTACTTACTGAGTGCATCAAGCAATCAACTAAAAACAAAGCATCAGTGGACAGCCTAAAATATAAAACCAGATTACTGGGTAGAGGACATCAGCAGGGTGAAAGGAGATTTTGTATCTCAGTTGCATAGATGACAAGGTTCATCAAGCAGCGAGCCCTATAGCATCGTCCCTTGTAATGGAATCAAGACATTCCATATCTAGGATATATATTCATGACTTAGCATAGGCACATGTAAGGGAAGCGCCGACATGCAATCCACTTACCAAATGTTGATGTTTTACTACTT]
[+] EMBL AK100474 [GGTGGCTGCTCCTCCGCCTTCGCGGTTTCCACCAGGATGATCCGCTTCAGCCGCGGCCGCGTGCCGGCGGCCATCCTCCCCGTCACCAGCAACGACGAGCCCTGCTGCAGCTGCTCCCCTGAAAACAACAACAAAAACAACGACGGCGGCGGAGGCGGATGCGACGGCGGCGAGCACCAGAAGGGGAAGTCGTGGAGGAGGTGGCAGTACAGGAGATGCGGCGGCGGTGGCGGTGGCGGGGGCGGGAGGAAGAACGCCATCCTCGGGGACGCGGCCGACGTGAAGACGGCGGCGGGGTTCGCGGAGAGGTACAGGCTGGGGGCGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCTCCGACGCGGCCACCGGGGAGGCCCTGGCCTGCAAGACGATCCGCCGGAAGCGGCTGCGCCGGTGCCGCGGCGACGCCGAGGACGTGCGGCGGGAGGTGGAGATCCTCCGCCGCATCTCCGCCCTCGGCGCCGGCGCCGACTCCGTGGTGCGACTCCGCGACGCCTGCGAGGACTCCGACGGCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCTTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCAAGCTCGCCCGCACCATCGTCGGCGTCGTCCAGCTGTGCCACGAGAACGGGGTGATGCACAGAGACCTGAAGCCGGAGAACTTCCTGTTCGCCAACAAGTCGGAGGACTCACCTCTCAAGGCCATCGATTTCGGCCTCTCGGTGTTCTTCAAGCCAGGAGAAAGATTCACCCAGGTGGTTGGGAGCACATACTACATGGCACCAGAGGTTCTCAACAGAAGCTATGGCCCAGAAGCAGATGTCTGGAGCGCCGGCGTCATCCTCTACATCCTGCTCTGCGGAGTTCCTCCTTTCTGGGGAGACAATGATGAGAAAACGGTGACGGCGATACTCCAGGGTGGGATCAACTTCCAGAGGGAGCCATGGCCCAAGGTGTCCCCGCATGCAAAGGACCTTGTCAGCAAGATGCTTGACCCCGATCCTTCTACCCGGTTGACAGCAAAGGAAGTCCTTGAGCATCCTTGGCTCAAGAATGCCGATAGGGCTCCAAACGTTTCGCTCGGAGAGATTGTTCGATCCAGACTGATGCAATTCTCAGCCATGAATAAGTTCAAAAAGAAGGCACTTGGAGTCGTTGCCAAGAATTTACCGGTGGAGGAGATGGATAAATATACTCAGATGTTCCACAAGATGGACAAAGACAACAGCGGTAATTTGACGCTTGAGGATCTGAAGTTGGGCCTCCAGATAAATGGTCATCCTGTTCCAGAGACAGAGATCGAAATGCTGTTAGAAGCTGGTGACATAGATGGAAATGGAACATTAGATTGCGAGGAGTTTGTAACGGTATTACTTCACATATAGAAGATGAGTAATGAGGAGTACCTACCTAAAGCTTTCAAGTTCTTCGACAAAGATGGTAATGGTTTCATTGAAATGGAGGAGTTGATGGATGCTTTAGGTGATGAACTGGGCCCTACTGAGCAAGTGGTTAAAGATATTATTCGAGACATTGACACTGATAAGGATGGTCGCATTAGCTATCAGGAGTTTGAATCAATGATGATATCTGGATCAGACTGGAGAAATGCTTCCCGACGATACTCAAAAGCAAATTTCAGCTCCCTCAGTCGTAAGCTGTGCAAAGGAAATTCATGAAACAGAGGAGGATCTGAGCAACAGTTACTTACTGAGTGCATCAAGCAATCAACTAAAAACAAAGCATCAGTGGACAGCCTAAAATATAAAACCAGATTACTGGGTAGAGGACATCAGCAGGGTGAAAGGAGATTTTGTATCTCAGTTGCATAGATGACAAGGTTCATCAAGCAGCGAGCCCTATAGCATCGTCCCTTGTAATGGAATCAAGACATTCCATATCTAGGATATATATTCATGACTTAGCATAGGCACATGTAAGGGAAGCGCCGACATGCAATCCACTTACCAAATGTTGATGTTTTACTACTT]
consensusID : consensus_11999#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1875 fasta sequence
[CCTCTCGACTCTTCGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATGCCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCACCTACCTCCTCTCTCTCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGGGGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCCCCGAGCCGGCGCCCGCGTCCGCGTCCCACCACGACGTGGTGGTTGTTGGCGCAGGGATCATCGGGCTCTCCATCGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCCGCCGTCCCGTGCACCGGCGCCACCGGCGCAGGGCAGGGATACCTATGGATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTGGCGGTGCGGAGCAAGCAGCTGTGGGAGGAGCTCGCCGCCGAGGTGGATGGCCTCGGGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACTAGTTGGGAGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATCTCAGGCAGGAATACGTGCGGGATGCTTGTCTGCTGCTTCATTGCATGCATTGGAGCCGGAACTCTATGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCAGGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGAGATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGGTGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGCCTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGTGATGCCACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATCATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCCTATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAATGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAGAAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTCTTTCCTACGCTGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCTTTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTGCGACAGGACATGAAGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTCACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGACAGGTTTTCAGCTTACGACTGAGGGAGCTGAAATTTGCTTTTGAGTATCGTCGGGAAGCATTTCTCCAGTCTGATCCAGATATCATCATTGATTCAAACTCCTGATAGCTAATGCGACCATCCTGTTGAATATATGCACAACATGTCAGTTATACTATTGAAGTATTGATACATGTGTGTAAAGTGTAAACCCCAACTGGAAAAAAAAACATGGATAGGAAACCATCAAATTACTGTTGCTTCCTGGGTTTCTTGTACACTTGGATGAGGATCCAAGATATTTTGCTAAAAAAAAGAAGAGAAGACTAAGTTTAGTAGACTATGCCTAGAATTCAGCAAGTTTTGTGAAATGGGAATTTGTTGCTG]
[+] EMBL AK103415 [CCTCTCGACTCTTCGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATGCCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCACCTACCTCCTCTCTCTCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGGGGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCCCCGAGCCGGCGCCCGCGTCCGCGTCCCACCACGACGTGGTGGTTGTTGGCGCAGGGATCATCGGGCTCTCCATCGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCCGCCGTCCCGTGCACCGGCGCCACCGGCGCAGGGCAGGGATACCTATGGATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTGGCGGTGCGGAGCAAGCAGCTGTGGGAGGAGCTCGCCGCCGAGGTGGATGGCCTCGGGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACTAGTTGGGAGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATCTCAGGCAGGAATACGTGCGGGATGCTTGTCTGCTGCTTCATTGCATGCATTGGAGCCGGAACTCTATGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCAGGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGAGATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGGTGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGCCTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGTGATGCCACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATCATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCCTATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAATGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAGAAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTCTTTCCTACGCTGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCTTTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTGCGACAGGACATGAAGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTCACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGACAGGTTTTCAGCTTACGACTGAGGGAGCTGAAATTTGCTTTTGAGTATCGTCGGGAAGCATTTCTCCAGTCTGATCCAGATATCATCATTGATTCAAACTCCTGATAGCTAATGCGACCATCCTGTTGAATATATGCACAACATGTCAGTTATACTATTGAAGTATTGATACATGTGTGTAAAGTGTAAACCCCAACTGGAAAAAAAAACATGGATAGGAAACCATCAAATTACTGTTGCTTCCTGGGTTTCTTGTACACTTGGATGAGGATCCAAGATATTTTGCTAAAAAAAAGAAGAGAAGACTAAGTTTAGTAGACTATGCCTAGAATTCAGCAAGTTTTGTGAAATGGGAATTTGTTGCTG]
consensusID : consensus_11999#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[GAGACAAGGGGGAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTTAACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTCATAACTGAGAGAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCACGGGGTTCAATGACCCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAATTACACCCTTTCTCTTTCTCTGAAAACAGAGGGAGAAAAAGAAAGGAAGAGTTGTATCCTTCCGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCCCTAAAAAAAAAAAA]
[-] EMBL CA759700 [GAGACAAGGGGGAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTTAACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTCATAACTGAGAGAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCACGGGGTTCAATGACCCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAATTACACCCTTTCTCTTTCTCTGAAAACAGAGGGAGAAAAAGAAAGGAAGAGTTGTATCCTTCCGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCCCTAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11999#0 TCCATCTCTCTCTCTCCTCCTCCTCTCTTGCCCTAGAGAGAGAGAGAGAGAGGGAGGGGG 60
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 ------------------------------------------------------------
consensus_11999#1 ------------------------------------------------------------
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 CCGCAAGAGAGAGAGAGATCGATCACCGGCCGCCCTCCGGAGCTCGCGCGCTCGTTCGTT 120
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 ------------------------------------------------------------
consensus_11999#1 ------------------------------------------------------------
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 CGTTCGTTCGATCATTCGTACGTCCACAACAATTCCGGCGACGCGACCGTCGCCGTACGT 180
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 ------------------------------------------------------------
consensus_11999#1 ------------------------------------------------------------
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 TTGCGGTGGCGCGGCAGCGTCGTCGGCGGTGAAGAAGAAGAAGAAGAAGATCGAAGAAGA 240
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 ---------GGTGGCTGCTCCTCCGCCTTCGCGGTTTCCACCAGGATGATCCGCTTCAGC 51
consensus_11999#1 ----------------------------------------CCTACCTCCTCTCGACTCTT 20
consensus_11999#3 -----------------------------------------------CCTCTCGACTCTT 13
consensus_11999#0 GGAAGAGGATGGGCAACTGCTGCGTGTCCCGGC-CGTCCGGCGCCGACAAGCGGCGGC-G 298
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CGCGGCCGCGTGCCGGCGGCCATCCTCCCCGTCACCAGCAACGACGAGCCCTGCTGCA-G 110
consensus_11999#1 CGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATG 80
consensus_11999#3 CGAGCTCATCACTCATCACCTCGTCTCGCCGCCGCTCACCACACCACCTTCCGATGGATG 73
consensus_11999#0 CTGCGGCAGCTCCACCGCCCCGCACACCCGCGGCGGCAGGCGGGTGATCGGCGCCGCCAA 358
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CTGCTCCCCTGAAAACAACAACAAAAACAACGACGGCGGCGGAGGCGGATGCGACGGCGG 170
consensus_11999#1 CCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCTCCT-CCTCCTCTCTC 139
consensus_11999#3 CCACCGCCTTCGCCTCCGCTCCGAACCCTAGCCACGCGCCCTCCACCTACCTCCTCTCTC 133
consensus_11999#0 CATGCGGTGCCTCTCCACGGTCTCCTCCGTGTCGGACGCGGCGCGCGCCGTGATGTCGAA 418
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CGAGCACCAGAAGGGGAAGTCGTGGAGGAGGTGGCAGTACAGGAGATGCGGCGGCGGTGG 230
consensus_11999#1 TCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGG 199
consensus_11999#3 TCCGCCTCGTACTCGCGGGTTCTCCGCTTCTCCGTCCGCGACCCGTGGCGGCGGCGGCGG 193
consensus_11999#0 CGAGCCGGCGACCGTGCTGGGCAACAGCGGCAGCAGCGGCAACGGCGGCGTGATGGCGGC 478
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CGGTGGCGGGGGCGGGAGGAAGAACGCCATCCTCGGGGACGCGGCCGACGTGAAGACGGC 290
consensus_11999#1 GGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCC----CCGAGCCGGCGCCCGC 255
consensus_11999#3 GGGCAGCGCCTCCCGCTCCACGCGCTCCGATCGCAGCGCC----CCGAGCCGGCGCCCGC 249
consensus_11999#0 GGAGGAGATGCTGCGGCGGTACGAGATCGGGGAGGAGCTGGGTCGGGGGGAGTTCGGGGT 538
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GGCGGGGTTCGCGGAGAGGTACAGGCTGGGGGCGGAGCTGGGGCGCGGGGAGTTCGGGGT 350
consensus_11999#1 GTCCGCGTCCC---ACCACGACGTGGTGGTTGTTGGCGCCGGGATCATCGGGCTCTCCAT 312
consensus_11999#3 GTCCGCGTCCC---ACCACGACGTGGTGGTTGTTGGCGCAGGGATCATCGGGCTCTCCAT 306
consensus_11999#0 GACGCGGCGG-TGCCGGGACGCGGTGACGGGGGAGCGGCTGGCGTGCAAGTCGATCAGC- 596
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GACGCGGCGG-TGCTCCGACGCGGCCACCGGGGAGGCCCTGGCCTGCAAGACGATCCGCC 409
consensus_11999#1 CGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCTG--CCGTC 370
consensus_11999#3 CGCGCGCCACCTCCTCCTCCACACCCCGCTCTCCGTCGCCGTCGCGGACGCCG--CCGTC 364
consensus_11999#0 --AAGCGGAAGCTCCGGAGCAGCGTGGACGTGGAGGACGTGCGGCGGGAGGTGGCCATCA 654
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GGAAGCGGCTGCGCCGGTGCCGCGGCGACGCCGAGGACGTGCGGCGGGAGGTGGAGATCC 469
consensus_11999#1 CCGTGCACCGGCGCCACCGGCGCAGGTACCCTCAGTGCGCGTGCATGTGCGTGGGGGGAG 430
consensus_11999#3 CCGTGCACCGGCGCCACCGGCGCAGG---------------------------------- 390
consensus_11999#0 TGCGGTCGCTGCCGGCGCACGCCAACG------------TGGTGAGGCTCCGGGAGGCGT 702
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TCCGCCGCATCTCCGCCCTCGGCGCCGGCGCCGACTCCGTGGTGCGACTCCGCGACGCCT 529
consensus_11999#1 TTGGGTAATATGGCCTCTAGGGTTTTGATGTC---CCGTTGGTGTGTGCGCTCGCGCAGG 487
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 TCGAGGACGCCGACGCCGTCCACCTCGTCATGGAGGTCTGCGAGGGCGGCGAGCTCTTCG 762
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GCGAGGACTCCGACGGCGTCCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCG 589
consensus_11999#1 GCAGGGATACCTATGG-----ATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTG 542
consensus_11999#3 GCAGGGATACCTATGG-----ATGTCACACCGGACGCCCGGGAGTGACACGTGGGAGCTG 445
consensus_11999#0 ACCGCATCGTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCGCCGTCATGCGCACCA 822
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 ACCGCATCTTCGCCCGCGGCCACTACACCGAGCGCGCCGCCGCCAAGCTCGCCCGCACCA 649
consensus_11999#1 GCGGTG-CGGAGCAAGCAGCTGTGG----GAGGAGCTCGCCGCCGAGGTGGATGGCCTCG 597
consensus_11999#3 GCGGTG-CGGAGCAAGCAGCTGTGG----GAGGAGCTCGCCGCCGAGGTGGATGGCCTCG 500
consensus_11999#0 TCATGGACGTCGTCCAGCACTGTCACAAGAACGGCGTCATGCATCGGGACCTCAAACCTG 882
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TCGTCGGCGTCGTCCAGCTGTGCCACGAGAACGGGGTGATGCACAGAGACCTGAAGCCGG 709
consensus_11999#1 GGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACT-AGTTGGG 656
consensus_11999#3 GGGGCGGCGGTGCGCGGGAGAGGCTGGGGTGGATGAGGACAGGAAGCTTACT-AGTTGGG 559
consensus_11999#0 AGAACTTTCTGTATGCCAATGCATCTGAGAACTCCCCTCTCAAGGTCATCGACTTCGGCC 942
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 AGAACTTCCTGTTCGCCAACAAGTCGGAGGACTCACCTCTCAAGGCCATCGATTTCGGCC 769
consensus_11999#1 AGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATC---TCAGGCA 713
consensus_11999#3 AGAACTTCCGAAGAGATGGCTACATTGGAGGAAAGGACCAAAGCTCTATC---TCAGGCA 616
consensus_11999#0 TCTCAGTGTGCTTCAAACCTGGTGCAAGATTCAATGAGATTGTTGGATCTCCCTACTACA 1002
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TCTCGGTGTTCTTCAAGCCAGGAGAAAGATTCACCCAGGTGGTTGGGAGCACATACTACA 829
consensus_11999#1 GGAATACGTGCGGAATGCTTGTCTGCTGCTTCATT-GCATGCATTGGAGCCGGAACTCTA 772
consensus_11999#3 GGAATACGTGCGGGATGCTTGTCTGCTGCTTCATT-GCATGCATTGGAGCCGGAACTCTA 675
consensus_11999#0 TGGCACCAGAAGTCCTGAAGAGAAACTATGGACAAGAAATAGACATATGGAGTGCAGGAG 1062
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TGGCACCAGAGGTTCTCAACAGAAGCTATGGCCCAGAAGCAGATGTCTGGAGCGCCGGCG 889
consensus_11999#1 TGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCA 832
consensus_11999#3 TGTTGGACATGATGGGGGTGCTATGTTCTTGCCTGAAGACTGCCAGATTGATGCCTTCCA 735
consensus_11999#0 TCATACTGTACATCTTGCTATGTGGTGTTCCTCCTTTCTGGGCCGAGACCGACGAAGGGA 1122
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TCATCCTCTACATCCTGCTCTGCGGAGTTCCTCCTTTCTGGGGAGACAATGATGAGAAAA 949
consensus_11999#1 GGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGA 892
consensus_11999#3 GGCTGTCTCATTGATTGAAAAGACCAATGGTTCATATTCCTCAGAAGGAAGATATATGGA 795
consensus_11999#0 TCGCACAGGCCATCATCCGGTCACATATCGACTTCCAAAGAGAGCC---TTGGCCAAAGG 1179
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CGGTGACGGCGATACTCCAGGGTGGGATCAACTTCCAGAGGGAGCC---ATGGCCCAAGG 1006
consensus_11999#1 GATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGG 952
consensus_11999#3 GATCTATAATGATCCTGCCATGTCATTAGTAAGATCAGAGACTACTGGAACAGTTCAAGG 855
consensus_11999#0 TGTCAGATAATGCCAAGG-ATCTTGTAAGGAGGATGCTTGATCCAAACCCATATACTCGG 1238
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TGTCCCCGCATGCAAAGG-ACCTTGTCAGCAAGATGCTTGACCCCGATCCTTCTACCCGG 1065
consensus_11999#1 TGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGC 1012
consensus_11999#3 TGTCCAAACATCTAAGCACATCCTATATGGCAGAAAAGCTATTGTAATTGCTTCTGGTGC 915
consensus_11999#0 TTGACGGCTCAACAGGTTCTAGAGCATCCTTGGATACAGAATGCAAGTGCAGCTCCCAAC 1298
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TTGACAGCAAAGGAAGTCCTTGAGCATCCTTGGCTCAAGAATGCCGATAGGGCTCCAAAC 1125
consensus_11999#1 CTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGT 1072
consensus_11999#3 CTGGACTCGAACCTTATTGCGTAGTTTTCTTGAACCGAATCCTACATTGGACATTCCTGT 975
consensus_11999#0 ATTCCTCTGGGAGAAGCAGTCAGGTCCAGGCTGAAGCAATTCACTGTTATGAACAAGTTC 1358
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GTTTCGCTCGGAGAGATTGTTCGATCCAGACTGATGCAATTCTCAGCCATGAATAAGTTC 1185
consensus_11999#1 GATGC-CACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATC 1131
consensus_11999#3 GATGC-CACGTAAGGGTCATTTGCTTGTGTTGGATAAATTTGACAAGCTTAAACTAAATC 1034
consensus_11999#0 AAGAA--GAAGGCCTTACTTGTGGTGG-CGGAGTACTTACCAACCGAAGAGCTGGATGCA 1415
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 AAAAA--GAAGGCACTTGGAGTCGTTG-CCAAGAATTTACCGGTGGAGGAGATGGATAAA 1242
consensus_11999#1 ATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCC 1191
consensus_11999#3 ATGGACTAATGGAGCTAGGATACGTTGGCCATCAAGTTGCTAAATCAAGCGGCACACCCC 1094
consensus_11999#0 ATCAGGGAGCTGTTCAATATGTTGGACACCAA---AAAGAAGGGGCACTTGACACTAGAA 1472
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 TATACTCAGATGTTCCACAAGATGGACAAAGA---CAACAGCGGTAATTTGACGCTTGAG 1299
consensus_11999#1 TATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAA 1251
consensus_11999#3 TATCTTCAGAATCCAGTGAAGATGAGCATGGTGCTTTATCCATATCAATGACCGCAACAA 1154
consensus_11999#0 GAGCTCAGAAAGGGACTGCAAGTGATAGGGCACAACATCCATGACACAGATGTCGATATG 1532
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GATCTGAAGTTGGGCCTCCAGATAAATGGTCATCCTGTTCCAGAGACAGAGATCGAAATG 1359
consensus_11999#1 TGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAG 1311
consensus_11999#3 TGAATACAAAGGGAAATTTAATCCTAGGAAGCAGTCGAGAGTTTAAAGGATTTTCAAGAG 1214
consensus_11999#0 CTCATGGAAGCTGCAGACATAGATGGAAATGGCATACTGGATTGCAAGGAGTTTGTGACA 1592
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 CTGTTAGAAGCTGGTGACATAGATGGAAATGGAACATTAGATTGCGAGGAGTTTGTAACG 1419
consensus_11999#1 AAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTTTTTCCTACGC 1371
consensus_11999#3 AAGTTGACATGTCCATCCTTAAATGTATATGGGACCGTGCAGCAGAGTTCTTTCCTACGC 1274
consensus_11999#0 GTATCCATTCACCTGAAGAAAATCCGTAGCGATGAGCACCTTCCGAAGGTGTTCAGCTTC 1652
consensus_11999#4 ------------------------------------------------------------
consensus_11999#2 GTATTACTTCACATATAGAAGATGAGTAATGAGGAGTACCTACCTAAAGCTTTCAAGTTC 1479
consensus_11999#1 TGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCT 1431
consensus_11999#3 TGAAGAATGTTCATCTTGATATTGATGAAAACACTGAAATCAGGATCGGGCACCGTCCCT 1334
consensus_11999#0 TTCGACAAGAACGGCAGCGGGTACATAGAGATCGAA--GAGTTGAAAGAAGCCCTCTCCC 1710
consensus_11999#4 -------------------------GAGACAAGGGG--GAGTTGAAAGAAGCCCTCTCCC 33
consensus_11999#2 TTCGACAAAGATGGTAATGGTTTCATTGAAATGGAG--GAGTTGATGGATGCTTTAGGTG 1537
consensus_11999#1 TTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTG 1491
consensus_11999#3 TTATGCCTGATGGGAAGCCAGTTATTGGATCTGTTCCTGATCTGCCAAATGTTTTGATTG 1394
** ** ** * * *
consensus_11999#0 CAAGAGGTGACC------AGAAGTCGATCGACGACATATTTCTGGA-TGTTGACATAGAC 1763
consensus_11999#4 CAAGAGGTGACC------AGAAGTCGATCGACGACATATTTCTGGA-TGTTGACATAGAC 86
consensus_11999#2 ATGAACTGGGCCCTACTGAGCAAGTGGTTAAAGATATTATTCGAGA-CATTGACACTGAT 1596
consensus_11999#1 CGACAGGACATGA----AGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTC 1547
consensus_11999#3 CGACAGGACATGA----AGGAAGTGGACTTGCTTTGGCATTAGGCACTGCTGAAATGGTC 1450
* * * * ** * *** * *
consensus_11999#0 AAGGATGGGAAGATAAGCTAC---GAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGAC 1820
consensus_11999#4 AAGGATGGGAAGATAAGCTAC---GAGGAGTTTGAGTTAATGATGTCAGCCGGAATGGAC 143
consensus_11999#2 AAGGATGGTCGCATTAGCTAT---CAGGAGTTTGAATCAATGATGATATCTGGATCAGAC 1653
consensus_11999#1 ACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGAC 1607
consensus_11999#3 ACCGACATGATTCTTGGGAATCCTGGAAAAGTGGACTTCTCGCCATTCTCCATAAAAGAC 1510
* ** * * * * * ** * * * * ***
consensus_11999#0 TGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATA 1880
consensus_11999#4 TGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTCAGCCGCAAGATA 203
consensus_11999#2 TGGAGAAATGCTTCCCGACGATACTCAAAAGCAAATTTCAGCTCCCTCAGTCGTAAGCTG 1713
consensus_11999#1 AGGTTTTCAGGATGACCATTTATCTGGAGGCCCAACTTCAG-ATCCTCAAGCGTCAAATT 1666
consensus_11999#3 AGGTTTTCAGCTT-ACGACTGA---GGGAGCTGAAATTT---GCTTTTGAGTATCG---- 1559
** * * * * *
consensus_11999#0 TTCAAGGAAGTGTCCCTGAAGCTTG-ATCACAGTGGTCCACTTGTTGCAGCAGGAAAATA 1939
consensus_11999#4 TTCAAGGAAGTGTCCCTGAAGCTTG-ATCACAGTGGTCCACTTGTTGCAGCAGGAAAATA 262
consensus_11999#2 TGCAAAGGAA-ATTCATGAAACAGA-GGAGGATCTGAGCAACAGTTACTTACTGAGTGCA 1771
consensus_11999#1 ACCGCTGTTGTCTTTGTCCATCTTGTGGAACATCTGAGTA-TATTTATCCATCTCCTCCA 1725
consensus_11999#3 -TCGG-GAAGCATTTCTCCAGTCTG------ATCCAGATA-TCATCATTGATTCAAACTC 1610
* * * * * * * *
consensus_11999#0 GCAACCAGCTGTTAACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTC-A 1998
consensus_11999#4 GCAACCAGCTGTTAACTAAGTGATGTGTTCTCTACATGCAATGCTCACTGCCTCACTC-A 321
consensus_11999#2 TCAAGCAA---TCAACTAAA-AACAAAGCATCAGTGGACAGCCTAAAATATAAAACCAGA 1827
consensus_11999#1 CCGGTAAATTCTTGGC--AACGACCT-TCATCGGCAAATGCTTCACAGTGAAGAAGTACA 1782
consensus_11999#3 CTGATAGCTAAT--GC--GACCATCC-TGTTGAATATATGCACAACAT--GTCAGTTATA 1663
* * * * * *
consensus_11999#0 TAAC--TGAGAGAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCA 2056
consensus_11999#4 TAAC--TGAGAGAATGTGAAAAACATGGCGCAGTTTTCCTTGTTCGCGTATTGGTCTCCA 379
consensus_11999#2 TTAC--TGGGTAGAGGACATCAGCAGGGTGAAAG-----------GAGATTTTGTATCTC 1874
consensus_11999#1 CCACATTTGAAGAAAATAAGAATAGTAGCAGCAGGTTCTCTGCAACTTACTCCAAGTGCC 1842
consensus_11999#3 CTA---TTGAAGTATTGATACATGTGTGTAAAGTGTAAACCCCAACTGGAAAAAAAAACA 1720
* * * * *
consensus_11999#0 CATTTTTGGGATGCAAAGGTACCACGGGGTTCAGTGACCCTGAATGTTTCAGATGCAGAT 2116
consensus_11999#4 CATTTTTGGGATGCAAAGGTACCACGGGGTTCAATGACCCTGAATGTTTCAGATGCAGAT 439
consensus_11999#2 AGTTGCATAGATGACAAGGTTCATCAAG---CAGCGAGCCCTATAGCATCGTCCCTTGTA 1931
consensus_11999#1 TTCTTTTTGAACTTATTCATGGCTGAGA----ATTGCATCAGTCTGGATCGAACAATCTC 1898
consensus_11999#3 TGGATAGGAAACCATCAAATTACTG--------TTGCTTC---CTGGGTTTCTTGTACAC 1769
* * * * * *
consensus_11999#0 GTCAAAGAGCAGGCTTAAATACACCCTTTCTCTTTCTCTGAAAACAGAGAAAAAAAAAGA 2176
consensus_11999#4 GTCAAAGAGCAGGCTTAATTACACCCTTTCTCTTTCTCTGAAAACAGAGGGAGAAAAAGA 499
consensus_11999#2 ATGGAATCAAGACATTCCATATCTAGGATATATATTCATGACTTAGCATAGGCACATGTA 1991
consensus_11999#1 TCCGAGCGAAACGTTTGGAGCCCT---ATCGGCATTCTTGAGCCAAGGATGCTCTGTTTT 1955
consensus_11999#3 TTGGAT---GAGGATCCAAGATAT---TTTGCTAAAAAAAAGAAGAGAAGACTAAGTTTA 1823
* * * *
consensus_11999#0 AAGAAAGAGTTGTATCCTTCTGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACC 2236
consensus_11999#4 AAGGAAGAGTTGTATCCTTCCGACTTTGAAGTCACTCTCCATGTTTGTTAATGTAAAACC 559
consensus_11999#2 AGGGAAGCG----------CCGACATGCAATCCACTTACCAAA--TGTTGATGTTTTACT 2039
consensus_11999#1 TTGCAGGAGGAGAAACAATCTCAACTGAGCATGTAATGTAACACTACTTACTGTACATTA 2015
consensus_11999#3 GTAGACTATGCCTAGAATTCAGCAAGTTTTGTGAAATGGGA-ATTTGTTGCTG------- 1875
* * * ** **
consensus_11999#0 AGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCACTAA 2296
consensus_11999#4 AGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGGCAGCAATGCCCTGTACCCCTAA 619
consensus_11999#2 ACTT-------------------------------------------------------- 2043
consensus_11999#1 TTAAACTTCCCCCTTTTTGCAATAATGTCAAAGACATGGCAA------------------ 2057
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 CCGCTTTGGTGCAAATTCTCCGCGGCCGCACAGTAAGGGCCAAAAAAAGAAAGAAGCAAT 2356
consensus_11999#4 AAAAAAAAAA-------------------------------------------------- 629
consensus_11999#2 ------------------------------------------------------------
consensus_11999#1 ------------------------------------------------------------
consensus_11999#3 ------------------------------------------------------------
consensus_11999#0 AATATAAGATTGTT 2370
consensus_11999#4 --------------
consensus_11999#2 --------------
consensus_11999#1 --------------
consensus_11999#3 --------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||