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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 12 cluster # 12       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12#0 length = 676 sequences # 2  

consensusID : consensus_12#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 676
fasta sequence
                              [ACTCCATACATTTTTATAACAAAAAGAACATTCAAAAATGTCCTCAGCTCCNACAAAAAAACAAACATTCAAAGTTGCTGATATCAGCTTAGCTGAATGGGGAAGAAAAGAAATCACATTAGCTGAATATGAAATGCCCGGTTTAATGCAATTACGTCGTACCTATGGACCATCAAAACCATTACAAGGTGCACGTATTGCCGGATGTCTTCATATGACCGTTCAAACGGCTGTACTCATCGAAACTTTAACTGCTTTAGGAGCTGAAGTTCAATGGAGTAGTTGTAATATTTTCTCAACACAAGATCATGCCGCAGCTGCCATTGCTCAAGCTGGTATTCCAGTTTATGCTTGGAAAGGTGAAACCGATGAAGAATACATTTGGTGTATTGAACAAACTATCTTCTTCGGTAATGATAAAAAACCATTAAACATGATCTTAGATGATGGTGGTGATTTGACTGGTATTGTTCACGATAAATATCCAGAATTATGTGCTGGCATTTTCGGTATTAGTGAAGAAACAACAACAGGTGTTCATGCACTTTATAAAATGCTCAAACAAGATAAACTCAAAGTACCAGCTATTAATGTTAACGATTCAGTAACAAAATCGAAATTCGATAACTTATACGGTTGTCGTGAATCATTAATTGACGGTATTAAACGTGCAACT]

[+] EMBL CA755988             [ACTCCATACATTTTTATAACAAAAAGAACATTCAAAAATGTCCTCAGCTCCNACAAAAAAACAAACATTCAAAGTTGCTGATATCAGCTTAGCTGAATGGGGAAGAAAAGAAATCACATTAGCTGAATATGAAATGCCCGGTTTAATGCAATTACGTCGTACCTATGGACCATCAAAACCATTACAAGGTGCACGTATTGCCGGATGTCTTCATATGACCGTTCAAACGGCTGTACTCATCGAAACTTTAACTGCTTTAGGAGCTGAAGTTCAATGGAGTAGTTGTAATATTTTCTCAACACAAGATCATGCCGCAGCTGCCATTGCTCAAGCTGGTATTCCAGTTTATGCTTGGAAAGGTGAAACCGATGAAGAATACATTTGGTGTATTGAACAAACTATCTTCTTCGGTAATGATAAAAAACCATTAAACATGATCTTAGATGATGGTGGTGATTTGACTGGTATTGTTCACGATAAATATCCAGAATTATGTGCTGGCATTTTCGGTATTAGTGAAGAAACAACAACAGGTGTTCATGCACTTTATAAAATGCTCAAACAAGATAAACTCAAAGTACCAGCTATTAATGTTAACGATTCAGTAACAAAATCGAAATTCGATAACTTATACGGTTGTCGTGAATCATTAATTGACGGTATTAAACGTGCAACT]
[+] EMBL CA758762             [                                                                gCATTCAAAGTTGCTGATATCAGCTTAGCTGAATGGGGAAGAAAAGAAATCACATTAGCTGAATATGAAATGCCCGGTTTAATGCAATTACGTCGTACCTATGGACCATCAAAACCATTACAAGGTGCACGTATTGCCGGATGTCTTCATATGACCGTTCAAACGGCTGTACTCATCGAAACTTTAACTGCTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_12#0 ACTCCATACATTTTTATAACAAAAAGAACATTCAAAAATGTCCTCAGCTCCNACAAAAAA ACAAACATTCAAAGTTGCTGATATCAGCTTAGCTGAATGGGGAAGAAAAGAAATCACATT AGCTGAATATGAAATGCCCGGTTTAATGCAATTACGTCGTACCTATGGACCATCAAAACC ATTACAAGGTGCACGTATTGCCGGATGTCTTCATATGACCGTTCAAACGGCTGTACTCAT CGAAACTTTAACTGCTTTAGGAGCTGAAGTTCAATGGAGTAGTTGTAATATTTTCTCAAC ACAAGATCATGCCGCAGCTGCCATTGCTCAAGCTGGTATTCCAGTTTATGCTTGGAAAGG TGAAACCGATGAAGAATACATTTGGTGTATTGAACAAACTATCTTCTTCGGTAATGATAA AAAACCATTAAACATGATCTTAGATGATGGTGGTGATTTGACTGGTATTGTTCACGATAA ATATCCAGAATTATGTGCTGGCATTTTCGGTATTAGTGAAGAAACAACAACAGGTGTTCA TGCACTTTATAAAATGCTCAAACAAGATAAACTCAAAGTACCAGCTATTAATGTTAACGA TTCAGTAACAAAATCGAAATTCGATAACTTATACGGTTGTCGTGAATCATTAATTGACGG TATTAAACGTGCAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)