cluster # 1200

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Oryza sativa
cluster # 1200 cluster # 1200 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1200#0 length = 524 sequences # 2

consensusID : consensus_1200#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 524
fasta sequence

                              [GCGTCATGGGTGACCGTCACCGAAGGTCTGTCGACACGACGGCGACATCCTCAACCATCGGGCACATGCCAGTCGTTGATGCCTCGCATCATCTGCCTCAACCATCCTGGGCCAAGACGATAGCCACTC-GGACCTAAGGTAGCTCCAAGGTCAAGGCGCATTGCGGGGGATTGAACAGCTTGCACGCTGGACAGGCGAATCGGGGATTTCTTTTGTTATTTTGTGGAATTTCTAGCGTGCGGATACCCTCGTTCTGGAATTCAGACTGTACCATGCTATAGTGGTATTTTTTCTGGCCAAGCCGGCATAACAACGTATGTCAGTTGAAAAGCCTGTTCAATCATAAATTTGTGGAACAGAATTACCAGGATGGCTGACATGCCAATGATGGTGAAAGGGTCCATGTCATCCGGTCAAACCCCATGTGCTCTTATTCAATTAGCGTCGAACGTTTGTTTGGCTTTGATGGTCTAGTCTAGTCTAGTCTAGAAATGACACATCGCGTTCNCCTGAAAAAAAAAAAA]

[+] EMBL AT003706             [GCGTCATGGGTGACCGTCACCGAAGGTCTGTCGACACGACGGCGACATCCTCAACCATCGGGCACATGCCAGTCGTTGATGCCTCGCATCATCTGCCTCAACCATCCTGGGCCAAGACGATAGCCACTC GGACCTAAGGTAGCTCCAAGGTCAAGGCGCATTGCGGGGGATTGAACAGCTTGCACGCTGGACAGGCGAATCGGGGATTTCTTTTGTTATTTTGTGGAATTTCTAGCGTGCGGATACCCTCGTTCTGGAATTCAGACTGTACCATGCTATAGTGGTATTTTTTCTGGCCAAGCCGGCATAACAACGTATGTCAGTTGAAAAGCCTGTTCAATCATAAATTTGTGGAACAGAATTACCAGGATGGCTGACATGCCAATGATGGTGAAAGGGTCCATGTCATCCGGTCAAACCCCATGTGCTCTTATTCAATTAGCGTCGAACGTTTGTTTGGCTTTGATGGTCTAGTCTAGTCTAGTCTAGAAATGACACATCGCGTTCNCCTGAAAAAAAAAAAA]
[+] EMBL AT003612             [                                                                                                                    ACGATANCCNCTCGGGACCTAAGGTAGCTCCAAGGTCAAGGNGCATTGCGGGGGATTGAACAGCTTGCACGCTGGACAGGCGAATCGGGGATTTCTTTTGTTATTTTGTGGAATTTNTAGCGTGCGGATACCCTNGTTNTGGAATTCAGACTGTACCATGCTATAGTGGTATTTTTTCTGGCCAAGCCGGCATAACAACGTATGTCAGTTGAAAAGCCTGTTCAATCATAAATTTGTGGAACAGAATTACCAGGATGGCTGACATGCCAATGATGGTGAAAGGGTCCATGTCATCCGGTCAAACCCCATGTGCTCTTATTCAATTAGCGTCGANNGTTTGTTTGGCTTTNATGGTCTACNCTAGTCTAGTCTAGAAATGACACATCGCGTTCACCTGAAAAAAAAAAA ]




>consensus_1200#0
GCGTCATGGGTGACCGTCACCGAAGGTCTGTCGACACGACGGCGACATCCTCAACCATCG
GGCACATGCCAGTCGTTGATGCCTCGCATCATCTGCCTCAACCATCCTGGGCCAAGACGA
TAGCCACTCGGACCTAAGGTAGCTCCAAGGTCAAGGCGCATTGCGGGGGATTGAACAGCT
TGCACGCTGGACAGGCGAATCGGGGATTTCTTTTGTTATTTTGTGGAATTTCTAGCGTGC
GGATACCCTCGTTCTGGAATTCAGACTGTACCATGCTATAGTGGTATTTTTTCTGGCCAA
GCCGGCATAACAACGTATGTCAGTTGAAAAGCCTGTTCAATCATAAATTTGTGGAACAGA
ATTACCAGGATGGCTGACATGCCAATGATGGTGAAAGGGTCCATGTCATCCGGTCAAACC
CCATGTGCTCTTATTCAATTAGCGTCGAACGTTTGTTTGGCTTTGATGGTCTAGTCTAGT
CTAGTCTAGAAATGACACATCGCGTTCNCCTGAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case