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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1201 cluster # 1201       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1201#0 length = 1056 sequences # 2  

consensusID : consensus_1201#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1056
fasta sequence
                              [TTAAGTTGTTCAAGTTAAAAAGCTCTGTAGTTGGACATTGGCCGGTCCCAGTCCGGTCCAGCACTCACGGCGAGCACCGACCTGCTCGACCCTTCTCCGCGATGCGCTCCTGCCTTTAACTGCCAGGTTCGTGCACTCACGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCAGGTCACTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTC-TTAATCAAACCCACCTGTCAATGACTATATCTCTTCTCTTCCCTTCCTTTCCGCTTCATCAGATCGGTGCTACCTCATCTTTTGCCTTCCGCTCCACGTCGGGCCACCGTTGGGGAGAAGCGCGAACGTCAGGGGGAGTGGCGACGAGCCGGCCCATGGCAACGAGCTCGCCAGGTCAGCAACGGGCAAGACGACATACCGAAGACGGTTCAGCTTCGTCCTCCTCGACATCTCCATGCCCTAGCTTGCGCCTGCTGCATGTGCTTGAGTAGCGGGTATAGCGGTAGGGCACCGCGATCTCCTGGCTGCCGACGGCGGCCGGGTCGTTCCCCTCGACGACGACGACGCACACACATGAAGCCAGCGATGCACCCGGCGGTGGAGAACTGCACCGGGCCGAGGAACTTCCCTTCAGGCACCAAATGGCGTAGGGACGACGACAACGAGATGACAGCTTTCTCTTTTCTCTTTTATTTTTTATATGTCTTTATCTCAAGATCTGAGCTAATCAAGTTGTATTTTTTTTCCATTTAATTTTTAAGTATTTATCTTAGAATTTGAGCTAATCAAGTTATTTGAGTTAGCTTGATTATTTTGCTTCATGGCTTTTTTCTGATTGTGTGCCATTCTATACGAAACAAATTATGCCGAACATCCTACTTTCAATGGAAGTGTTATACTCCCTCCGT]

[+] EMBL BI795063             [TTAAGTTGTTCAAGTTAAAAAGCTCTGTAGTTGGACATTGGCCGGTCCCAGTCCGGTCCAGCACTCACGGCGAGCACCGACCTGCTCGACCCTTCTCCGCGATGCGCTCCTGCCTTTAACTGCCAGGTTCGTGCACTCACGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCAGGTCACTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTC TTAATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK110657             [                                                                                                                                                             GAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCC GGTC CTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATGGAGCCCACCTGTCAATGACTATATCTCTTCTCTTCCCTTCCTTTCCGCTTCATCAGATCGGTGCTACCTCATCTTTTGCCTTCCGCTCCACGTCGGGCCACCGTTGGGGAGAAGCGCGAACGTCAGGGGGAGTGGCGACGAGCCGGCCCATGGCAACGAGCTCGCCAGGTCAGCAACGGGCAAGACGACATACCGAAGACGGTTCAGCTTCGTCCTCCTCGACATCTCCATGCCCTAGCTTGCGCCTGCTGCATGTGCTTGAGTAGCGGGTATAGCGGTAGGGCACCGCGATCTCCTGGCTGCCGACGGCGGCCGGGTCGTTCCCCTCGACGACGACGACGCACACACATGAAGCCAGCGATGCACCCGGCGGTGGAGAACTGCACCGGGCCGAGGAACTTCCCTTCAGGCACCAAATGGCGTAGGGACGACGACAACGAGATGACAGCTTTCTCTTTTCTCTTTTATTTTTTATATGTCTTTATCTCAAGATCTGAGCTAATCAAGTTGTATTTTTTTTCCATTTAATTTTTAAGTATTTATCTTAGAATTTGAGCTAATCAAGTTATTTGAGTTAGCTTGATTATTTTGCTTCATGGCTTTTTTCTGATTGTGTGCCATTCTATACGAAACAAATTATGCCGAACATCCTACTTTCAATGGAAGTGTTATACTCCCTCCGT]


>consensus_1201#0 TTAAGTTGTTCAAGTTAAAAAGCTCTGTAGTTGGACATTGGCCGGTCCCAGTCCGGTCCA GCACTCACGGCGAGCACCGACCTGCTCGACCCTTCTCCGCGATGCGCTCCTGCCTTTAAC TGCCAGGTTCGTGCACTCACGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAG CCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCAGGTCACTATTGTGT TGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAG TCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGA TGTTTTCTTAATCAAACCCACCTGTCAATGACTATATCTCTTCTCTTCCCTTCCTTTCCG CTTCATCAGATCGGTGCTACCTCATCTTTTGCCTTCCGCTCCACGTCGGGCCACCGTTGG GGAGAAGCGCGAACGTCAGGGGGAGTGGCGACGAGCCGGCCCATGGCAACGAGCTCGCCA GGTCAGCAACGGGCAAGACGACATACCGAAGACGGTTCAGCTTCGTCCTCCTCGACATCT CCATGCCCTAGCTTGCGCCTGCTGCATGTGCTTGAGTAGCGGGTATAGCGGTAGGGCACC GCGATCTCCTGGCTGCCGACGGCGGCCGGGTCGTTCCCCTCGACGACGACGACGCACACA CATGAAGCCAGCGATGCACCCGGCGGTGGAGAACTGCACCGGGCCGAGGAACTTCCCTTC AGGCACCAAATGGCGTAGGGACGACGACAACGAGATGACAGCTTTCTCTTTTCTCTTTTA TTTTTTATATGTCTTTATCTCAAGATCTGAGCTAATCAAGTTGTATTTTTTTTCCATTTA ATTTTTAAGTATTTATCTTAGAATTTGAGCTAATCAAGTTATTTGAGTTAGCTTGATTAT TTTGCTTCATGGCTTTTTTCTGATTGTGTGCCATTCTATACGAAACAAATTATGCCGAAC ATCCTACTTTCAATGGAAGTGTTATACTCCCTCCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)