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Oryza sativa
cluster # 12017 cluster # 12017       Sequences # 10       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12017#0 length = 1132 sequences # 4  
consensus_12017#1 length = 552 sequences # 2  
consensus_12017#2 length = 485 sequences # 1  
consensus_12017#3 length = 353 sequences # 1  
consensus_12017#4 length = 320 sequences # 1  
consensus_12017#5 length = 279 sequences # 1  

consensusID : consensus_12017#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1132
fasta sequence
                              [GAATAAACCAAGATCTTACCATGACTGCAATTTTAGAGAGACGCGAAAGTACAAGCCTGTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAAAAACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAAGGCTTTTCTGTCAACAGCTAGCAATTACTGAACAAAANAAANAANNAAA]

[+] EMBL AU075861             [GAATAAACCAAGATCTTACCATGACTGCAATTTTAGAGAGACGCGAAAGTACAAGCCTGTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI799088             [                                                                                                                                                                                    tgGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCC ATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AU165140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAGGAAACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAAGGCTTTTCTGTCAACAGCTAGCAATTACTGAACAAA             ]
[+] EMBL AU075862             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAAT CTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGATAAGGCTTTTCTGCTAACATATNGCAATTTTTGAAAAAAANAAANAANNAAA]


>consensus_12017#0 GAATAAACCAAGATCTTACCATGACTGCAATTTTAGAGAGACGCGAAAGTACAAGCCTGT GGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCG GTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCG CTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACG GAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTT ACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGC TAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGA GTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTG CTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTT TAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTA TGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTA TGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTA ATGAGGGTTACAGATTTGGTCAAGAGGAAAAAACTTATAATATTGTGGCCGCTCATGGTT ATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCT TCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGG CTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTA TTAATACTTGGGCTGATATCATCAACCGTGCTAATCCTTGGTATGGAAGTAATGCACGAA CGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCCATCTCTTAATGGA TAAGGCTTTTCTGTCAACAGCTAGCAATTACTGAACAAAANAAANAANNAAA



consensusID : consensus_12017#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 552
fasta sequence
                              [AGCTACCTAGAGTCATCCATGGTCCTGAAGAGTTGCAGAGAGTAGAGATATATCTAAAGCTATATATGTACACTATTTTTGTACTAAGAGAGCAAGGCTTACATGGAGACAAGGGTTTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTGCTTGCATCTCTCCTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTATGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATAGTTTTCTTTTTTACTTTATTTTGGGCCTGATGAGAGGGGCAGCTAGCTAGCTCATCAAGTGGCGCTTAACTATGTTTATTCATGAAGAGATATGTTATAATGGTTTCTATTGGAAGTGGAAAAAACAAGGAA]

[+] EMBL CB683709             [AGCTACCTAGAGTCATCCATGGTCCTGAAGAGTTGCAGAGAGTAGAGATATATCTAAAGCTATATATGTACACTATTTTTGTACTAAGAGAGCAAGGCTTACATGGAGACAAGGGTTTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTGCTTGCATCTCTCCTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTATGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATAGTTTTCTTTTTTACTTTATTTTGGGCCTGATGAGAGGGGCAGCTAGCTAGCTCATCAAGTGGCGCTTAACTATGTTTATTCATGAAGAGATATGTTATAATGGTTTCTATTGGAAGTGGAAAAAACAAGGAA]
[+] EMBL CB683683             [AGCTAGCTAGAGTCATCCATGGTCCTGAAGAGTTGCAGAGAGTAGAGATATATCTAAAGCTATATATGTACACTATTTTTGTACTAAGAGAGCAAGGCTTACATGGAGACAAGGGTTTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTGCTTGCATCTCTCCTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTAGGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATAGTTTTCTTTTTTACTTTATTTTGGTCCTGATGAGAGGGGCAGCTAGCTAGCTCATCAAGTGGCGCTTAACTATGTTTATTCATGAAGAGATATGTTATAATGGTTTCTA                       ]


>consensus_12017#1 AGCTACCTAGAGTCATCCATGGTCCTGAAGAGTTGCAGAGAGTAGAGATATATCTAAAGC TATATATGTACACTATTTTTGTACTAAGAGAGCAAGGCTTACATGGAGACAAGGGTTTAG CTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTGCTTGCATCTCTCCTTCATCTG TATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTCGAG CGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATC CCTTATATTTATGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAAT GTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATA GTTTTCTTTTTTACTTTATTTTGGGCCTGATGAGAGGGGCAGCTAGCTAGCTCATCAAGT GGCGCTTAACTATGTTTATTCATGAAGAGATATGTTATAATGGTTTCTATTGGAAGTGGA AAAAACAAGGAA



consensusID : consensus_12017#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence
                              [CAGAAAAAACACAGAATTAATGCATGAGAAGAAGGGGGGGGGGGGAAAGTTAATTTCTGGAGATGGAAGAGAGCAAGGCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGATCGATATGTAATTAACTACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTATACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTACAGGGGAGCACTGCTGCAAAGTTATTCATAACAGTACATATATATATATGCCGTGTGGTATCTTTGCATTATAGGATTGACCTGATCTCACACTTAACTGCATATCATGTTATGTTTGCAACAGGT]

[+] EMBL CF316749             [CAGAAAAAACACAGAATTAATGCATGAGAAGAAGGGGGGGGGGGGAAAGTTAATTTCTGGAGATGGAAGAGAGCAAGGCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGATCGATATGTAATTAACTACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTATACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTACAGGGGAGCACTGCTGCAAAGTTATTCATAACAGTACATATATATATATGCCGTGTGGTATCTTTGCATTATAGGATTGACCTGATCTCACACTTAACTGCATATCATGTTATGTTTGCAACAGGT]


>consensus_12017#2 CAGAAAAAACACAGAATTAATGCATGAGAAGAAGGGGGGGGGGGGAAAGTTAATTTCTGG AGATGGAAGAGAGCAAGGCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGA CTTGCCTGTGTCCTTGTGTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGG CAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGA TCGATATGTAATTAACTACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCA GTTCTTTGCAAAATCTATACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTAC AGGGGAGCACTGCTGCAAAGTTATTCATAACAGTACATATATATATATGCCGTGTGGTAT CTTTGCATTATAGGATTGACCTGATCTCACACTTAACTGCATATCATGTTATGTTTGCAA CAGGT



consensusID : consensus_12017#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 353
fasta sequence
                              [GCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGATCGATATGTAATTAACTACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTATACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTACAGGGGAGCACTGCTGCAAAGTTATTCATAACAGTACATATATATATATGCNNNNNGTATCNNNGCNNTAT]

[+] EMBL CF196420             [GCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGATCGATATGTAATTAACTACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTATACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTACAGGGGAGCACTGCTGCAAAGTTATTCATAACAGTACATATATATATATGCNNNNNGTATCNNNGCNNTAT]


>consensus_12017#3 GCTTGCATGGTGATAAGGGTGTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGT GTAGAGGATCATTCAGAAAATGAGCCTTGAACTGGTTCATAGGCAGTCTCCTTGGCTAGT CTGAGTCGCTCTTATCACTCATGTTAGGCTTGCATCTCGTTGATCGATATGTAATTAACT ACGTTTTCTTCAGAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTA TACATGCAGAGATACAGTTTGATCATCTTCAGGTTACAGTTACAGGGGAGCACTGCTGCA AAGTTATTCATAACAGTACATATATATATATGCNNNNNGTATCNNNGCNNTAT



consensusID : consensus_12017#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 320
fasta sequence
                              [CTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTACAGGTGATAATTAATCAAATTAATGATATCATATATATGCAGATTATATTATTTAATATGCAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTAGGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATANNNTT]

[+] EMBL CF196394             [CTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATTAAGGTACAGGTGATAATTAATCAAATTAATGATATCATATATATGCAGATTATATTATTTAATATGCAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTAGGAATTAATGGATGTAGTATTTTGGATCCATCATCCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTATACGATACATATATANNNTT]


>consensus_12017#4 CTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTGGTGCGGCTAATT AAGGTACAGGTGATAATTAATCAAATTAATGATATCATATATATGCAGATTATATTATTT AATATGCAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTCTTTCTACCCATCACA TAGGCAGAATTAATCCCTTATATTTAGGAATTAATGGATGTAGTATTTTGGATCCATCAT CCATGATGATCCAATGTAAATATGTAATCATATATATGTGTGTATGTGTATGTATCTCTA TACGATACATATATANNNTT



consensusID : consensus_12017#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence
                              [GCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTGCAACATGGGCAGTCTCCTTGGATAGCCTGAGTGATTCTTGTCACTTATGCTAGGCTTGCATCTCTCCTTCATCTGTATGTATGCCGATCTGTTATGAAGAATC]

[-] EMBL CF310102             [GCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTGCAACATGGGCAGTCTCCTTGGATAGCCTGAGTGATTCTTGTCACTTATGCTAGGCTTGCATCTCTCCTTCATCTGTATGTATGCCGATCTGTTATGAAGAATC]


>consensus_12017#5 GCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCC TTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTG GGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTGCAAC ATGGGCAGTCTCCTTGGATAGCCTGAGTGATTCTTGTCACTTATGCTAGGCTTGCATCTC TCCTTCATCTGTATGTATGCCGATCTGTTATGAAGAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12017#0      GAATAAACCAAGATCTTACCATGACTGCAATTTTAGAGAGACGCGAAAGTACAAGCCTGT 60
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      GGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCG 120
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      GTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCG 180
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      CTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACG 240
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      -----------CAGAAAAAACACAGAATTAATGCATGAGAAGAAGGGGGGGGGGGGAAAG 49
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------AGCTACCTAGAGTCATCCATGGTCCTGAAGAGTTGCAGAGAG 42
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      GAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTT 300
consensus_12017#5      ----------------------------------------------------GCACTTTT 8
consensus_12017#2      TTAATTTCTGGAGATGGAAGAGAGCAAGGCTTGCATG-GTGATAAGGGTGTAGCTCTGGT 108
consensus_12017#3      ----------------------------GCTTGCATG-GTGATAAGGGTGTAGCTCTGGT 31
consensus_12017#1      TAGAGATATATCTAAAGCTATATATGTACACTATTTTTGTACTAAGAGAGCAAGGCTTAC 102
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      ACCCAATTTGGGA---AGCTGCATCTGTTGATGAGTGGTTATACA-AT-GGTG-GTCCTT 354
consensus_12017#5      ACCCAATTTGGGA---AGCTGCATCTGTTGATGAGTGGTTATACA-AT-GGTG-GTCCTT 62
consensus_12017#2      AGCCAAGGATGACTT-GCCTGTGTCCTTGTGTAGAGGATCATTCAGAA-AATG-AGCCT- 164
consensus_12017#3      AGCCAAGGATGACTT-GCCTGTGTCCTTGTGTAGAGGATCATTCAGAA-AATG-AGCCT- 87
consensus_12017#1      ATGGAGACAAGGGTTTAGCTCTGGTAGCCAAGGATGACTTGCCTGTGTCCTTGTGTGCTT 162
consensus_12017#4      ------------CTTCATCTGTATCTATGCCGATCTGTTCTGAAGAATCAATGCATGCTG 48
                                         **                  *            **    ** 

consensus_12017#0      ATG-AGCTAATTGTTCTACA--CTTCTTACTTGGTGTAGCTTGTTAT-ATGGGTCGTGAG 410
consensus_12017#5      ATG-AGCTAATTGTTCTACA--CTTCTTACTTGGTGTAGCTTGTTAT-ATGGGTCGTGAG 118
consensus_12017#2      -TG-AACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATG-- 220
consensus_12017#3      -TG-AACTGGTTCATAGGCAGTCTCCTTGGCTAGTCTGAGTCGCTCTTATCACTCATG-- 143
consensus_12017#1      GCATCTCTCCTTCATCTGTA--TCTAT--GCCGATCTGTTCTGAAGA-ATCA-ATGCATG 216
consensus_12017#4      GTGCGGCTAATTAAGGTACA--GGTGATAATTAATCAAATTAATGAT-ATCATATATATG 105
                             **  **       *              *             **          

consensus_12017#0      TGGGAACTGAGTTTCCGTCT---GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 467
consensus_12017#5      TGGGAACTGAGTTTCCGTCT---GGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 175
consensus_12017#2      ------TTAGGCTTGCATCT---CGTTGATCGATATGTAATTA--ACTACGTTTTCTTCA 269
consensus_12017#3      ------TTAGGCTTGCATCT---CGTTGATCGATATGTAATTA--ACTACGTTTTCTTCA 192
consensus_12017#1      CTGGTGCGGCTAATTAA------GGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTC 270
consensus_12017#4      CAGATTATATTATTTAATATGCAGGTCGAGCGATCTTGTGTTGTACTTTGATGCTGCTTC 165
                                    *          *     **   *    **     *   *  *     

consensus_12017#0      CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCT 527
consensus_12017#5      ---------GCAACATGGGCAGTCTCCTTGGATAGCCTGAGTGATTCT-----TGTCACT 221
consensus_12017#2      GAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTA-----TACATGC 324
consensus_12017#3      GAAGGAAAAGTAATTCTTGATGCATTTATCAGTTCTTTGCAAAATCTA-----TACATGC 247
consensus_12017#1      TTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTATGAATTAA----TGGATGT 326
consensus_12017#4      TTTCTACCCATCACATAGGCAGAATTAATCCCTTATATTTAGGAATTAA----TGGATGT 221
                                         *  *  *   *   *                    *      

consensus_12017#0      GATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAG 587
consensus_12017#5      TATGCTAGGCTT----GCATCTCTCCTTCATCTGTATGTATGCCGATCTGTTATGAAGAA 277
consensus_12017#2      AGAGATACAGTTT---GATCATCTTCAGGTTACAGTTACAGGGGAGCACTGC-TGCAAAG 380
consensus_12017#3      AGAGATACAGTTT---GATCATCTTCAGGTTACAGTTACAGGGGAGCACTGC-TGCAAAG 303
consensus_12017#1      AGTATTTTGGATC---CATCATCCATGATGATCCAATGTAAATATGTAAT-CATATATAT 382
consensus_12017#4      AGTATTTTGGATC---CATCATCCATGATGATCCAATGTAAATATGTAAT-CATATATAT 277
                            *     *         **             *  *                * * 

consensus_12017#0      CATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCC 647
consensus_12017#5      TC---------------------------------------------------------- 279
consensus_12017#2      TTATTCATAACAGTACATATATAT-ATATGCCGTGTGGTATCTTTGCATTATAGGATT-- 437
consensus_12017#3      TTATTCATAACAGTACATATATAT-ATATGCNNNNNG-TATCNNNGCNNTAT-------- 353
consensus_12017#1      GTGTGTATGTGTATGTATCTCTATACGATACATATATAGTTTTCTTTTTTACTTTATTTT 442
consensus_12017#4      GTGTGTATGTGTATGTATCTCTATACGATACATATATANNNTT----------------- 320
                                                                                   

consensus_12017#0      CTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAA 707
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      -GACCTGATCTCACACTTAACTGCATATCATGTTATGTTTGCAACAGGT----------- 485
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      GGGCCTGATGAGAGGGGCAGCTAGCTAGCTCATCAAGTGGCGCTTAACTATGTTTATTCA 502
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      AACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAAAAACTTATAATATTGTG 767
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      TGAAGAGATATGTTATAATGGTTTCTATTGGAAGTGGAAAAAACAAGGAA---------- 552
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      GCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGT 827
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      TCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGT 887
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      ATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGC 947
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      CAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCCTTGGTATGGA 1007
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      AGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAAGTTCC 1067
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      ATCTCTTAATGGATAAGGCTTTTCTGTCAACAGCTAGCAATTACTGAACAAAANAAANAA 1127
consensus_12017#5      ------------------------------------------------------------
consensus_12017#2      ------------------------------------------------------------
consensus_12017#3      ------------------------------------------------------------
consensus_12017#1      ------------------------------------------------------------
consensus_12017#4      ------------------------------------------------------------
                                                                                   

consensus_12017#0      NNAAA 1132
consensus_12017#5      -----
consensus_12017#2      -----
consensus_12017#3      -----
consensus_12017#1      -----
consensus_12017#4      -----
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)