These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2369 fasta sequence [GAGCCAACCCCGCCCCGCGCCGCCCCGCCGCGGCCGCGTCGTCTCCTCCGCCACCTCCACGTCTAGGGTTCCCCTCCGCCGTCAGCATTGCCCGCCGGAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGATTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCTGCCCTCCCAGTCATAGCCTTCGGAACGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCATAGTTCACCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGAGGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAGGGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCGCAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGTTCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC] [+] EMBL AK072421 [GAGCCAACCCCGCCCCGCGCCGCCCCGCCGCGGCCGCGTCGTCTCCTCCGCCACCTCCACGTCTAGGGTTCCCCTCCGCCGTCAGCATTGCCCGCCGGAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGATTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCTGCCCTCCCAGTCATAGCCTTCGGAACGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCATAGTTCACCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGAGGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAGGGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCGCAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACT ] [+] EMBL AU225333 [ gccgctGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGTGATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTGCCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCTTGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAGTCAG ] [-] EMBL AU225787 [ ccgctCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCATACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGATATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGTTCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC] consensusID : consensus_12019#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 886 fasta sequence [AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTACCTGGCAACCAGTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAGGCTGTGTT] [-] EMBL CB624018 [AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTACCTGGCAACCAGTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAGGCTGTGTT] [-] EMBL CB622274 [ TCTTTCATGGAATCAGTGCCTTCAAAAACAATTATTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTGTATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGCCGTATGATATGACATGCTTGTCAGTTGCCACATTGTGCATGGAAAGCAACTAGATTACTGAAGGTCTGAAGGTAGTAGATTTCAATGTTCTCTATGCCTGTGAATTGTTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGGAATATAG ] consensusID : consensus_12019#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 848 fasta sequence [CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTGTATTATATACATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGCCGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAAAGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTCTAGCCTGTGAATTGTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGAAATATAGATGGGAAAAAAA] [+] EMBL CF294761 [CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTACAAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATTACGTGGATACCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAAGCTGTGGCAGCCGTGACGACGCTGAGATATTTGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTGTATTATATACATAATACATTCATACTTTCATATACA ] [-] EMBL CF294762 [ CAACTAACCGTGGAGAGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACGCCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTTATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGCCCGTTGTATTATATACATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGCCGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAAAGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTCTAGCCTGTGAATTGTTGCTCCTAGATTGTTCTGTTTGATTGTAAAATTGCATGGCAATCAATATGAAATATAGATGGGAAAAAAA] consensusID : consensus_12019#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 783 fasta sequence [CCGCCACCACCCTCTAACTCTAGGGTTTCGCTCCCGCGCCGACGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT-TTGCTCGACGACTGA-TCTTCTGCT-TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTAT] [+] EMBL CB624017 [CCGCCACCACCCTCTAACTCTAGGGTTTCGCTCCCGCGCCGTCGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT TTGCTCGACGACTGA TCTTCTGCT TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTAT] [+] EMBL CB621206 [ GCCACCACCCTCTAACTCTAGGGTTTCACTCCCGCGCCGACGAGCGGCCAGTATTGCCGCCGCCGCCGCGGTCGCCGCAACCCCGCGCGCCATCGATGTTGCTCGACGACTGAGTCTTCTGATATAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAACGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGCACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCACAACTGAGCACAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGATGATAATTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAAGCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGGAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGATCCTGCGACAAGCCATTA ] [+] EMBL CB622273 [ CCGCCTCGAAGAGCGGCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT TTGCTCGACGACTGA TCTTCTGCT TAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGACTCCCTTTAAGGGAGTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACAAGCATGACTGGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATATCTTCTTTGCCTCTGCCCTCCCAGTCATCGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATACATTCAATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTGGCAATGTTCAATGCTTCTAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAAGGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCATAGTTCACCTATATATCAATTCCAGTGGCTGTATGTCAACGGCCTGCTTGGTGTTATCTTTT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12019#0 ------------------------------------------------------------ consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 AAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCTTATATGGCTATTGACAGTCTA 60 consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 ---------------------GAGCCAACCCC-GCCCCGCGCCG-CCCCGCCGCGGCCGC 37 consensus_12019#3 -----------CCGCCACCACCCTCTAACTCTAGGGTTTCGCTC-CCGCGCCGACGAGCG 48 consensus_12019#1 CCTGGCAACCAGTTT-GGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTAC 119 consensus_12019#2 --------CCAGTTTTGGGAAAGGTTAAGACTTATATTCATCCCATCAAGCCGACGCTAC 52 ** * * * **** * consensus_12019#0 GTCGTCTCCTCCGCCACCTCCACGTCTAGGGT--TCCCCTCCGCCGTCAGCATTGCCCGC 95 consensus_12019#3 GCCAGCATTGCCGCCGCCGCCGCGGCCGCCGCAACCCCGCGCGCCATCGAT-TTGCTCGA 107 consensus_12019#1 AAGGTTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCA-GTGCCTTCAAAAACAATTAT 178 consensus_12019#2 AAGGGTCTTGAGGGTCCCCATGCCTCTTTCATGGAATCA-GTGCCTTCAAAAACAATTAC 111 * ** * * * *** ** consensus_12019#0 CG-------GAGCTTCTGGTTAGTATTGAGTGGAATTCAGCTGATGGAACTACTAAAGAT 148 consensus_12019#3 CGACT----GATCTTCTGCTTAGTCTCGAGCTGAGTACAGCTGATGGATCTACTAAGGAC 163 consensus_12019#1 TGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTT--CGGCATTACGTGGATA 236 consensus_12019#2 TGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTT--CGGCATTACGTGGATA 169 * ** **** ** ** * * * ** *** consensus_12019#0 TCCCTTTAAGGGT----GTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACA-AGCAT 203 consensus_12019#3 TCCCTTTAAGGGA----GTCGTCGCTGATATCGAAGGCCGAGTAGCTTGGTACA-AGCAT 218 consensus_12019#1 CCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCAT 296 consensus_12019#2 CCAATAGCAGGGATCCTGTTCCCGCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCAT 229 * * **** ** ***** ** * *** * ***** consensus_12019#0 GATT-----GGCTTGAGGGATTCCACTCTGGCTTCAGGATATTGGCACCTACTATGTATA 258 consensus_12019#3 GACT-----GGGTTGCTGGATTCCGCTCTGGCTTCAGGATATTGGCACCTACCATGTATA 273 consensus_12019#1 GTCCTCCCAAAGTTTTTTGAGCCAAAT--GACCTTCGGGAATTGGACGCAGCTGAGTATG 354 consensus_12019#2 GTCCTCCCAAAGTTTTTTGAGCCAAAT--GACCTTCGGGAATTGGACGCAGCTGAGTATG 287 * ** ** * * * * * ** ***** * * **** consensus_12019#0 TATTTTTTGCCTCTGCCCTCC-CAGTCAT-AGCCTTCGGA--ACGCAACTGAGCAGAGAA 314 consensus_12019#3 TCTTCTTTGCCTCTGCCCTCC-CAGTCAT-CGCCTTCGGA--GCGCAACTGAGCAGAGAA 329 consensus_12019#1 AAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAA 414 consensus_12019#2 AAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGAATCTGATTCAGGAA 347 *** ** ** ** * *** ** *** * * **** *** consensus_12019#0 ACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATC 374 consensus_12019#3 ACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCATTATGTGGCATCATA 389 consensus_12019#1 GCTG-TGGCAGCCGTGACGACGCTGAGATATTTG-ATGAGCTG-ACAACTAACCGTGGAG 471 consensus_12019#2 GCTG-TGGCAGCCGTGACGACGCTGAGATATTTG-ATGAGCTG-ACAACTAACCGTGGAG 404 * *** * * * * ** * * * * ** *** * * * * consensus_12019#0 CATTCCATTCTTGGAGGGC-AGCCTCTGTTGATAGTTGGAGTTGCAGAGCCA-------- 425 consensus_12019#3 CATTCAATTCTTGGAGGGC-AGCCTCTGTTGATAGTTGGAGTTGCAGAGCCA-------- 440 consensus_12019#1 AGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACG 531 consensus_12019#2 AGCTAAAGCACAGAACTTCCAGCCACCGTGAAGAAAGGCACCTGCAGGTGCATTCAAACG 464 * * * * * **** * ** * * * * ***** ** consensus_12019#0 --ACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGG 483 consensus_12019#3 --ACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGG 498 consensus_12019#1 CCATTCAACCCAGGTGTGGAGATACTGAAAACTGGTCCGAGTGCTAATGAATTTCTGCTT 591 consensus_12019#2 CCATTCAACCCAGGTGTGGAGATACTGAAAACTTGTCCGAGTGCTAATGAATTTCTGCTT 524 * * * ** ** ** * **** ** ** * * * * * consensus_12019#0 AA-----CGACTGTATTTAGCATGGGC-TGGATGGGTCTGCATC---TGGACTGCGATCA 534 consensus_12019#3 AA-----CGACTGTATTTAGCATGGGC-TGGATGGGTCTGCATC---TGGACTGCGATCA 549 consensus_12019#1 ATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTAATGCAGCGGTCCGTTG 651 consensus_12019#2 ATTCTGTCGGATGAGTATATTATAGGCGTATATAGCACTTCCTCAAGCAGCGGGCCGTTG 584 * ** ** * ** ** *** * ** * ** * * * * * consensus_12019#0 TGTTGTTTCTTCTGGCAATGTTCAATGCTTCTA-ATGTTAT-TAGCAGGTTTACAAGGGT 592 consensus_12019#3 TGTTGTTTCTTCTGGCAATGTTCAATGCTTCTA-ATGTTAT-TAGCAGGTTTACAAGGGT 607 consensus_12019#1 TATTATATACTGTAGTACATTGCTACTTTCCTATACATCATACTGTAGCTGTAGATCGGC 711 consensus_12019#2 TATTATATAC-ATAATACATTCATACTTTCATATACATCGTACTGTAGCTGGAGATCGGC 643 * ** * * * * * * * ** * * * * ** * * * ** consensus_12019#0 TGCAGGAGA--ACTTTTCGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAA 650 consensus_12019#3 TGCAGGAGA--ACTTTTTGGGATGTTGATTACTGTTCTGTTCCTGCAACAAGCCATTAAA 665 consensus_12019#1 CGTATGATATGACATGCTTGTCAGTTGCCA--------CATTGTGCATG--------GAA 755 consensus_12019#2 CGTACGATATGACATGCTTGTACGTTGTCAACATGTCACATTGTGCATGCAGTAAACAAA 703 * * ** * ** * * **** * **** ** consensus_12019#0 GGAATTATAGAAGAATTCAAGGTACCTGGAGGTGTCGACCAT--AGTTCACCTATATATC 708 consensus_12019#3 GGAATTATAGAAGAATTCAAGGTGCCTAGAGATGCAGACCAT--AGTTCACCTATATATC 723 consensus_12019#1 AGCAACTAGATT--ACTGAAGGTCTG-AAGGTAGT---------AGATTTCAATGTTCTC 803 consensus_12019#2 AGCAACTGGATTTTACTGAAGGTCTGTAAGGCTGTGTGACATGTAGATTTCAATGTTCTC 763 * * * * ***** * * ** * * * ** consensus_12019#0 GATTCCAGTGG-TTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTA 767 consensus_12019#3 AATTCCAGTGG-CTGTATGTCAACGGCCTGCTTGGTGNTATCTTTTCAATTGGGCTGTTA 782 consensus_12019#1 TATGCCTGTGAATTGTTTGCTCCTAGATTGTTGTGTTTGAT-TGTAAAATTGCATGGCAA 862 consensus_12019#2 TA-GCCTGTGAATTGTT-GCTCCTAGATTGTTCTGTTTGAT-TGTAAAATTGCATGGCAA 820 * ** *** *** * * * * ** ** * * ***** * * consensus_12019#0 TACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGA 827 consensus_12019#3 T----------------------------------------------------------- 783 consensus_12019#1 TCAATATGGAATATAGGCTGTGTT------------------------------------ 886 consensus_12019#2 TCAATATGAAATATAGATGGGAAAAAAA-------------------------------- 848 * consensus_12019#0 GGCTTCATTTCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTAC 887 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGG 947 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GAGTCAAGTTCACTGCATCACTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCA 1007 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TACATATTTGCTGCCATTCTGCCAGCTTTGATGATTGCAGGACTTTACTTCTTTGATCAT 1067 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 AGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTAC 1127 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 CATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCT 1187 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 CCATCTAATGGAGTACTTCCTCAGTCCCCGATGCATACAAGAAGCCTTGCTGTCCTTAAG 1247 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCAACGAAGGCCTGATGAATCGTGCT 1307 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 AGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAA 1367 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 AATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCAAGAAGGT 1427 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GATAAAGAAGGGACATTGGCTGAAGAATTTGACCCTATAAAACATATTGAAGCACATTTG 1487 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 CCTGTTCGAGTGAATGAGCAGAGACTAAGTAACTTGCTGCAATCCTTATTAGTTGGTGCT 1547 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TGTGTTGGAGCTATGCCAGTCATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTT 1607 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GCTTATATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGAATAAGACTTATA 1667 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TTCATCCCATCAAGCCGACGCTACAAGGTTTTGGAGGGTCCCCATGCGTCTTTCATGGAG 1727 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATA 1787 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCGTTGCCATTCTTCCTT 1847 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 ATGATTCTTATCAGGCAGCATGTCCTCCCAAAGTTTTTTGAGCCAAATGACCTTCGGGAA 1907 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TTGGATGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGAT 1967 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 GGTGCATCTGATTCAGAAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTG 2027 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 ACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAACCACCGTGAAGAAAGGCACCCG 2087 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 CAGGCGCATACAAAAGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGC 2147 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TAAAGAATTTCGGCTTACTGTCGGATGGGTATACGATAGGCATATATAGCACTTCCTCAT 2207 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 ACATTCCTACTTTCCTATACATCGCACTGTAGCAGGAGATCGGCGGCCGTATGATATGAT 2267 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 ATGCTTGTCAGTTGTCACATTGTGCATGGAGTAAACAGAAGCAACTGGATTTTACGATGT 2327 consensus_12019#3 ------------------------------------------------------------ consensus_12019#1 ------------------------------------------------------------ consensus_12019#2 ------------------------------------------------------------ consensus_12019#0 TCTCTAGCCTGTGAAATGTTGCTCCTTGAAAAAAAAAGCGGC 2369 consensus_12019#3 ------------------------------------------ consensus_12019#1 ------------------------------------------ consensus_12019#2 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||