|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12047#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1976 fasta sequence
[TGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCTTCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAGGCATGAACTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGGGGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATATGCATGGCTGGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAATTTGAAAATGCTCCTTCTTATTCAGAAAAGAACTGGGGTGCAGGTTTTCCGAGGAAGTGGTATTGGGTCCAGTGCAATGTCTTCTCAGGCGCATCTGGTGAAGTTGCATTAACGGCTGCTGGCGGATTAAGGAAAATTGGATTGGGCGAAACCTATGAAAGTCCTTCACTGATTGGAATTCATTATGAGGGAAAATTCTATGAATTTGTGCCTTGGACCGGGACAGTGAGCTGGGACATTGCCCCTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAACCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATC-TGAGGCTGCAAATGT-GGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATT-TCTCAAGCCCCCTGGT-CTGTAGCATT-GTT-CAGGTCGAGCCAT-CGATAGGTAGAGATGAATAGGCCCTCCAAT-CT-T-GT-CACACCTTGAGTCTT-GAT-CT-GTT-CCT-CACT-TAGCAT-CAT-GTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCATCTTAGGCAGTTCCATCCTTTTGTGCTCATCTGAACTTCTGAAGTATCATAAAGAAGTGATAGCTGGATGCCCGGGCCTGCATCTGCAATTGTGGAGGTCTTTCTGGTCAGAATTGGCTGGAAACAATTGTTGTTAGCACACTTCATATGGTAAATCTTTCAGAGGTACTGACAGACAAAGACGTGTGTTTTCAATTATCATTGTACTAACAAGGATACCAGTGGGCCTAACAGCACATGACGGAAGTTCTAGCCTGTTGGCATAACATTGGATTATAGTATTACAAAGCTGAT]
[+] EMBL AK072052 [TGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCTTCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAGGCATGAACTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGGGGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATATGCATGGCTGGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAATTTGAAAATGCTCCTTCTTATTCAGAAAAGAACTGGGGTGCAGGTTTTCCGAGGAAGTGGTATTGGGTCCAGTGCAATGTCTTCTCAGGCGCATCTGGTGAAGTTGCATTAACGGCTGCTGGCGGATTAAGGAAAATTGGATTGGGCGAAACCTATGAAAGTCCTTCACTGATTGGAATTCATTATGAGGGAAAATTCTATGAATTTGTGCCTTGGACCGGGACAGTGAGCTGGGACATTGCCCCTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAACCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATC TGAGGCTGCAAATGT GGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATT TCTCAAGCCCCCTGGT CTGTAGCATT GTT CAGGTCGAGCCAT CGATAGGTAGAGATGAATAGGCCCTCCAAT CT T GT CACACCTTGAGTCTT GAT CT GTT CCT CACT TAGCAT CAT GTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCATCTTAGGCAGTTCCATCCTTTTGTGCTCATCTGAACTTCTGAAGTATCATAAAGAAGTGATAGCTGGATGCCCGGGCCTGCATCTGCAATTGTGGAGGTCTTTCTGGTCAGAATTGGCTGGAAACAATTGTTGTTAGCACACTTCATATGGTAAATCTTTCAGAGGTACTGACAGACAAAGACGTGTGTTTTCAATTATCATTGTACTAACAAGGATACCAGTGGGCCTAACAGCACATGACGGAAGTTCTAGCCTGTTGGCATAACATTGGATTATAGTATTACAAAGCTGAT]
[+] EMBL CB621955 [ TCCCTCTTAAGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTCGGCGCCGATGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAGGCATGAACTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGGGGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATATGCATGGCTGGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAAT ]
[+] EMBL CB655354 [ TCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAGGCATGAACTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGGGGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATATGCATGGCTGGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAATTTGAA ]
[-] EMBL CB685276 [ ACTGATTGGAATTCATTATGAGGGAAAATTCTATGAATTTGTGCCTTGGACCGGGACAGTGAGCTGGGACATTGCCCCTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAACCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATC TGAGGCTGCAAATGT GGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATT TCTCAAGCCCCCTGGT CTGTAGCATT GTT CAGGTCGAGCCAT CGATAGGTAGAGATGAATAGGCCCTCCAAT CT T GT CACACCTTGAGTCTT GAT CT GTT CCT CACT TAGCAT CAT GTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAA ]
[-] EMBL CB655355 [ CCCTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAACCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATC TGAGGCTGCAAATGT GGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATT TCTCAAGCCCCCTGGT CTGTAGCATT GTT CAGGTCGAGCCAT CGATAGGTAGAGATGAATAGGCCCTCCAAT CT T GT CACCCCTTGAGTCTT GAT CT GTT CCT CACT TAGCAT CAT GTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCTTAAGAGGCAGTTCCATCCTTT ]
[+] EMBL BQ907905 [ TGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAGCATGCAAAGACACCTGCTATGGTGATCTTGAGGCTGCAAATGTGGGGAAAAGAGAAATGATGGTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACAT GCGGCACTAGAAGTTGGTGGAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTGTCTCAAGCCCCTGGGTGCTGTAGCATTGGTTGCAGGTCGAGCCATGCGATAGGTAGAGATGAATAGGCCCTCCAATGCTGTGGTGCACACCTTGAGTCTTGGATGCTGGTTGCCTGCACTGTAGCATGCATGGTTTTCAGCCAGAGAACTACAGAAACAGGAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGC CCTTTCGGGTGAAATCATG TGCACAAATTTTTACTGATCAGGAATGGAT CTGTAATTCAAGAAAATAAGTATAATTCATCTTAGCCAGTTCaaaaa ]
consensusID : consensus_12047#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[AGCTCCTGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCTTCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGA-TAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTT]
[+] EMBL CB685275 [AGCTCCTGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCTTCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCGCTCCGCGCGCGGCCTCCTCCTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTACGCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGCACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAGAGCTTCTGCTTCATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAGATTCTTGGCGCCGATGA TAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTT]
[+] EMBL OSR15892A [ CATGTACTCTGTCGAGAACCCGTTGTTCCGAGATGGGATGAGTGATCTGGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTC GCGCGCAGATTCTTGGCGNCGATGACNAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTNACACCGATTTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAACAGCTAGGTGGGAGTACAGCACTCGACCAGTATATGGCTGGGGTGATGTCACGTCAAAGCAGAAATCAACTNCTGGTTGGCTTa ]
consensusID : consensus_12047#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 664 fasta sequence
[GTGAGCTGGGACATTNCCCCTTGGGNTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATCGAAGCANCCACAAAAGACCCAGGCACTGCTTTCCGAGCTCCAACCATGGAGNCTGGACTAGTCCCAGCANGCAAAGACACCTGCTATGGTGATCTGAGGCTGCAAATGTGGGAAAAGAGAANTGATGGTGGCAAGGGAAAGATGATNCTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGNCCCTTGGTTCAATGGTTGGAAAGGCACGACTG-TTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTGGTCTGTAGCATTGTTCAGGTCGAGCCATCGATAGGTAGAGATGAATAGGCCCTCCAATCTTGTCACACCTTGAGTCTTGATCTGTTCCTCACTTAGCATCATGTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCATCTTAGGCAGTTCCATCCAAAAAAAAAA]
[+] EMBL AU031770 [GTGAGCTGGGACATTNCCCCTTGGGNTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATCGAAGCANCCACAAAAGACCCAGGCACTGCTTTCCGAGCTCCAACCATGGAGNCTGGACTAGTCCCAGCANGCAAAGACACCTGCTATGGTGATCTGAGGCTGCAAATGTGGGAAAAGAGAANTGATGGTGGCAAGGGAAAGATGATNCTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTGGAGNCCCTTGGTTCAATGGTTGGAAAGGCACGACTG TTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTGGTCTGTAGCATTGTTCAGGTCGAGCCATCGATAGGTAGAGATGAATAGGCCCTCCAATCTTGTCACACCTTGAGTCTTGATCTGTTCCTCACTTAGCATCATGTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCATCTTAGGCAGTTCCATCCAAAAAAAAAA]
[+] EMBL BQ908729 [ CTGTTTTCAAACGAGATTGTGAACAACGTTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTGGTCTGTAGCATTGTTCAGGTCGAGCCATCGATAGGTAGAGATGAATAGGCCCTCCAATCTTGTCACACCTTGAGTCTTGATCTGTTCCTCACTTAGCATCATGTTTTCAGCCAGAGAACTACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCTTTCGGGTGAAATCATGTTGCACAAATTTTTACTGATCAGGAATGGATGCTGTAATTCAAGAAAATAAGTATAATTCATCTTAGGCAGTTCAA AAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12047#0 ------TGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCT 54
consensus_12047#1 AGCTCCTGCCCGCCCGCAGCATCAGCATGGACCTCGCCGCCGCCGCCGTGGCCGTCTCCT 60
consensus_12047#2 -------GTGAGCTGGGACATTNCCCCTTGGGNTCACTGGAAGTTGTCCGGCGAGAACAA 53
* ** * * * * * * ** * * *** *
consensus_12047#0 TCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCG 114
consensus_12047#1 TCCCACGCCCTGCTCCCCCGCCGCGCCGCTGCGCCCCACGCCGCCACCGCCGCGCCCTCG 120
consensus_12047#2 AA--ATCATCTGGTTGAAATCGAAGCANCCACAAAAGACCCAGGCACTGCTTT--CCGAG 109
* *** * * ** * * ** * * *** ** ** *
consensus_12047#0 CTCCGCGCGCGGCCTCCTC-CTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTAC 173
consensus_12047#1 CTCCGCGCGCGGCCTCCTC-CTCCCCCTCCCCCTCCACGGCGGTGGCGGCGCCCGTCTAC 179
consensus_12047#2 CTCCAACCATGGAGNCTGGACTAGTCCCAGCANGCAAAGACACCTGCTATGGTGATCTGA 169
**** * ** * ** ** * * * * * ** * ***
consensus_12047#0 GCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGC 233
consensus_12047#1 GCCCCCACGCCGCGGGACCGGGCCCTGCGGACGCCGCACAGCGGGTATCACTATGACGGC 239
consensus_12047#2 GGCTGCAAATGTGGGAAAAGAGAANTGATGGTGGCAAGGGAAAGATGATNCT-CGACGCA 228
* * ** ** * * * ** * * * * * ** ****
consensus_12047#0 ACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAG 293
consensus_12047#1 ACGGCGAGGCCCTTCTTTGAGGGATGGTACTTCAAGGTGTCCATTCCCGAGTGCAGGCAG 299
consensus_12047#2 ACAA-GCAACATGGCGGCACTAGAAGTTGGTGGAGNCCCTTGGTTCAATGGTTGGAAAGG 287
** * * * ** * * * * * *** ** *
consensus_12047#0 AGCTTCTGCTTCATGTACTCTGTCGAGAACC-CGTTGTTCCGAGATGGGATGAGTGATCT 352
consensus_12047#1 AGCTTCTGCTTCATGTACTCTGTCGAGAACC-CGTTGTTCCGAGATGGGATGAGTGATCT 358
consensus_12047#2 CACGACTGTTTCAA--ACGAGATTGTGAACAACGTTGTT----GGTACCCAGGTCGATGT 341
* *** **** ** * * **** ******* * * * *** *
consensus_12047#0 GGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAG-ATTCTTGGCGCCG 411
consensus_12047#1 GGATCGGGTCATACATGGTTCGCGCTTCACTGGCGTCGGGGCGCAG-ATTCTTGGCGCCG 417
consensus_12047#2 GGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTGGTCTGTAGCATTGTTCAGGTCG 401
*** * ** * * * * *** * ** * ** *** ** * **
consensus_12047#0 A-----TGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAGTAG 466
consensus_12047#1 A-----TGATAAGTACATATGCCAGTTCACCGAGAAATCCAATAACTTTTGGGGAAG--- 469
consensus_12047#2 AGCCATCGATAGGTAGAGATG--AATAGGCCCTCCAATCTTGTCACACCTTGAGTCTT-- 457
* **** *** * *** * * ** **** * ** * * *
consensus_12047#0 GCATGAACTAATGCTCGGAAACACTTTCATTCCCAATAATGGTTCAACACCCCCAGAAGG 526
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GGAGGTTCCCCCTCAGGAATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGAT 586
consensus_12047#1 -----------------AATTTTCTAGTCGAGTTTTGGAAGGCTTCCAAGTGACACCGAT 512
consensus_12047#2 -----------------GATCTGTTCCTCACTTAGCATCATGTTTTCA-GCCAGAGAACT 499
** * * ** * * * ** ** * * * *
consensus_12047#0 TTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAAC 646
consensus_12047#1 TTGGCATCAAGGCTTTATACGTGATGATGGAAGGTCAAAGTATGTGCCAAATGTCCAAAC 572
consensus_12047#2 ACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGC-C 558
* * ** * * *** * ** * ** * * * *
consensus_12047#0 AGCTAGGTGGGAGTACAGCACTCGA-CCAGTATATGGCTGGGGTGATGTCACGTCAAAGC 705
consensus_12047#1 AGCTAGGTGGGAGTACAGCACTCGA-CCAGTATATGGCTGGGGTGATGTCACGTCAAAGC 631
consensus_12047#2 TTTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGG-ATGCTGTAATTCA 617
**** * * * * * ** * * ** ** * ** *
consensus_12047#0 AGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTTGAACCTCATTGGCAAATAT 765
consensus_12047#1 AGAAATCAACTGCTGGTTGGCTTGCTGCTTTTCCTTTCTTT------------------- 672
consensus_12047#2 AGAAAATAAGTA-TAATTCATCTTAGGCAGTTCCATCCAAAAAAAAAA------------ 664
***** ** * * ** * ** **** * *
consensus_12047#0 GCATGGCTGGTGGCTTATCCACAGGATGGATTGAATGGGACGGAGAGCGGTTTGAATTTG 825
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 AAAATGCTCCTTCTTATTCAGAAAAGAACTGGGGTGCAGGTTTTCCGAGGAAGTGGTATT 885
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GGGTCCAGTGCAATGTCTTCTCAGGCGCATCTGGTGAAGTTGCATTAACGGCTGCTGGCG 945
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GATTAAGGAAAATTGGATTGGGCGAAACCTATGAAAGTCCTTCACTGATTGGAATTCATT 1005
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 ATGAGGGAAAATTCTATGAATTTGTGCCTTGGACCGGGACAGTGAGCTGGGACATTGCCC 1065
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 CTTGGGGTCACTGGAAGTTGTCCGGCGAGAACAAAAATCATCTGGTTGAAATAGAAGCAA 1125
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 CCACAAAAGAACCAGGCACTGCTTTGCGAGCTCCAACCATGGAGGCTGGACTAGTGCCAG 1185
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 CATGCAAAGACACCTGCTATGGTGATCTGAGGCTGCAAATGTGGGAAAAGAGAAATGATG 1245
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GTGGCAAGGGAAAGATGATACTCGACGCAACAAGCAACATGGCGGCACTAGAAGTTGGTG 1305
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GAGGCCCTTGGTTCAATGGTTGGAAAGGCACGACTGTTTCAAACGAGATTGTGAACAACG 1365
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 TTGTTGGTACCCAGGTCGATGTGGAGAGCCTCTTCCCTATCCCATTTCTCAAGCCCCCTG 1425
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GTCTGTAGCATTGTTCAGGTCGAGCCATCGATAGGTAGAGATGAATAGGCCCTCCAATCT 1485
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 TGTCACACCTTGAGTCTTGATCTGTTCCTCACTTAGCATCATGTTTTCAGCCAGAGAACT 1545
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 ACAGAAACAGTAAACCAATCAGCATGGAGTTTATTCTCGTTGGGTTAGAGAAAGGCGCCT 1605
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 TTCGGGTGAAATCATGTTGCACAAATTTTTACAGATCAGGAATGGATGCTGTAATTCAAG 1665
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 AAAATAAGTATAATTCATCTTAGGCAGTTCCATCCTTTTGTGCTCATCTGAACTTCTGAA 1725
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GTATCATAAAGAAGTGATAGCTGGATGCCCGGGCCTGCATCTGCAATTGTGGAGGTCTTT 1785
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 CTGGTCAGAATTGGCTGGAAACAATTGTTGTTAGCACACTTCATATGGTAAATCTTTCAG 1845
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 AGGTACTGACAGACAAAGACGTGTGTTTTCAATTATCATTGTACTAACAAGGATACCAGT 1905
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 GGGCCTAACAGCACATGACGGAAGTTCTAGCCTGTTGGCATAACATTGGATTATAGTATT 1965
consensus_12047#1 ------------------------------------------------------------
consensus_12047#2 ------------------------------------------------------------
consensus_12047#0 ACAAAGCTGAT 1976
consensus_12047#1 -----------
consensus_12047#2 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||