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Oryza sativa
cluster # 12048 cluster # 12048       Sequences # 10       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12048#0 length = 1774 sequences # 5  
consensus_12048#1 length = 1037 sequences # 1  
consensus_12048#2 length = 689 sequences # 1  
consensus_12048#3 length = 667 sequences # 2  
consensus_12048#4 length = 257 sequences # 1  

consensusID : consensus_12048#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1774
fasta sequence
                              [TTCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACACCATGGCGCCGCCGCAGCAGCTGGTGCTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCGCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCCGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACTCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGGTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATGCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTATCTCGGGGTCTGAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGGAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTGCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGAGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGGCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTTACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTTTGGATGACCATAGCAAGGCAGTAACCAGCTTAGCATCGAGTACTGATGGACTTATATTGATCTCTGGATCTGAGGATGGTAATGTTCGAGTTTGGGATACAAGAACTCAGCAAGTAATCCGAAAATTCAAACATTCCCAAGGTCCAGTGACGAATGTTCTCTTAGTAACGCCTAAACGAGTAAATCTTCCACCACTACAATCACTACGGAAAGTTTGCTCAGCAAATGGAGGATCTGAATCACGGGCTGTAATTGTGCCCCAACCTGAAAATGATGTCCAAATTTTTGGAAACTTCAGTTCCGACTTTCTGGAGCGCTGCCTGGATGCACTT---CAGCCTGGCAGTTCGTCCAGATTGTTTGAATCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGACCTCTTTGTGCGTGAGGTTCTTG-ATCAGATG-CCGTCT-CCAAAGAATACATGATA-TGCA-ACTGATTATTATGGT-CATTGCTGTCAA-TTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCATGAGTTCATTGGAACTA-TTGTA-GCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCACCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATCTGAAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTAGGGAGTAATATCTTTGTATCTTGCTGCCGGGTGAACAAAAAGGGA]

[+] EMBL AK111780             [TTCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACACCATGGCGCCGCCGCAGCAGCTGGTGCTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCGCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCCGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACTCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGGTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATGCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTATCTCGGGGTCTGAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGGAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTGCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGAGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGGCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTTACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTTTGGATGACCATAGCAAGGCAGTAACCAGCTTAGCATCGAGTACTGATGGACTTATATTGATCTCTGGATCTGAGGATGGTAATGTTCGAGTTTGGGATACAAGAACTCAGCAAGTAATCCGAAAATTCAAACATTCCCAAGGTCCAGTGACGAATGTTCTCTTAGTAACGCCTAAACGAGTAAATCTTCCACCACTACAATCACTACGGAAAGTTTGCTCAGCAAATGGAGGATCTGAATCACGGGCTGTAATTGTGCCCCAACCTGAAAATGATGTCCAAATTTTTGGAAACTTCAGTTCCGACTTTCTGGAGCGCTGCCTGGATGCACTT   CAGCCTGGCAGTTCGTCCAGATTGTTTGAATCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGACCTCTTTGTGCGTGAGGTTCTTG ATCAGATG CCGTCT CCAAAGAATACATGATA TGCA ACTGATTATTATGGT CATTGCTGTCAA TTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCATGAGTTCATTGGAACTA TTGTA GCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCACCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATCTGAAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGG                                                 ]
[+] EMBL OS1006A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGTCCAGTGACGAATGTTCTCTTAGTAACGCCTAAACGAGTAAATCTTCCACCACTACAATCACTACGGAAAGTTTGCTCAGCAAATGGAGGATCTGAATCACGGGCTGTAATTGTGCCCCAACCTGAAAATGATGTCCAAATTTTTGGAAACTTCAGTTCCGACTTTCTGGAGCGCTGCCTGGATGCACTTCAGCAGCCTGGCAGTTCGTCCAGATTGTTTGAATCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGNGTTACAGGACCTCTTTGTGCGTGAGGTTCTTG ATCAGATG CCGTCT NCAAAGAATACATGATA TGCA ACTGATTATTATGGT CATTGCTGTCAA TTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGGTTCTAACCGACTAGAAAACCTTGG AGGTCTAATTCATCAGCG AGTGTAACATCAA TTTTGCAAATTATGAGTGGAGGGGTGAGCAGGGGGC TTNAAT CCCCATG GGTCATGGG  CTA TT NA GGTGG GCAA  TTTAT CNNA TAGGNCTTCCGG CT AGGTCCT  AAAG GNACTTgg                                                                                                                                                                                  ]
[+] EMBL C26985               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATNATGTCCAAATTTTTGGAAACTTCAGTTCCGACTTTTTGGAGCGNTGCCTGGATGCACTT   CAGNCTGGCAGTTCGTCCAGATTGTTTGANTCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGACCTCTTTNTGCGTGAGGTTCTTG ATCAGATG CCGTCT CCAAAGANTACATGATA TGCA ACTGATTATNATGGT CATTGCTGTCAA TTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCG AGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCATGAGTTCATTGGGACTATTTGTAGGCTGGNGCAAATTTTATAC                                                                                                                                                                                                                            ]
[-] EMBL CB653209             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGATTGTTTGAATCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGACCTCTTTGTGCGTGAGGTTCTTG ATCAGATG CCGTCT CCAAAGAATACATGATA TGCA ACTGATTATTATGGT CATTGCTGTCAA TTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGAGTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCATGAGTTCATTGGAACTA TTGTA GCTGGAGCAAATTTTATAGTAATTAGCATTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCACCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATGTGAAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTAGGGAGTAATATCTTTGTATCTTGCTGCCGGGTGAACAAAAAGGGA]
[+] EMBL C98193               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCTTGAACCAGATGCCCGTCTCCCAAAGAATACATGATATTGCANCCTGNTTATTATGGTCCATTGNTGTCAATTTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCATGAGTTCATTGGAACTA TTGTA GCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCACCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAA                                                                                              ]


>consensus_12048#0 TTCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACAC ACCATGGCGCCGCCGCAGCAGCTGGTGCTCGCGGCCTCTTCCACCGACGCCGGCGTTGCC GCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCC CGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAAC TCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCG GTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGG ATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCAT GCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTATCTCGGGGTCT GAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTG GAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTT GCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGG AGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTG GCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTT ACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCT TTGGATGACCATAGCAAGGCAGTAACCAGCTTAGCATCGAGTACTGATGGACTTATATTG ATCTCTGGATCTGAGGATGGTAATGTTCGAGTTTGGGATACAAGAACTCAGCAAGTAATC CGAAAATTCAAACATTCCCAAGGTCCAGTGACGAATGTTCTCTTAGTAACGCCTAAACGA GTAAATCTTCCACCACTACAATCACTACGGAAAGTTTGCTCAGCAAATGGAGGATCTGAA TCACGGGCTGTAATTGTGCCCCAACCTGAAAATGATGTCCAAATTTTTGGAAACTTCAGT TCCGACTTTCTGGAGCGCTGCCTGGATGCACTTCAGCCTGGCAGTTCGTCCAGATTGTTT GAATCTGGGGCCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGAGT AAATACTTGGAGTTACAGGACCTCTTTGTGCGTGAGGTTCTTGATCAGATGCCGTCTCCA AAGAATACATGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGAGATTGTCAT CAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAAT TCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGC TTTGCATCCCCCATGAGTTCATTGGAACTATTGTAGCTGGAGCAAATTTTATACTAATTA GCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCACCACTGAA TTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAA CATCTGAAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTAGGGAGTAATAT CTTTGTATCTTGCTGCCGGGTGAACAAAAAGGGA



consensusID : consensus_12048#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1037
fasta sequence
                              [TCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACACCATGGCGCCGCCGCAGCAGCTGGTGTTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCGCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCCGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACTCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGGTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATGCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTGTCTCGGGGTCTGAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGGAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTGCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGAGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGGCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTTACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTTTGGATGACCATAGGTTTGCCTACTCCTTGCTTTCATTAGCACCTCTTATTTATCCTGTGATGTAAACAGCTTCAATATACAAGTTAGAGTTTGATATCTTGTAGTAGTAGAGTGGTTATAAACCTATCTTACCTGTTCATGCTTTAACTTTGGTTGTATCCATCCTAGCTCGACCAGTTTGTTTTTAATGAAAACAT]

[+] EMBL AK108466             [TCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACACCATGGCGCCGCCGCAGCAGCTGGTGTTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCGCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCCGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACTCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGGTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATGCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTGTCTCGGGGTCTGAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGGAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTGCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGAGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGGCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTTACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTTTGGATGACCATAGGTTTGCCTACTCCTTGCTTTCATTAGCACCTCTTATTTATCCTGTGATGTAAACAGCTTCAATATACAAGTTAGAGTTTGATATCTTGTAGTAGTAGAGTGGTTATAAACCTATCTTACCTGTTCATGCTTTAACTTTGGTTGTATCCATCCTAGCTCGACCAGTTTGTTTTTAATGAAAACAT]


>consensus_12048#1 TCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACA CCATGGCGCCGCCGCAGCAGCTGGTGTTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCG CGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCC GCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACT CAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGG TTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGA TCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATG CACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTGTCTCGGGGTCTG AAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGG AGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTG CTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGA GTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGG CGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTTA CTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTT TGGATGACCATAGGTTTGCCTACTCCTTGCTTTCATTAGCACCTCTTATTTATCCTGTGA TGTAAACAGCTTCAATATACAAGTTAGAGTTTGATATCTTGTAGTAGTAGAGTGGTTATA AACCTATCTTACCTGTTCATGCTTTAACTTTGGTTGTATCCATCCTAGCTCGACCAGTTT GTTTTTAATGAAAACAT



consensusID : consensus_12048#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [GACCTTCACTTCCGCCCTTTTGGAGCCCTAGCCTGGATGCACTTCAGCCTGGCAGTTGGTCCAAATTGTTTAAATCTGGGGGCCAGGGCTCTGTATGGTGCCCCAAAACACCAGGGTGTAGAATGGAGGAGTAAATCCTTGGAGTTACCGGGCCTTTTTGTGCGTGAGGTTTTTGATCAGATGCCGTCTCCAAAGAATACCTGATATGCAACTGATTCTTATGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCTGAGTTCATTGGAACTATTCTAGCTGGAGCAAATTTTATACTAATTAGCCCTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATTTGGAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTATGGAGTAATATCTTTGTATCTTGCTACAGAGTAATTATATTCGATGGAAACTACTTTGTGTGGATCCAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760676             [GACCTTCACTTCCGCCCTTTTGGAGCCCTAGCCTGGATGCACTTCAGCCTGGCAGTTGGTCCAAATTGTTTAAATCTGGGGGCCAGGGCTCTGTATGGTGCCCCAAAACACCAGGGTGTAGAATGGAGGAGTAAATCCTTGGAGTTACCGGGCCTTTTTGTGCGTGAGGTTTTTGATCAGATGCCGTCTCCAAAGAATACCTGATATGCAACTGATTCTTATGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCCTGAGTTCATTGGAACTATTCTAGCTGGAGCAAATTTTATACTAATTAGCCCTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATTTGGAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTATGGAGTAATATCTTTGTATCTTGCTACAGAGTAATTATATTCGATGGAAACTACTTTGTGTGGATCCAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12048#2 GACCTTCACTTCCGCCCTTTTGGAGCCCTAGCCTGGATGCACTTCAGCCTGGCAGTTGGT CCAAATTGTTTAAATCTGGGGGCCAGGGCTCTGTATGGTGCCCCAAAACACCAGGGTGTA GAATGGAGGAGTAAATCCTTGGAGTTACCGGGCCTTTTTGTGCGTGAGGTTTTTGATCAG ATGCCGTCTCCAAAGAATACCTGATATGCAACTGATTCTTATGGTCATTGCTGTCAATTA GGAGATTGTCATCAGTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTT GGAAGCTCTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGG TGAGCAGGGGGCTTTGCATCCCCCTGAGTTCATTGGAACTATTCTAGCTGGAGCAAATTT TATACTAATTAGCCCTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTT CCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATG TTACAGAAAAACATTTGGAATACAAAGTAACTTGAAAAGGAGCGAGACGCAAGTGGGTTA TGGAGTAATATCTTTGTATCTTGCTACAGAGTAATTATATTCGATGGAAACTACTTTGTG TGGATCCAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12048#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 667
fasta sequence
                              [AGGTCATAAGGGCCCCCCCCAGGGGGGGAGGTGTAATCCCGGGGGGGACGGTGCCCCCCCTAAAGGTGATGTCCGAGTTTGGGAAACTTCAGGTCGGCTGTTGCGGGGGCGCCCGGATGCATTTAAGGCTGCCAGTTCGTCCAGATTGTTGAATCTGGGGCCCAGTGCTCTGTATGGTGCCCCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGGCCTCTTTGTGCGTGAGATTCTTGATCAGAAGCCGTCTCCAAAGAATACCTGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCCCATGAGTTGGTTTTTAACCGACTAGAAAACCTTGGAAGCTTTAATTTATCAGCGAAGTGTAACATCAATTTTTGCAATTTTTGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCATGAGTTCATTGGAACTATTTTAGCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATTTGAAATACAAAGTAACTTGAAAAAAAAAAAAAA]

[-] EMBL CA761480             [AGGTCATAAGGGCCCCCCCCAGGGGGGGAGGTGTAATCCCGGGGGGGACGGTGCCCCCCCTAAAGGTGATGTCCGAGTTTGGGAAACTTCAGGTCGGCTGTTGCGGGGGCGCCCGGATGCATTTAAGGCTGCCAGTTCGTCCAGATTGTTGAATCTGGGGCCCAGTGCTCTGTATGGTGCCCCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGGCCTCTTTGTGCGTGAGATTCTTGATCAGAAGCCGTCTCCAAAGAATACCTGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCCCATGAGTTGGTTTTTAACCGACTAGAAAACCTTGGAAGCTTTAATTTATCAGCGAAGTGTAACATCAATTTTTGCAATTTTTGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCATGAGTTCATTGGAACTATTTTAGCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATTTGAAATACAAAGTAACTTGAAAAAAAAAAAAAA]
[-] EMBL CA761442             [AGGTCATAAGGGCCCCCCCCAGGGGGGGAGGTGTAATCCCGGGGGGGACGGTGCCCCCCCTAAAGGTGATGTCCGAGTTTGGGAAACTTCAGGTCGGCTGTTGCGGGGGCGCCCGGATGCATTTAAGGCTGCCAGTTCGTCCAGATTGTTGAATCTGGGGCCCAGTGCTCTGTATGGTGCCCCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGGCCTCTTTGTGCGTGAGATTCTTGATCAGAAGCCGTCTCCAAAGAATACCTGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCCCATGAGTTGGTTTTTAACCGACTAGAAAACCTTGGAAGCTTTAATTTATCAGCGAAGTGTAACATCAATTTTTGCAATTTTTGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCATGAGTTCATTGGAACTATTTTAGCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAGCCTTATGGTAGGTAACATGTTACAGAAAAACATTTGAAATACAAAGTAACTTGAAAAAAAAAAAAAA]


>consensus_12048#3 AGGTCATAAGGGCCCCCCCCAGGGGGGGAGGTGTAATCCCGGGGGGGACGGTGCCCCCCC TAAAGGTGATGTCCGAGTTTGGGAAACTTCAGGTCGGCTGTTGCGGGGGCGCCCGGATGC ATTTAAGGCTGCCAGTTCGTCCAGATTGTTGAATCTGGGGCCCAGTGCTCTGTATGGTGC CCCAAAACAACAGGGTGTAGAATGGAGGAGTAAATACTTGGAGTTACAGGGCCTCTTTGT GCGTGAGATTCTTGATCAGAAGCCGTCTCCAAAGAATACCTGATATGCAACTGATTATTA TGGTCATTGCTGTCAATTAGGAGATTGTCATCAGTTTTAGCCAGCCCATGAGTTGGTTTT TAACCGACTAGAAAACCTTGGAAGCTTTAATTTATCAGCGAAGTGTAACATCAATTTTTG CAATTTTTGAGTGGAGGGGTGAGCAGGGGGCTTTGCATCCCCATGAGTTCATTGGAACTA TTTTAGCTGGAGCAAATTTTATACTAATTAGCACTTCCGGCCTCAGCTCCTCAAAAGTGT ACTTTGTGCTTCTCTGGTTCCCCCCCTGAATTTATGTGTACTTTGTGTCTTTGTATTGAG CCTTATGGTAGGTAACATGTTACAGAAAAACATTTGAAATACAAAGTAACTTGAAAAAAA AAAAAAA



consensusID : consensus_12048#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 257
fasta sequence
                              [ACGAGCTCGTGCCGAATTCNGCNGAAAGANGGGTGAGCATGGGGNTTTGCATCCCCATGAGTTCATNGGNAACTATTCTACCTGGAGCAAATTTTATNCTAATTATCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTNGTGCTTCTCTGGTTCCANCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGANCCNTATNGTAGGTNACATGTTACNGAAAAACATCTGAAATACAAAGTAACTTGAAAAAAAAA]

[+] EMBL BE228997             [ACGAGCTCGTGCCGAATTCNGCNGAAAGANGGGTGAGCATGGGGNTTTGCATCCCCATGAGTTCATNGGNAACTATTCTACCTGGAGCAAATTTTATNCTAATTATCACTTCCGGCCTCAGCTCCTCAAAAGTGTACTTNGTGCTTCTCTGGTTCCANCACTGAATTTATGTGTACTTTGTGTCTTTGTATTGANCCNTATNGTAGGTNACATGTTACNGAAAAACATCTGAAATACAAAGTAACTTGAAAAAAAAA]


>consensus_12048#4 ACGAGCTCGTGCCGAATTCNGCNGAAAGANGGGTGAGCATGGGGNTTTGCATCCCCATGA GTTCATNGGNAACTATTCTACCTGGAGCAAATTTTATNCTAATTATCACTTCCGGCCTCA GCTCCTCAAAAGTGTACTTNGTGCTTCTCTGGTTCCANCACTGAATTTATGTGTACTTTG TGTCTTTGTATTGANCCNTATNGTAGGTNACATGTTACNGAAAAACATCTGAAATACAAA GTAACTTGAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      TTCTCCCACGCGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACAC 60
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      ACCATGGCGCCGCCGCAGCAGCTGGTGCTCGCGGCCTCTTCCACCGACGCCGGCGTTGCC 120
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GCGTGGGACCTCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCC 180
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      CGCGCTCTCACCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAAC 240
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      TCAGCACCCATCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCG 300
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GTTGAGCCGATACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGG 360
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      ATCTCTGGCGACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCAT 420
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GCACATTATCGTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTATCTCGGGGTCT 480
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GAAGACGGTAGCATCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTG 540
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GAGGCAAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTT 600
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GCTTGCTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGG 660
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      AGTCTATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTG 720
consensus_12048#1      ------------------------------------------------------------
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GCGTTAGACCCAAGGAGTCATATTTTCTACGCTGGTGGTCGAGATGGAAAGATATATGTT 780
consensus_12048#1      ---------------------------------------------------TCTCCCACG 9
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      ACTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCT 840
consensus_12048#1      CGGCCGCGCCATCACGTCCGCCGCTCCCTGTCTTCCGTCCCCTCCAACACACCATGGCGC 69
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      TTGGATGACCATAGCAAGGCAGTAACCAGCTTAGCATCGAGTACTGATGGACTTATATTG 900
consensus_12048#1      CGCCGCAGCAGCTGGTGTTCGCGGCCTCTTCCACCGACGCCGGCGTTGCCGCGTGGGACC 129
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      ATCTCTGGATCTGAGGATGGTAATGTTCGAGTTTGGGATACAAGAACTCAGCAAGTAATC 960
consensus_12048#1      TCCGCACGGGCGCCGAGGCCATCCGCCACCGCACCTGCGCCTCCCGCCCCCGCGCTCTCA 189
                                                                                   

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      CGAAAATTCAAACATTCCCAAGGTCCAGTGACGAATGTTCTCTTAGTAACGCCTAAACGA 1020
consensus_12048#1      CCGTCGTCGCCGGCCGCTTCCTCGCCGCCTCCCAGGCCCCCGCCGGCAACTCAGCACCCA 249
                                                                                   

consensus_12048#3      -------------------------AGGTCATAAGGGCCCCCCCCAGGGGGGGAGGTGTA 35
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ------------------------------------------------------------
consensus_12048#0      GTAAATCTTCCACCACTACAATCACTACGGAAAGTTTGCTCAGCAAATGGAGGATCTGAA 1080
consensus_12048#1      TCCACTACTACCACTGGGACAAGCCCCAGGTGGCCGTCAAGAGCTTCCCGGTTGAGCCGA 309
                                                                                   

consensus_12048#3      ATCCCGGGGGGGACGGTGCCCCC-CCTAAAGGTGATGTCCGAGTTTG-GGAAACTTCAGG 93
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      --------------------------------------------------GACCTTCACT 10
consensus_12048#0      TCACGGGCTGTAATTGTGCCCCAACCTGAAAATGATGTCCAAATTTTTGGAAACTTCAGT 1140
consensus_12048#1      TACGCGCGCTCATCGCTGATCCGGAGGGGAGCTACCTCATCGGCGGTGGGATCTCTGGCG 369
                                                                                   

consensus_12048#3      TCGGCTGTTGCGGGGGC---GCCCGGATGCATTTAAGGCTGCCAGTTCGTCCAGATTGTT 150
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      TCCGCCCTTTTGGAGCCCTAGCCTGGATGCACTTCAGCCTGGCAGTTGGTCCAAATTGTT 70
consensus_12048#0      TCCGACTTTCTGGAGCGCT-GCCTGGATGCACTTCAGCCTGGCAGTTCGTCCAGATTGTT 1199
consensus_12048#1      ACATATTCTTTTGGGAGGTGGCTAGTGGGGAGTTGCTTGTCCAGTGGCATGCACATTATC 429
                                                                                   

consensus_12048#3      -GAATCTGGGGCCCAGTGCTCTGTATGGTGCCCCAAAACAACAGGGTGTAGAATGGAGGA 209
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      TAAATCTGGGGGCCAGGGCTCTGTATGGTGCCCCAAAACACCAGGGTGTAGAATGGAGGA 130
consensus_12048#0      TGAATCTGGGG-CCAGTGCTCTGTATGGTGCACCAAAACAACAGGGTGTAGAATGGAGGA 1258
consensus_12048#1      GTGCTGTTAGGTGCCTTGCACTCTATGACTTTTTGCTTGTCTCGGGGTCTGAAGACGGTA 489
                                                                                   

consensus_12048#3      GTAAATACTTGGAGTTACAGGGCCTCTTTGTGCGTGAGATTCTTGATCAGAAGCCGTCTC 269
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      GTAAATCCTTGGAGTTACCGGGCCTTTTTGTGCGTGAGGTTTTTGATCAGATGCCGTCTC 190
consensus_12048#0      GTAAATACTTGGAGTTACAGGACCTCTTTGTGCGTGAGGTTCTTGATCAGATGCCGTCTC 1318
consensus_12048#1      GCA-----TCAAAGTTTGGGATCTCCTCACGATGCTTGATGAGCAATCAAGATTGGAGGC 544
                                                                                   

consensus_12048#3      CAAAGAATACCTGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGA--GATTG 327
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      CAAAGAATACCTGATATGCAACTGATTCTTATGGTCATTGCTGTCAATTAGGA--GATTG 248
consensus_12048#0      CAAAGAATACATGATATGCAACTGATTATTATGGTCATTGCTGTCAATTAGGA--GATTG 1376
consensus_12048#1      AAAGACACAACACATATACAGCTTTAATCAGCACGCACTTCCTGTAACCGATGTTGCTTG 604
                                                                                   

consensus_12048#3      TCATCA-GTTTTAGCCAGCCCATGAGTTGGTTTTTAACCGACTAGAAAACCTTGGAAGCT 386
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      TCATCA-GTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCT 307
consensus_12048#0      TCATCA-GTTTTAGCCAGCACATGAGTTGGTTTCTAACCGACTAGAAAACCTTGGAAGCT 1435
consensus_12048#1      CTGTCATGGAGCAATTGCTGTATCATCTTCAGAGGATCACACCTGTAAAATTTGGAGTCT 664
                                                                                   

consensus_12048#3      TTAATTTATCAGCGAAGTGTAACATCAATTTTTGCAATTTTTGAGTGGAGGGGTGAGCAG 446
consensus_12048#4      --------------------ACGAGCTCGTGCCGAATTCNGCNGAAAGANGGGTGAGCAT 40
consensus_12048#2      CTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAG 367
consensus_12048#0      CTAATTCATCAGCGAAGTGTAACATCAATTTTTGCAATTTATGAGTGGAGGGGTGAGCAG 1495
consensus_12048#1      ATCCGAGGGTAGAATGCTAAGAAGCATTTCATTTCCTTCTATTACTGATTCAGTGGCGTT 724
                                                            *              ***     

consensus_12048#3      GGGGCTTTGCATCCCC-ATGAGTTCATTGGAA-CTATTTTAGCTGGAGCAAATTTTATAC 504
consensus_12048#4      GGGGNTTTGCATCCCC-ATGAGTTCATNGGNAACTATTCTACCTGGAGCAAATTTTATNC 99
consensus_12048#2      GGGGCTTTGCATCCCC-CTGAGTTCATTGGAA-CTATTCTAGCTGGAGCAAATTTTATAC 425
consensus_12048#0      GGGGCTTTGCATCCCCCATGAGTTCATTGGAA-CTATTGTAGCTGGAGCAAATTTTATAC 1554
consensus_12048#1      AGACCCAAGGAGTCATATTTTCTACGCTGG----TGGTCGAGATGGAAAGATATATGTTA 780
                        *      * *  *    *   * *   **    *  *  *  ****   *  * * *  

consensus_12048#3      TAATTAGCACTTCCGGCCTCAGCTCCTCAAA-AGTG-TACTTTGTGCTTCTCTGGTTCCC 562
consensus_12048#4      TAATTATCACTTCCGGCCTCAGCTCCTCAAA-AGTG-TACTTNGTGCTTCTCTGGTTCCA 157
consensus_12048#2      TAATTAGCCCTTCCGGCCTCAGCTCCTCAAA-AGTG-TACTTTGTGCTTCTCTGGTTCCC 483
consensus_12048#0      TAATTAGCACTTCCGGCCTCAGCTCCTCAAA-AGTG-TACTTTGTGCTTCTCTGGTTCCA 1612
consensus_12048#1      CTGCTATGGGAATTGATGTCACCTCTCCTAGTAGTGATGATTCAACTATTAATGGGGCTT 840
                           **        *   *** ***  * *  **** *  **      *   ***  *  

consensus_12048#3      CCCCTGAATTTATGTGTACTTTGTGTCT--TTGTATTGAGCCTTATGGTAGGTAACATGT 620
consensus_12048#4      NCACTGAATTTATGTGTACTTTGTGTCT--TTGTATTGANCCNTATNGTAGGTNACATGT 215
consensus_12048#2      CCCCTGAATTTATGTGTACTTTGTGTCT--TTGTATTGAGCCTTATGGTAGGTAACATGT 541
consensus_12048#0      CCACTGAATTTATGTGTACTTTGTGTCT--TTGTATTGAGCCTTATGGTAGGTAACATGT 1670
consensus_12048#1      TGGATGACCATAGGTTTGCCTACTCCTTGCTTTCATTAGCACCTCT--TATTTATCCTGT 898
                           ***   ** ** * * *  *   *  **  ***    * * *  **  *  * ***

consensus_12048#3      TACAGAAAAACATTTGAAATACAAAGTAA--CTTGAAAAAAAAAAAAAA----------- 667
consensus_12048#4      TACNGAAAAACATCTGAAATACAAAGTAA--CTTGAAAAAAAAA---------------- 257
consensus_12048#2      TACAGAAAAACATTTGGAATACAAAGTAA--CTTGAAAAGGAGCGAGACGCAAGTGGGTT 599
consensus_12048#0      TACAGAAAAACATCTGAAATACAAAGTAA--CTTGAAAAGGAGCGAGACGCAAGTGGGTT 1728
consensus_12048#1      GATGTAAACAGCTTCAATATACAAGTTAGAGTTTGATATCTTGTAGTAGTAGAGTGGTTA 958
                        *   *** *  *     ******  **    **** *                      

consensus_12048#3      ------------------------------------------------------------
consensus_12048#4      ------------------------------------------------------------
consensus_12048#2      ATGGAGTAATATCTTTGTATCTTGCTACAGAGTAATTATATTCGATGGAAACTACTTTGT 659
consensus_12048#0      AGGGAGTAATATCTTTGTATCTTGCTGCCGGGTGAACAAAAAGGGA-------------- 1774
consensus_12048#1      TAAACCTATCTTACCTGTTCATGCTTTAACTTTGGTTGTATCCATCCTAGCTCGACCAGT 1018
                                                                                   

consensus_12048#3      ------------------------------
consensus_12048#4      ------------------------------
consensus_12048#2      GTGGATCCAAAAAAAAAAAAAAAAAAAAAA 689
consensus_12048#0      ------------------------------
consensus_12048#1      TTGTTTTTAATGAAAACAT----------- 1037
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)