cluster # 12053

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Oryza sativa
cluster # 12053 cluster # 12053 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12053#0 length = 1524 sequences # 10
consensusID : consensus_12053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1524
fasta sequence
                              [GGCTTGCCGCCGGCGAAGGTCGTCGCGCCGAGGCTCTCGCCGGGCTTGCAGCGCACCATGGAGGACCTCGCCGTCGACAAGATCGTCAACAACGGCGTCGGGCTCGTCGACCCGCGCCGCGCGCGGGAGCTCTACGAGGGGCTCCACTCCCACCTCCAGGCCTCCGGCATCGACGGTGTCAAGGTCGACGTCATCCATCTGCTGGAGATGGTGTGCGAGGAGTACGGCGGTCGGGTGGAGCTCGCGAAGGCCTACTTCGCTGGGCTGACGGAGTCGGTGCGGCGCCACTTCAACGGCAACGGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCACGCCGCCTCCCGCGCCGTCTCCGGCGGCCCCGTCTACGTCAGCGACGCCGTGGGGTGCCACGACTTCGACCTGCTCCGCCGCCTCGCGCTGCCGGATGGGACCATACTCCGGTGCGAGCGCTACGCGCTG-CCGACGCGCGAC-TGCCTGTTCGCCGACCCGCTCCATGACGGGAAGACGATGCTCAAGATCTGGAACGTGAACAAGTTCTCCGGCGTGCTCGGCGCGTTCAACTGCCAGGGCGGCGGGTGGAGCCGCGAGGCGCGGCGGAACATGTGCGCCGCGGGGTTCTCCGTCCCCGTCACCGCGCGCGCCTCCCCCGCCGACGTCGAGTGGAGCCA---CGGCGGCGGCGGCGGCGACCGCTTCGCCGTCTACTTCGTCGAGGCGCGGAAGCTGCAGCTGCTCCGCCGCGACGAGTCCGTCGAGCTCACGCTCGAGCCGTTCA-CCTACGAGCTCCTCGTGGTGGCGCCCGTGCGGGCCATCGTCTC-GCCGGAGCTGGGGATCGGCTTCGCGCCCATCGGGCTCGCCAACATGCTGAACGCCGGCGGCGCC--GTGCAGGGCTTCGAGGCGGCGAGGAAGGAC-GGC-GACGTGGC-GGCGGAGGTGGC-GGTG-AAGGGCGCCGGGG-AGATGGTGGC-GT-ACTCGTCGGCG-AGGCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTGAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTT-AATGTGAATT-AATGCAACTATGCAAGTGTTACTTT-ATCAAAAAAAAAGGGGAA]

[+] EMBL CB655597             [GGCTTGCCGCCGGCGAAGGTCGTCGCGCCGAGGCTCTCGCCGGGCTTGCAGCGCACCATGGAGGACCTCGCCGTCGACAAGATCGTCAACAACGGCGTCGGGCTCGTCGACCCGCGCCGCGCGCGGGAGCTCTACGAGGGGCTCCACTCCCACCTCCAGGCCTCCGGCATCGACGGTGTCAAGGTCGACGTCATCCATCTGCTGGAGATGGTGTGCGAGGAGTACGGCGGTCGGGTGGAGCTCGCGAAGGCCTACTTCGCTGGGCTGACGGAGTCGGTGCGGCGCCACTTCAACGGCAACGGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCACGCCGCCTCCCGCGCCGTCTCCGGCGGCCCCGTCTACGTCAGCGACGCCGTGGGGTGCCACGACTTCGACCTGCTCCGCCGCCTCGCGCTGCCGGATGGGACCATACTCCGGTGCGAGCGCTACGCGCTG CCGACGCGCGAC TGCCTGTTCGCCGACCCGCTCCATGACGGGAAGACGATGCTCAAGATCTGGAACGTGAACAAGTTCTCCGGCGTGCTCGGCGCGTTCAACTGCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB624209             [                                                                                                                                                                            ACGGCGTCAAGGTCGACGTCATCCATCTGCTGGAGATGGTGTGCGAGGAGTACGGCGGTCGGGTGGAGCTCGCGAAGGCCTACTTCGCTGGGCTGACGGAGTCGGTGCGGCGCCACTTCAACGGCAACGGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCACGCCGCCTCCCGCGCCGTCTCCGGCGGCCCCGTCTACGTCAGCGACGCCGTGGGGTGCCACGACTTCGACCTGCTCCGCCGCCTCGCGCTGCCGGATGGGACCATACTCCGGTGCGAGCGCTACGCGCTG CCGACGCGCGAC TGCCTGTTCGCCGACCCGCTCCATGACGGGAAGACGATGCTCAAGATCTGGAACGTGAACAAGTTCTCCGGCGTGCTCGGCGCGTTCAACTGCCAGGGCGGCGGGTGGAGCCGCGAGGCGCGGCGGAACATGTGCGCCGCGGGGTTCTCCGTCCCCGTCACCGCGCGCGCCTCCCCCGCCGACGTCGAGTGGAGCCACGGCGGCGGCGGCGGCGGCGACCGCTTCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS2852A             [                                                                                                                                                                                          GACGTCATCCATCTGCTGGAGATGGTGTGCGAGGAGTACGGCGGTCGGGTGGAGCTCGCGAAGGCCTACTTCGCTGGGCTGACGGAGTCGGTGCGGCGCCACTTCAACGGCAACGGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK061224             [                                                                                                                                                                                                                                                                                                            GGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCACGCCGCCTCCCGCGCCGTCTCCGGCGGCCCCGTCTACGTCAGCGACGCCGTGGGGTGCCACGACTTCGACCTGCTCCGCCGCCTCGCGCTGCCGGATGGGACCATACTCCGGTGCGAGCGCTACGCGCTG CCGACGCGCGAC TGCCTGTTCGCCGACCCGCTCCATGACGGGAAGACGATGCTCAAGATCTGGAACGTGAACAAGTTCTCCGGCGTGCTCGGCGCGTTCAACTGCCAGGGCGGCGGGTGGAGCCGCGAGGCGCGGCGGAACATGTGCGCCGCGGGGTTCTCCGTCCCCGTCACCGCGCGCGCCTCCCCCGCCGACGTCGAGTGGAGCCA   CGGCGGCGGCGGCGGCGACCGCTTCGCCGTCTACTTCGTCGAGGCGCGGAAGCTGCAGCTGCTCCGCCGCGACGAGTCCGTCGAGCTCACGCTCGAGCCGTTCA CCTACGAGCTCCTCGTGGTGGCGCCCGTGCGGGCCATCGTCTC GCCGGAGCTGGGGATCGGCTTCGCGCCCATCGGGCTCGCCAACATGCTGAACGCCGGCGGCGCC  GTGCAGGGCTTCGAGGCGGCGAGGAAGGAC GGC GACGTGGC GGCGGAGGTGGC GGTG AAGGGCGCCGGGG AGATGGTGGC GT ACTCGTCGGCG AGGCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTGAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTT AATGTGAATT AATGCAACTATGCAAGTG                          ]
[+] EMBL C72550               [                                                                                                                                                                                                                                                                                                                                       AACGACTTCATGCTGCTGGGCACGGAGGCGGTGGCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGCACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGCGCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCACGCCGCCTCCCGCGCCGTCTCCGGGGGCCCCGTCTACGTCAGCGACGCCGTGGGGTG CACGACTTCGACCTGCTCCGCCGNCTCGNGTTGCCGGATGGGACCATACTTCGGTGCGAGCG TACG GTTGCCCGACGNGCGACTTACTTTTTCGNCGACCCG TTCATGACGGGAAGACGATG TNAAGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB624210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGCGAGCGCCTCCCCCGCCGACGTNGAGTGGAGCCACGGCGGCGGCGGCGGCGGCGACCGCTTCGCCGTCTACTTCGTCGAGGCGCGGAAGCTGCAGCTGCTCCGCCGCGACGAGTCCGTCGAGCTCACGCTCGAGCCGTTCA CCTACGAGCTCCTCGTGGTGGCGCCCGTGCGGGCCATCGTCTC GCCGGAGCTGGGGATCGGCTTCGCGCCCATCGGGCTCGCCAACATGTTGAACGCCGGCGGCGCC  GTGCAGGGCTTCGAGGCGGCGAGGAAGGAC GGC GACGTGGC GGCGGAGGTGGC GGTG AAGGGCTCCGGGG AGATGGTGGC GT ACTCGTCGGCG AGGCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCTCCGTCGATGTGCCGTGGCCCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTCCTTTTCCTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTTAGCGTGTGAGAGCTTTCTAAGTTGCTTAGCTCTGGTTGGTTTCGGTCGGATTATCATTTTTCCGGGTTTTAAACGCTGGTT ACTGTGAATT AATGCAACTATGCAAGTGTTACTTT A CAAACAAAAAGGGG  ]
[+] EMBL BI809581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTCACGCTCGACCCGTTCACCCTACGAGCTCCTCGTGGTGGCGCCCGTGC GGCCATCGTCTC GCCGGAGCTGGGGATCGGCTTCGCGCCCATCGGGCTC CCAACATGCTGAAC CCGGCGGC CC  GTGCAGGGCTTCGAGGCGGCGAGGAAGGAC GGC GACGTGGC GGCGGAGGTGGC GGTG AAGGGC CCGGGG AGATGGTGGC GT ACTCGTCGGCG AGGCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTC ATGCTGGAAAGAGACTAAGACCAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTTAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTT AATGTGAATT AATGCCACTATGCAAGTGTTACTTT ATCCAAAAA         ]
[+] EMBL BI797783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCTCCTCGT GT GCGCCCGT C GGCCATCTTCTCGGCCGGA CTGGGGATC GCTTCGCGCCCATCGGGCTCGCCAACATGCTGAACGCCGGCGGCCCCCAGTCCAGGGCTTCGAGGCGGCGAGGAAGGACAGGCAGACGTGGCAGGCGGAGGTGCCAGGTG AAGGGCCCCGGGG AGATGGTGGCAGT ACTCGTCGGCG A GCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTTAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTT GTTTC GTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTTAAATGTGAATTAAATGCAACTATGCAAGTGTTACTTTAATCAAAA           ]
[+] EMBL AU033094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cC GGTGNAAGGGCGCCGGGGNAGATGGTGGC GTAACTCGTCGGCGAAGGCCTAGGCTGTGCAAGGTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTGAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTT AATGTGAATT AATGCAACTATGCAAGTGTTACTTT ATCAAAAAA         ]
[+] EMBL AU166017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGATGTGCCGTGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATGCTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGAAAATAATTTGAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGATTATCATTGTTACGGGTTTTAAACGCTGGTT AATGTGAATT AATGCNACTATGCAAGTGTTACTTT ATCAAAAAAAAAcaaaaa]




>consensus_12053#0
GGCTTGCCGCCGGCGAAGGTCGTCGCGCCGAGGCTCTCGCCGGGCTTGCAGCGCACCATG
GAGGACCTCGCCGTCGACAAGATCGTCAACAACGGCGTCGGGCTCGTCGACCCGCGCCGC
GCGCGGGAGCTCTACGAGGGGCTCCACTCCCACCTCCAGGCCTCCGGCATCGACGGTGTC
AAGGTCGACGTCATCCATCTGCTGGAGATGGTGTGCGAGGAGTACGGCGGTCGGGTGGAG
CTCGCGAAGGCCTACTTCGCTGGGCTGACGGAGTCGGTGCGGCGCCACTTCAACGGCAAC
GGCGTGATCGCGAGCATGGAGCACTGCAACGACTTCATGCTGCTGGGCACGGAGGCGGTG
GCGCTGGGCCGCGTCGGCGACGACTTCTGGTGCACCGACCCCTCCGGCGACCCCGACGGC
ACCTTCTGGCTGCAGGGCTGCCACATGGTGCACTGCGCCTACAACTCTCTGTGGATGGGC
GCCTTCATCCACCCGGACTGGGACATGTTCCAGTCCACCCACCCCTGCGCCGCCTTCCAC
GCCGCCTCCCGCGCCGTCTCCGGCGGCCCCGTCTACGTCAGCGACGCCGTGGGGTGCCAC
GACTTCGACCTGCTCCGCCGCCTCGCGCTGCCGGATGGGACCATACTCCGGTGCGAGCGC
TACGCGCTGCCGACGCGCGACTGCCTGTTCGCCGACCCGCTCCATGACGGGAAGACGATG
CTCAAGATCTGGAACGTGAACAAGTTCTCCGGCGTGCTCGGCGCGTTCAACTGCCAGGGC
GGCGGGTGGAGCCGCGAGGCGCGGCGGAACATGTGCGCCGCGGGGTTCTCCGTCCCCGTC
ACCGCGCGCGCCTCCCCCGCCGACGTCGAGTGGAGCCACGGCGGCGGCGGCGGCGACCGC
TTCGCCGTCTACTTCGTCGAGGCGCGGAAGCTGCAGCTGCTCCGCCGCGACGAGTCCGTC
GAGCTCACGCTCGAGCCGTTCACCTACGAGCTCCTCGTGGTGGCGCCCGTGCGGGCCATC
GTCTCGCCGGAGCTGGGGATCGGCTTCGCGCCCATCGGGCTCGCCAACATGCTGAACGCC
GGCGGCGCCGTGCAGGGCTTCGAGGCGGCGAGGAAGGACGGCGACGTGGCGGCGGAGGTG
GCGGTGAAGGGCGCCGGGGAGATGGTGGCGTACTCGTCGGCGAGGCCTAGGCTGTGCAAG
GTGAACGGCCAGGATGCGGAGTTCAAGTACGAGGACGGCATCGTCACCGTCGATGTGCCG
TGGACCGGGTCGTCGAAGAAGCTGTCGCGTGTCGAGTACTTTTACTAGTGTGGTTCAATG
CTGGAAAGAGACTAAGACAAAATTTTCGGTCTTTTTATTTTTTATTTTACTTAGGTCGGA
AAATAATTTGAGTGTGTGAGAGCTTTGTAAGTTGCTTAGCTCTGGTTGGTTTCGGTTGGA
TTATCATTGTTACGGGTTTTAAACGCTGGTTAATGTGAATTAATGCAACTATGCAAGTGT
TACTTTATCAAAAAAAAAGGGGAA
clustalw multiple alignements is not computed in this case