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Oryza sativa
cluster # 12056 cluster # 12056       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12056#0 length = 1753 sequences # 9  
consensus_12056#1 length = 354 sequences # 1  

consensusID : consensus_12056#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1753
fasta sequence
                              [CAACAAACCAACACACATCCAACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG-CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACCATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTCCGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTGAAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTCCAGGAGGAGGACGAGCACGGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGACCATCGCCGGCAACGCGCTCAAGGCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGGCGTCGGAGCAGCTCAAGTTCGCGCTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGGTCAAGCCGTACATCCCGGACTTCCGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGCGGGCGGTGATCGACGAGCTGCAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGGCGTCGCGGATGGCGCTCCACC-GATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGAAAACTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGCGTTCTTTCCACAAGTTTCCCAACCCCTTTCCCTGGTTTTCTGAGTGCACGCTTTTCAAACTGGTAAATGGTGTATTTTTTTGCAAAAAGTTTTTATCCGAAA]

[+] EMBL AK068185             [CAACAAACCAACACACATCCAACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCAGGTGGCGCCGCGTGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACCATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTCCGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTGAAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTCCAGGAGGAGGACGAGCACGGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGACCATCGCCGGCAACGCGCTCAAGGCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGGCGTCGGAGCAGCTCAAGTTCGCGCTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGGTCAAGCCGTACATCCCGGACTTCCGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGCGGGCGGTGATCGACGAGCTGCAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGGCGTCGCGGATGGCGCTCCACC GATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGAAAACTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTG                                                                                                       ]
[+] EMBL CB638518             [                    AACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTGCCCGAGGTCGACCTCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB665776             [                    AACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAA CTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB646674             [                               GAGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCAC GAGACCATCACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB643907             [                                AGCAACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCANGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGAACATCACGCCCAACTACTACGTCGGGAACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB639927             [                                    ACCAAACTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGTTGTTTATTCGACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAAGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB639940             [                                    ACCACCCTTTAACTGTACAACGTAGGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTACCAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGAGCCGGTCGTTGTTGGCGCCCTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGTCTACGCTAGCTGATCAGGCCCGCGCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB658988             [                                                                                                                                                                                                                           ACGACGGTGGCGATCGGGCGTCTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCGGCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTCCGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTGCCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTCGGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACCCTCGAGGCCGCCCGTG CCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTCGCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTCTGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATCCGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCGAGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACCATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTCCGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTGAAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB643908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tcaagaGGCGCTCCACCGGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTAGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGATTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGAGACGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGATGTCCTTTTGAATAATTCAGTGTTAATTAAAACAGAAAACTGTAATATTCCTGTTTAGTGTGTGTGGGAGGCTGCGTTCTTTCCACAAGTTTCCCAACCCCTTTCCCTGGTTTTCTGAGTGCACGCTTTTCAAACTGGTAAATGGTGTATTTTTTTGCAAAAAGTTTTTATCCGAAA]


>consensus_12056#0 CAACAAACCAACACACATCCAACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTA GGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTAC CAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCC CTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGT CTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCG GCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTC CGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTG CCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTC GGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACC CTCGAGGCCGCCCGTGCCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTC GCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTC TGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATC CGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCG AGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACC ATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTC CGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTG AAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTCCAG GAGGAGGACGAGCACGGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGACCATCGCC GGCAACGCGCTCAAGGCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGGCGTCGGAG CAGCTCAAGTTCGCGCTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGGTCAAGCCG TACATCCCGGACTTCCGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGCGGGCG GTGATCGACGAGCTGCAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGGCGTCGCGG ATGGCGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTAC GTCGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCC GGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACGACGACGGG CCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAG GAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGAAAACTGTA ATATTCCTGTTTAGTGTGTGTGTGAGGCTGCGTTCTTTCCACAAGTTTCCCAACCCCTTT CCCTGGTTTTCTGAGTGCACGCTTTTCAAACTGGTAAATGGTGTATTTTTTTGCAAAAAG TTTTTATCCGAAA



consensusID : consensus_12056#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 354
fasta sequence
                              [CCACGTACTCCCGCCATGTGGAGAAGGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGACGCATGCCCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATTTCGCCGGCGCGCGAGGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGGAAAACGTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGC]

[-] EMBL CB665777             [CCACGTACTCCCGCCATGTGGAGAAGGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGACGCATGCCCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATTTCGCCGGCGCGCGAGGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGGAAAACGTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGC]


>consensus_12056#1 CCACGTACTCCCGCCATGTGGAGAAGGCTCCACCGATTCGGGAACACGTCGAGCAGCTCG GTGTGGTACGAGCTGGCCTACGTCGAGGCCAAGGGACGCATGCCCCGCGGCGACCGCGTG TGGATGATCGGCTTCGGCTCCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATTTCG CCGGCGCGCGAGGACGACGGGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATT CCCGACGTGCTCAAGCACTAGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGT TAATTAAAACAGGAAAACGTGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12056#0      CAACAAACCAACACACATCCAACGAAAGGGTGAGCAACCAAACTTTAACTGTACAACGTA 60
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GGCATAGCGCGCGGCATGAGTATGGCTGCACGTTTTCTCGACAGCCTCAAGGCTACGTAC 120
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CAGTACTACCACCGTGCCATGGGCAACGTCCTCGTCGCCGTGCCGGCCGCTGCTGGCGCC 180
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CTCGTCACGGTGGCTCTCCTCGCGCCGGAGGCCGAGTCGACGACGGTGGCGATCGGGCGT 240
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CTACGCGAGCTGATCAGGCCCGCGCACCTCTTCCTGGCCGTCTTCCTCCCGGCCGCCGCG 300
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GCCACCGTGTACCTCGTGATGCGCCCGCGGGCGGTGTACCTCGTCGACTACGCGTGCTTC 360
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CGCACGGCGCCCAACTGCCGCGTCCCTTTCGCCACGTTCCTCGAGCACGCGAGGCAGGTG 420
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CCCACGCTCACCGAGCGCAGCGTGCGGTTCATGACGCGGCTGCTCGAGCGGTCGGGGCTC 480
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GGGGAGGAGACGTGCCTGCCGCCGGCGCACCACTACATCCCGACCTACAAGTACTGCACC 540
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CTCGAGGCCGCCCGTGCCGAGGTCGACCTCGTCGTCTTCTCCGCCGTCGACGAGCTCTTC 600
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GCCAAGACCGGCGTCAGCCCCGACGACGTCGACATACTCGTCGTCAACTGCAGCCTGTTC 660
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      TGCCCCACGCCGTCGTTCGTCGACATGATCGTGAACAGGTACAAGCTGCGGAGCGACATC 720
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CGCAGCATGCACCTGTCCGGCATGGGCTGCAGCGCGAGCCTCATCTCCATCGGCCTCGCG 780
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      AGGAACCTCCTGCAGGTGGCGCCGCATGGCGCGCGCGCGCTCGTCGTCTCCACGGAGACC 840
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      ATCACGCCCAACTACTACGTCGGGAACGAGCGCGCGATGCTCCTGCCCAACTGCCTCTTC 900
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CGCATGGGCGGCGCGGCCGCGCTGCTGTCGACGTCCCCGGCGAAGGCGCGGTTCCGGCTG 960
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      AAGCACGTCGTGCGCACGCTCACCGGCGCGGAGGACAGCGCGCACCACTGCGTGTTCCAG 1020
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GAGGAGGACGAGCACGGGAGCATCGGAATCAACCTTAGCAAGGATCTCATGACCATCGCC 1080
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GGCAACGCGCTCAAGGCCAACATCACGGCCATCGCGCCGCTCGTCCTGCCGGCGTCGGAG 1140
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      CAGCTCAAGTTCGCGCTCGCCTTCATCGCGCGGAAGGCGCTCAGCGGCAGGGTCAAGCCG 1200
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      TACATCCCGGACTTCCGCGCGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGCGGGCG 1260
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      GTGATCGACGAGCTGCAGCGCAGCCTCTGCCTCTCGGACGAGCAGGTGCAGGCGTC--GC 1318
consensus_12056#1      -----------------------------------------CCACGTACTCCCGCCATGT 19
                                                                 ** ** *   ** *  * 

consensus_12056#0      GGATGGCGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCT 1378
consensus_12056#1      GGAGAAGGCTCCACCGATTCGGGAACACGTCGAGCAGCTCGGTGTGGTACGAGCTGGCCT 79
                       ***    *****************************************************

consensus_12056#0      ACGTCGAGGCCAAGGGACGCATGCGCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCT 1438
consensus_12056#1      ACGTCGAGGCCAAGGGACGCATGCCCCGCGGCGACCGCGTGTGGATGATCGGCTTCGGCT 139
                       ************************ ***********************************

consensus_12056#0      CCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATCTCGCCGGCGCGCGACGACGACG 1498
consensus_12056#1      CCGGTTTCAAGTGCAACAGCGCGGCGTGGGAGTGCATTTCGCCGGCGCGCGAGGACGACG 199
                       ************************************* ************** *******

consensus_12056#0      GGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACT 1558
consensus_12056#1      GGCCGTGGGCCACGTCGATCCACAGGTATCCGGTGGACATTCCCGACGTGCTCAAGCACT 259
                       ************************************************************

consensus_12056#0      AGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGAAAAC-- 1616
consensus_12056#1      AGGAAGACACGGCATCGCTGTCCTTCTGAATAATTCAGTGTTAATTAAAACAGGAAAACG 319
                       ***************************************************** ***   

consensus_12056#0      TGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGCGTTCTTTCCACAAGTTTCCCAACCC 1676
consensus_12056#1      TGTAATATTCCTGTTTAGTGTGTGTGTGAGGCTGC------------------------- 354
                       ***********************************                         

consensus_12056#0      CTTTCCCTGGTTTTCTGAGTGCACGCTTTTCAAACTGGTAAATGGTGTATTTTTTTGCAA 1736
consensus_12056#1      ------------------------------------------------------------
                                                                                   

consensus_12056#0      AAAGTTTTTATCCGAAA 1753
consensus_12056#1      -----------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)