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Oryza sativa
cluster # 12068 cluster # 12068       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12068#0 length = 898 sequences # 1  
consensus_12068#1 length = 557 sequences # 5  
consensus_12068#2 length = 454 sequences # 3  
consensus_12068#3 length = 322 sequences # 1  

consensusID : consensus_12068#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 898
fasta sequence
                              [ATCTCCTCCCGTCCCATCCAACCCCGCCCCGTAATACCCCCCCTCCATAACACCCACTGCCACGAGCCCACGACCGCATTAGCATTAGCATTAGCATAAGGGAGGGAGGGAGGGAGGGATCATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGCGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGTGCGCCTCTCTCAATCTTCCCCGTCGTCCCTTCTTCCTCTTCCTGACATGTTATCACGTCACGCGCGTGCGTTCACTGCAGGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTGAGTACTAAGTACATTACGGCAGCATCGCACGGTGACATCGTCTCAGCGCGAGCGAGCTGTGGCCTTTCTGTGACCGTAAGGTTTGGTTTTCTCGGGGATTTATATAGCTATAGCCCTTGCACTCGCAGCATCGGCACGGCAGTGGGCCTGTAAAATTTTCCGCTGCTGCTGAAGCTCGCGAAGTGCAGCTTGTCAGTGTGGTGTTGTTGCACTCGCAGACAGTAAAAACGCCAAATGGGGTTACTGTACATGCCTCTGGGCTTGTGGTTTCCTCTGTATTTTTCTCTTGCTTTTTGTATGCTTAGGCACCGTTTAGATCCCGAACTTTTTTTTTTCAAACTTTTAACTTTTCTGTCACATCGAATTTTCTTACACACATAAATTTTTAAATTTTTCTTTACATCGTTCTAATTTCTTTAAACTTTTAATTTTGACGTGGAACTAAACACAGCCTTATTCTATTATGCCAAATGGAGTTCT]

[+] EMBL AK111010             [ATCTCCTCCCGTCCCATCCAACCCCGCCCCGTAATACCCCCCCTCCATAACACCCACTGCCACGAGCCCACGACCGCATTAGCATTAGCATTAGCATAAGGGAGGGAGGGAGGGAGGGATCATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGCGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGTGCGCCTCTCTCAATCTTCCCCGTCGTCCCTTCTTCCTCTTCCTGACATGTTATCACGTCACGCGCGTGCGTTCACTGCAGGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTGAGTACTAAGTACATTACGGCAGCATCGCACGGTGACATCGTCTCAGCGCGAGCGAGCTGTGGCCTTTCTGTGACCGTAAGGTTTGGTTTTCTCGGGGATTTATATAGCTATAGCCCTTGCACTCGCAGCATCGGCACGGCAGTGGGCCTGTAAAATTTTCCGCTGCTGCTGAAGCTCGCGAAGTGCAGCTTGTCAGTGTGGTGTTGTTGCACTCGCAGACAGTAAAAACGCCAAATGGGGTTACTGTACATGCCTCTGGGCTTGTGGTTTCCTCTGTATTTTTCTCTTGCTTTTTGTATGCTTAGGCACCGTTTAGATCCCGAACTTTTTTTTTTCAAACTTTTAACTTTTCTGTCACATCGAATTTTCTTACACACATAAATTTTTAAATTTTTCTTTACATCGTTCTAATTTCTTTAAACTTTTAATTTTGACGTGGAACTAAACACAGCCTTATTCTATTATGCCAAATGGAGTTCT]


>consensus_12068#0 ATCTCCTCCCGTCCCATCCAACCCCGCCCCGTAATACCCCCCCTCCATAACACCCACTGC CACGAGCCCACGACCGCATTAGCATTAGCATTAGCATAAGGGAGGGAGGGAGGGAGGGAT CATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCAGCC AGCGGCGTCGAGCTGCGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGTGCGC CTCTCTCAATCTTCCCCGTCGTCCCTTCTTCCTCTTCCTGACATGTTATCACGTCACGCG CGTGCGTTCACTGCAGGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGG TGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTGAG TACTAAGTACATTACGGCAGCATCGCACGGTGACATCGTCTCAGCGCGAGCGAGCTGTGG CCTTTCTGTGACCGTAAGGTTTGGTTTTCTCGGGGATTTATATAGCTATAGCCCTTGCAC TCGCAGCATCGGCACGGCAGTGGGCCTGTAAAATTTTCCGCTGCTGCTGAAGCTCGCGAA GTGCAGCTTGTCAGTGTGGTGTTGTTGCACTCGCAGACAGTAAAAACGCCAAATGGGGTT ACTGTACATGCCTCTGGGCTTGTGGTTTCCTCTGTATTTTTCTCTTGCTTTTTGTATGCT TAGGCACCGTTTAGATCCCGAACTTTTTTTTTTCAAACTTTTAACTTTTCTGTCACATCG AATTTTCTTACACACATAAATTTTTAAATTTTTCTTTACATCGTTCTAATTTCTTTAAAC TTTTAATTTTGACGTGGAACTAAACACAGCCTTATTCTATTATGCCAAATGGAGTTCT



consensusID : consensus_12068#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 557
fasta sequence
                              [ATTAGCATAAGGGAGGGAGGGAGGGAGGGATCATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGTCCC-TCGTGCCGATTCTGTCGA]

[+] EMBL AK063208             [ATTAGCATAAGGGAGGGAGGGAGGGAGGGATCATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGCGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGTCg                    ]
[+] EMBL BI306406             [                                                                         CGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGT                      ]
[+] EMBL BI306479             [                                                                         CGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGT                      ]
[-] EMBL BU672828             [                                                                          GTGACGCCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTA CTGTAATTTATTT  GCTCACGAGATGACTAATCATGTAAAAGCT  CCTTGTACGTTAGC GTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGTCCC TCGTGCCGATTCTGTCGA]
[+] EMBL CB967008             [                                                                                GCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGTCCCTTCGTGCC           ]


>consensus_12068#1 ATTAGCATAAGGGAGGGAGGGAGGGAGGGATCATTAGAGGAGGAGCACAGCACATGGCTG CCGCGGCCGCCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACG GCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGG AGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCTTCGCGG CCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCC GGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACA GACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACT CCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAG CTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATGCTTAACTTGTCCCT CGTGCCGATTCTGTCGA



consensusID : consensus_12068#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 454
fasta sequence
                              [GGAATAGCTGCGGCTGCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCG-CGACGGCGACAAT-GCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC]

[+] EMBL CB964880             [GGAATAGCTGCGGCTGCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCG CGACGGCGACAATGGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC]
[+] EMBL CB967160             [                        CGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCGCCGACGGCGACAAT GCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCCTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC]
[+] EMBL CB966081             [                            GGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGCG CGACGGCGACAAT GCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCG CTTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGGATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTCGGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCATGTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC]


>consensus_12068#2 GGAATAGCTGCGGCTGCACCGTGACGGCGGTGCAGCCAGCGGCGTCGAGCTGTGGCAAGC GCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGC CGCCGGAGGAGGAGGTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCC TTCGCGGCCAAGTACAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAG TGGGTCCGGGTACGCCCGTAAAGAGGATATGTGGCAACAGCCAGTCAAAATGTCAGGAGG ATGCACAGACCAATCCTGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAGTTACTC GGTTACTCCATGTCATGTGTTTAGCTGTAATTTATTTAAGCTCACGAGATGACTAATCAT GTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC



consensusID : consensus_12068#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence
                              [CTGGGCCGCCACCGTGACGGCGGTGCATGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCNCCGCGGCGGTAATCAGCGTGGCTCGGCGCTTCGCGGCCNGGTGCAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCCGGTACGCCCGTTTGCAGGATTTGTGGCTCCAGCCAGTCTCAATGTCTTGAGGATGCTCTGACCCCTCCTGTCCTTTTGATT]

[+] EMBL BI305775             [CTGGGCCGCCACCGTGACGGCGGTGCATGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAGGTGGAGGCCTTCCTCNCCGCGGCGGTAATCAGCGTGGCTCGGCGCTTCGCGGCCNGGTGCAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCCCGGTACGCCCGTTTGCAGGATTTGTGGCTCCAGCCAGTCTCAATGTCTTGAGGATGCTCTGACCCCTCCTGTCCTTTTGATT]


>consensus_12068#3 CTGGGCCGCCACCGTGACGGCGGTGCATGCCAGCGGCGTCGAGCTGTGGCAAGCGCGACG GCGACAATGCGTGCGTCGTCGACATGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGG AGGAGGAGGTGGAGGCCTTCCTCNCCGCGGCGGTAATCAGCGTGGCTCGGCGCTTCGCGG CCNGGTGCAACTATGACATCGTCAAGGACGCTCCGATGGATGGCCGGTACGAGTGGGTCC CGGTACGCCCGTTTGCAGGATTTGTGGCTCCAGCCAGTCTCAATGTCTTGAGGATGCTCT GACCCCTCCTGTCCTTTTGATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12068#1      ------------------------------------------------------------
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      ATCTCCTCCCGTCCCATCCAACCCCGCCCCGTAATACCCCCCCTCCATAACACCCACTGC 60
                                                                                   

consensus_12068#1      -----------------------------ATTAGCATAAGGGAGGGAGGGAGGGAGGGAT 31
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      CACGAGCCCACGACCGCATTAGCATTAGCATTAGCATAAGGGAGGGAGGGAGGGAGGGAT 120
                                                                                   

consensus_12068#1      CATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCA-GC 90
consensus_12068#2      ----------------------GGAATAGCTGCGGCTGC-ACCGTGACGGCGGTGCA-GC 36
consensus_12068#3      -----------------------------CTG-GGCCGCCACCGTGACGGCGGTGCATGC 30
consensus_12068#0      CATTAGAGGAGGAGCACAGCACATGGCTGCCGCGGCCGCCACCGTGACGGCGGTGCA-GC 179
                                                    * * *** ** ***************** **

consensus_12068#1      CAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATG---- 146
consensus_12068#2      CAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATG---- 92
consensus_12068#3      CAGCGGCGTCGAGCTGTGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATG---- 86
consensus_12068#0      CAGCGGCGTCGAGCTGCGGCAAGCGCGACGGCGACAATGCGTGCGTCGTCGACATGTGCG 239
                       **************** ***************************************    

consensus_12068#1      ------------------------------------------------------------
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      CCTCTCTCAATCTTCCCCGTCGTCCCTTCTTCCTCTTCCTGACATGTTATCACGTCACGC 299
                                                                                   

consensus_12068#1      ------------------CCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAG 188
consensus_12068#2      ------------------CCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAG 134
consensus_12068#3      ------------------CCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAG 128
consensus_12068#0      GCGTGCGTTCACTGCAGGCCCAGGAAGGCGAAGAAGGGGAGGTCGCCGCCGGAGGAGGAG 359
                                         ******************************************

consensus_12068#1      GTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGC-TTCGCGGCCAAGTA 247
consensus_12068#2      GTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGCCTTCGCGGCCAAGTA 194
consensus_12068#3      GTGGAGGCCTTCCTCNCCGCGGCGGTAATCAGCGTGGCTCGGCGC-TTCGCGGCCNGGTG 187
consensus_12068#0      GTGGAGGCCTTCCTCGCCGCGGCGGAGAGCAGCGTGGCGCGGCGC-TTCGCGGCCAAGTG 418
                       *************** *********  * ********* ****** *********  ** 

consensus_12068#1      CA-ACTATG-ACAT--CGTCAAGGACGCTCCGATGGATGGCC--GGTACGAGTGGGTCCG 301
consensus_12068#2      CA-ACTATG-ACAT--CGTCAAGGACGCTCCGATGGATGGCC--GGTACGAGTGGGTCCG 248
consensus_12068#3      CA-ACTATG-ACAT--CGTCAAGGACGCTCCGATGGATGGCC--GGTACGAGTGGGTCCC 241
consensus_12068#0      AGTACTAAGTACATTACGGCAGCATCGCACGGTGACATCGTCTCAGCGCGAGCGAGCTGT 478
                          **** * ****  ** **    *** * *    ** * *   *  **** * *    

consensus_12068#1      GGTACGCCCGTAAAGAGGATATGTGGCAA---CAGCCAGTCAAAATGTCAGGA-----GG 353
consensus_12068#2      GGTACGCCCGTAAAGAGGATATGTGGCAA---CAGCCAGTCAAAATGTCAGGA-----GG 300
consensus_12068#3      GGTACGCCCGTTTGCAGGATTTGTGGCTC---CAGCCAGTCTCAATGTCTTGA-----GG 293
consensus_12068#0      GGCCTTTCTGTGACCGTAAGGTTTGGTTTTCTCGGGGATTTATATAGCTATAGCCCTTGC 538
                       **     * **       *  * ***      * *  * *   *  *           * 

consensus_12068#1      ATGCACAG-ACCAATCC-----TGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAG 407
consensus_12068#2      ATGCACAG-ACCAATCC-----TGTCCTAATGAATCTTTTCTTTACCCATGTATATGTAG 354
consensus_12068#3      ATGCTCTG-ACCCCTCC-----TGTCCTTTTGATT------------------------- 322
consensus_12068#0      ACTCGCAGCATCGGCACGGCAGTGGGCCTGTAAAATTTTCCGCTGCTGCTGAAGCTCGCG 598
                       *  * * * * *    *     **  *   * *                           

consensus_12068#1      TTACTCGGTTACTCCATGTCATGT-GTTTAGCTGTAATTTATTTAAGCTCACGAGATGAC 466
consensus_12068#2      TTACTCGGTTACTCCATGTCATGT-GTTTAGCTGTAATTTATTTAAGCTCACGAGATGAC 413
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      AAGTGCAGCTTGTCAGTGTGGTGTTGTTGCACTCGCAGACAGTAAAAACGCCAAATGGGG 658
                                                                                   

consensus_12068#1      TAATCATGTAAAAGCTCACCTTGTACGTTAGCAGTAGATGCTTCGCCTGTAACGCATATG 526
consensus_12068#2      TAATCATGTAAAAAAAAAAAAAAAAAAACAGAGCGGGCCGC------------------- 454
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      TTACTGTACATGCCTCTGGGCTTGTGGTTTCCTCTGTATTTTTCTCTTGCTTTTTGTATG 718
                                                                                   

consensus_12068#1      CTTAACTTGTCCCTCGTGCCGATTCTGTCGA----------------------------- 557
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      CTTAGGCACCGTTTAGATCCCGAACTTTTTTTTTTCAAACTTTTAACTTTTCTGTCACAT 778
                                                                                   

consensus_12068#1      ------------------------------------------------------------
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      CGAATTTTCTTACACACATAAATTTTTAAATTTTTCTTTACATCGTTCTAATTTCTTTAA 838
                                                                                   

consensus_12068#1      ------------------------------------------------------------
consensus_12068#2      ------------------------------------------------------------
consensus_12068#3      ------------------------------------------------------------
consensus_12068#0      ACTTTTAATTTTGACGTGGAACTAAACACAGCCTTATTCTATTATGCCAAATGGAGTTCT 898
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)